RNA–Protein interactions for RNA: ENST00000594190.5

USHBP1-204, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-204ENST00000594190 ARHGEF10O15013 1369 aa22.63■■□□□ 1.21
USHBP1-204ENST00000594190 GPRASP1Q5JY77 1395 aa22.63■■□□□ 1.21
USHBP1-204ENST00000594190 UNC5CLQ8IV45 518 aa22.61■■□□□ 1.21
USHBP1-204ENST00000594190 CABLES1Q8TDN4 633 aa22.61■■□□□ 1.21
USHBP1-204ENST00000594190 GJD4Q96KN9 370 aaPredicted RBP22.61■■□□□ 1.21
USHBP1-204ENST00000594190 ROCK2O75116 1388 aaKnown RBP22.61■■□□□ 1.21
USHBP1-204ENST00000594190 CCDC125Q86Z20 511 aa22.6■■□□□ 1.21
USHBP1-204ENST00000594190 NBPF1Q3BBV0 1214 aa22.58■■□□□ 1.21
USHBP1-204ENST00000594190 CARD11Q9BXL7 1154 aa22.57■■□□□ 1.2
USHBP1-204ENST00000594190 COL14A1Q05707 1796 aaKnown RBP22.56■■□□□ 1.2
USHBP1-204ENST00000594190 USP47Q96K76 1375 aa22.55■■□□□ 1.2
USHBP1-204ENST00000594190 PHRF1Q9P1Y6 1649 aaKnown RBP22.55■■□□□ 1.2
USHBP1-204ENST00000594190 POLR3AO14802 1390 aaPredicted RBP22.54■■□□□ 1.2
USHBP1-204ENST00000594190 FAM83GA6ND36 823 aa22.54■■□□□ 1.2
USHBP1-204ENST00000594190 HSPA5P11021 654 aaKnown RBP22.54■■□□□ 1.2
USHBP1-204ENST00000594190 QRICH2Q9H0J4 1663 aa22.54■■□□□ 1.2
USHBP1-204ENST00000594190 NUDT16Q96DE0 195 aaKnown RBP22.53■■□□□ 1.2
USHBP1-204ENST00000594190 ONECUT3O60422 494 aaPredicted RBP22.52■■□□□ 1.2
USHBP1-204ENST00000594190 VPS72Q15906 364 aa22.52■■□□□ 1.2
USHBP1-204ENST00000594190 CDK19Q9BWU1 502 aa22.51■■□□□ 1.19
USHBP1-204ENST00000594190 SRCAPQ6ZRS2 3230 aa22.5■■□□□ 1.19
USHBP1-204ENST00000594190 PLEKHG3A1L390 1219 aa22.48■■□□□ 1.19
USHBP1-204ENST00000594190 LMOD2Q6P5Q4 547 aa22.48■■□□□ 1.19
USHBP1-204ENST00000594190 NGDNQ8NEJ9 315 aaKnown RBP22.47■■□□□ 1.19
USHBP1-204ENST00000594190 DIEXFQ68CQ4 756 aaKnown RBP22.46■■□□□ 1.19
USHBP1-204ENST00000594190 HAP1P54257 671 aaPredicted RBP22.45■■□□□ 1.18
USHBP1-204ENST00000594190 CCDC61Q9Y6R9 512 aa22.45■■□□□ 1.18
USHBP1-204ENST00000594190 ACEP12821 1306 aa22.45■■□□□ 1.18
USHBP1-204ENST00000594190 NRKQ7Z2Y5 1582 aa22.45■■□□□ 1.18
USHBP1-204ENST00000594190 SLC24A1O60721 1099 aa22.44■■□□□ 1.18
USHBP1-204ENST00000594190 THSD7AQ9UPZ6 1657 aa22.44■■□□□ 1.18
USHBP1-204ENST00000594190 BLMP54132 1417 aaPredicted RBP22.43■■□□□ 1.18
USHBP1-204ENST00000594190 CENPJQ9HC77 1338 aaPredicted RBP22.43■■□□□ 1.18
USHBP1-204ENST00000594190 PLEKHG5O94827 1062 aa22.43■■□□□ 1.18
USHBP1-204ENST00000594190 LMO7Q8WWI1 1683 aa22.42■■□□□ 1.18
USHBP1-204ENST00000594190 SF3B2Q13435 895 aaKnown RBP22.41■■□□□ 1.18
USHBP1-204ENST00000594190 SEPT12Q8IYM1 358 aa22.41■■□□□ 1.18
USHBP1-204ENST00000594190 BTG4Q9NY30 223 aa22.41■■□□□ 1.18
USHBP1-204ENST00000594190 PPIP5K1Q6PFW1 1433 aa22.39■■□□□ 1.17
USHBP1-204ENST00000594190 PAK3O75914 559 aaPredicted RBP22.38■■□□□ 1.17
USHBP1-204ENST00000594190 AKAP12Q02952 1782 aa22.38■■□□□ 1.17
USHBP1-204ENST00000594190 KIAA0232Q92628 1395 aa22.38■■□□□ 1.17
USHBP1-204ENST00000594190 USP19O94966 1318 aa22.37■■□□□ 1.17
USHBP1-204ENST00000594190 SPATA31A5Q5VU36 1347 aa22.37■■□□□ 1.17
USHBP1-204ENST00000594190 SPATA31A7Q8IWB4 1347 aa22.37■■□□□ 1.17
USHBP1-204ENST00000594190 ST20-MTHFSA0A0A6YYL1 179 aa22.37■■□□□ 1.17
USHBP1-204ENST00000594190 SSH2Q76I76 1423 aa22.37■■□□□ 1.17
USHBP1-204ENST00000594190 DEFB132Q7Z7B7 95 aa22.36■■□□□ 1.17
USHBP1-204ENST00000594190 CABP2Q9NPB3 220 aa22.35■■□□□ 1.17
USHBP1-204ENST00000594190 CCDC7Q96M83 1385 aa22.35■■□□□ 1.17
USHBP1-204ENST00000594190 PIK3C2AO00443 1686 aa22.34■■□□□ 1.17
USHBP1-204ENST00000594190 CAMTA1Q9Y6Y1 1673 aa22.34■■□□□ 1.17
USHBP1-204ENST00000594190 CCDC9Q9Y3X0 531 aaKnown RBP22.34■■□□□ 1.17
USHBP1-204ENST00000594190 BRD4O60885 1362 aaPredicted RBP22.34■■□□□ 1.17
USHBP1-204ENST00000594190 CPDO75976 1380 aa22.34■■□□□ 1.17
USHBP1-204ENST00000594190 USP6P35125 1406 aa22.33■■□□□ 1.17
USHBP1-204ENST00000594190 SLIT3O75094 1523 aa22.32■■□□□ 1.16
USHBP1-204ENST00000594190 KRT27Q7Z3Y8 459 aa22.32■■□□□ 1.16
USHBP1-204ENST00000594190 PRDM11Q9NQV5 511 aa22.32■■□□□ 1.16
USHBP1-204ENST00000594190 WASHC2AQ641Q2 1341 aa22.31■■□□□ 1.16
USHBP1-204ENST00000594190 COL18A1P39060 1754 aa22.31■■□□□ 1.16
USHBP1-204ENST00000594190 SBNO2Q9Y2G9 1366 aa22.31■■□□□ 1.16
USHBP1-204ENST00000594190 SRPK2P78362 688 aaKnown RBP22.31■■□□□ 1.16
USHBP1-204ENST00000594190 FAM98CQ17RN3 349 aaKnown RBP22.31■■□□□ 1.16
USHBP1-204ENST00000594190 NUTM2GQ5VZR2 741 aa22.31■■□□□ 1.16
USHBP1-204ENST00000594190 SPATA31A1Q5TZJ5 1347 aa22.31■■□□□ 1.16
USHBP1-204ENST00000594190 TNS1Q9HBL0 1735 aaKnown RBP22.3■■□□□ 1.16
USHBP1-204ENST00000594190 RGPD1P0DJD0 1748 aa22.29■■□□□ 1.16
USHBP1-204ENST00000594190 CHRNA2Q15822 529 aa22.29■■□□□ 1.16
USHBP1-204ENST00000594190 CDCA8Q53HL2 280 aa22.29■■□□□ 1.16
USHBP1-204ENST00000594190 TMF1P82094 1093 aa22.28■■□□□ 1.16
USHBP1-204ENST00000594190 ABTB2Q8N961 1025 aa22.28■■□□□ 1.16
USHBP1-204ENST00000594190 CABP1Q9NZU7 370 aa22.28■■□□□ 1.16
USHBP1-204ENST00000594190 KIF7Q2M1P5 1343 aa22.28■■□□□ 1.16
USHBP1-204ENST00000594190 A0A0G2JS52 829 aa22.27■■□□□ 1.16
USHBP1-204ENST00000594190 ZC3H6P61129 1189 aaKnown RBP22.27■■□□□ 1.16
USHBP1-204ENST00000594190 MYT1Q01538 1121 aa22.27■■□□□ 1.16
USHBP1-204ENST00000594190 MON2Q7Z3U7 1717 aa22.27■■□□□ 1.16
USHBP1-204ENST00000594190 TESK2Q96S53 571 aa22.27■■□□□ 1.16
USHBP1-204ENST00000594190 DDX10Q13206 875 aaKnown RBP22.26■■□□□ 1.15
USHBP1-204ENST00000594190 EVC2Q86UK5 1308 aa22.26■■□□□ 1.15
USHBP1-204ENST00000594190 CPSF1Q10570 1443 aaKnown RBP22.25■■□□□ 1.15
USHBP1-204ENST00000594190 LRP5O75197 1615 aa22.25■■□□□ 1.15
USHBP1-204ENST00000594190 GCP02774 474 aa22.25■■□□□ 1.15
USHBP1-204ENST00000594190 BAG6P46379 1132 aa22.25■■□□□ 1.15
USHBP1-204ENST00000594190 USP54Q70EL1 1684 aa22.24■■□□□ 1.15
USHBP1-204ENST00000594190 PARP4Q9UKK3 1724 aaKnown RBP22.23■■□□□ 1.15
USHBP1-204ENST00000594190 COL5A2P05997 1499 aaPredicted RBP22.23■■□□□ 1.15
USHBP1-204ENST00000594190 C11orf95C9JLR9 678 aaPredicted RBP22.23■■□□□ 1.15
USHBP1-204ENST00000594190 NLRP13Q86W25 1043 aa22.23■■□□□ 1.15
USHBP1-204ENST00000594190 RGPD5Q99666 1765 aa22.22■■□□□ 1.15
USHBP1-204ENST00000594190 WNK3Q9BYP7 1800 aa22.22■■□□□ 1.15
USHBP1-204ENST00000594190 BARGINQ6ZT62 677 aa22.21■■□□□ 1.15
USHBP1-204ENST00000594190 DISP2A7MBM2 1401 aa22.21■■□□□ 1.15
USHBP1-204ENST00000594190 CD163L1Q9NR16 1453 aa22.21■■□□□ 1.15
USHBP1-204ENST00000594190 PSDA5PKW4 1024 aaPredicted RBP22.2■■□□□ 1.14
USHBP1-204ENST00000594190 STRN4Q9NRL3 753 aa22.19■■□□□ 1.14
USHBP1-204ENST00000594190 AATKQ6ZMQ8 1374 aa22.18■■□□□ 1.14
USHBP1-204ENST00000594190 FAM182BQ5T319 152 aa22.18■■□□□ 1.14
USHBP1-204ENST00000594190 LARP1Q6PKG0 1096 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms