RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 PLEKHH1Q9ULM0 1364 aa18.48■□□□□ 0.55
VMP1-217ENST00000593168 TULP4Q9NRJ4 1543 aa18.48■□□□□ 0.55
VMP1-217ENST00000593168 MINK1Q8N4C8 1332 aaPredicted RBP18.48■□□□□ 0.55
VMP1-217ENST00000593168 PANK3Q9H999 370 aa18.47■□□□□ 0.55
VMP1-217ENST00000593168 SLIT2O94813 1529 aa18.47■□□□□ 0.55
VMP1-217ENST00000593168 USP32Q8NFA0 1604 aa18.46■□□□□ 0.55
VMP1-217ENST00000593168 RGPD8O14715 1765 aaPredicted RBP18.46■□□□□ 0.55
VMP1-217ENST00000593168 PER1O15534 1290 aaPredicted RBP18.46■□□□□ 0.55
VMP1-217ENST00000593168 KIF1AQ12756 1690 aa18.46■□□□□ 0.55
VMP1-217ENST00000593168 UNC5CLQ8IV45 518 aa18.45■□□□□ 0.54
VMP1-217ENST00000593168 SPATA31A3Q5VYP0 1347 aa18.44■□□□□ 0.54
VMP1-217ENST00000593168 CDK19Q9BWU1 502 aa18.43■□□□□ 0.54
VMP1-217ENST00000593168 CABP2Q9NPB3 220 aa18.43■□□□□ 0.54
VMP1-217ENST00000593168 PLCH1Q4KWH8 1693 aa18.43■□□□□ 0.54
VMP1-217ENST00000593168 BLMP54132 1417 aaPredicted RBP18.42■□□□□ 0.54
VMP1-217ENST00000593168 MYOM1P52179 1685 aa18.42■□□□□ 0.54
VMP1-217ENST00000593168 CCER2I3L3R5 266 aa18.42■□□□□ 0.54
VMP1-217ENST00000593168 SRPK2P78362 688 aaKnown RBP18.42■□□□□ 0.54
VMP1-217ENST00000593168 PRKRIP1Q9H875 184 aaPredicted RBP18.42■□□□□ 0.54
VMP1-217ENST00000593168 ABCA3Q99758 1704 aa18.41■□□□□ 0.54
VMP1-217ENST00000593168 WASLO00401 505 aaPredicted RBP18.41■□□□□ 0.54
VMP1-217ENST00000593168 NINLQ9Y2I6 1382 aa18.41■□□□□ 0.54
VMP1-217ENST00000593168 KRT28Q7Z3Y7 464 aa18.4■□□□□ 0.54
VMP1-217ENST00000593168 DEFB132Q7Z7B7 95 aa18.39■□□□□ 0.53
VMP1-217ENST00000593168 NWD2Q9ULI1 1742 aa18.39■□□□□ 0.53
VMP1-217ENST00000593168 KTN1Q86UP2 1357 aaKnown RBP18.39■□□□□ 0.53
VMP1-217ENST00000593168 TMC1Q8TDI8 760 aa18.38■□□□□ 0.53
VMP1-217ENST00000593168 SLC12A5Q9H2X9 1139 aa18.38■□□□□ 0.53
VMP1-217ENST00000593168 ADGRB2O60241 1585 aa18.38■□□□□ 0.53
VMP1-217ENST00000593168 KNSTRNQ9Y448 316 aa18.37■□□□□ 0.53
VMP1-217ENST00000593168 TNS3Q68CZ2 1445 aa18.37■□□□□ 0.53
VMP1-217ENST00000593168 RALBP1Q15311 655 aa18.36■□□□□ 0.53
VMP1-217ENST00000593168 SEPT12Q8IYM1 358 aa18.36■□□□□ 0.53
VMP1-217ENST00000593168 CABLES1Q8TDN4 633 aa18.36■□□□□ 0.53
VMP1-217ENST00000593168 NPC1L1Q9UHC9 1359 aa18.35■□□□□ 0.53
VMP1-217ENST00000593168 VPS72Q15906 364 aa18.35■□□□□ 0.53
VMP1-217ENST00000593168 ANKRD36BQ8N2N9 1353 aa18.34■□□□□ 0.53
VMP1-217ENST00000593168 PLEKHG5O94827 1062 aa18.34■□□□□ 0.53
VMP1-217ENST00000593168 CARD14Q9BXL6 1004 aa18.34■□□□□ 0.53
VMP1-217ENST00000593168 PHF8Q9UPP1 1060 aa18.34■□□□□ 0.53
VMP1-217ENST00000593168 LRP5O75197 1615 aa18.34■□□□□ 0.53
VMP1-217ENST00000593168 HAP1P54257 671 aaPredicted RBP18.33■□□□□ 0.52
VMP1-217ENST00000593168 AMER1Q5JTC6 1135 aaPredicted RBP18.33■□□□□ 0.52
VMP1-217ENST00000593168 NRAPQ86VF7 1730 aa18.32■□□□□ 0.52
VMP1-217ENST00000593168 ONECUT3O60422 494 aaPredicted RBP18.32■□□□□ 0.52
VMP1-217ENST00000593168 NUDT16Q96DE0 195 aaKnown RBP18.32■□□□□ 0.52
VMP1-217ENST00000593168 TERF2IPQ9NYB0 399 aa18.32■□□□□ 0.52
VMP1-217ENST00000593168 CCDC61Q9Y6R9 512 aa18.32■□□□□ 0.52
VMP1-217ENST00000593168 PSME1Q06323 249 aa18.31■□□□□ 0.52
VMP1-217ENST00000593168 SF3B2Q13435 895 aaKnown RBP18.31■□□□□ 0.52
VMP1-217ENST00000593168 CABP1Q9NZU7 370 aa18.31■□□□□ 0.52
VMP1-217ENST00000593168 CCDC9Q9Y3X0 531 aaKnown RBP18.31■□□□□ 0.52
VMP1-217ENST00000593168 SBNO1A3KN83 1393 aa18.3■□□□□ 0.52
VMP1-217ENST00000593168 PARD3Q8TEW0 1356 aa18.3■□□□□ 0.52
VMP1-217ENST00000593168 KRT27Q7Z3Y8 459 aa18.3■□□□□ 0.52
VMP1-217ENST00000593168 TRPM3Q9HCF6 1732 aaPredicted RBP18.29■□□□□ 0.52
VMP1-217ENST00000593168 LMOD2Q6P5Q4 547 aa18.29■□□□□ 0.52
VMP1-217ENST00000593168 ATP7BP35670 1465 aa18.28■□□□□ 0.52
VMP1-217ENST00000593168 FAM83GA6ND36 823 aa18.28■□□□□ 0.52
VMP1-217ENST00000593168 CC2D1BQ5T0F9 858 aaKnown RBP18.28■□□□□ 0.52
VMP1-217ENST00000593168 HDGFL2Q7Z4V5 671 aaPredicted RBP18.28■□□□□ 0.52
VMP1-217ENST00000593168 ARHGEF10O15013 1369 aa18.28■□□□□ 0.52
VMP1-217ENST00000593168 CD163L1Q9NR16 1453 aa18.27■□□□□ 0.52
VMP1-217ENST00000593168 PRR36Q9H6K5 1346 aa18.27■□□□□ 0.52
VMP1-217ENST00000593168 PPIP5K1Q6PFW1 1433 aa18.27■□□□□ 0.52
VMP1-217ENST00000593168 NSD3Q9BZ95 1437 aa18.27■□□□□ 0.52
VMP1-217ENST00000593168 A0A1W2PP64 1363 aa18.27■□□□□ 0.51
VMP1-217ENST00000593168 MYBBP1AQ9BQG0 1328 aaKnown RBP18.26■□□□□ 0.51
VMP1-217ENST00000593168 ALS2Q96Q42 1657 aa18.26■□□□□ 0.51
VMP1-217ENST00000593168 CNGB1Q14028 1251 aaPredicted RBP18.26■□□□□ 0.51
VMP1-217ENST00000593168 PLEKHG3A1L390 1219 aa18.25■□□□□ 0.51
VMP1-217ENST00000593168 PSDA5PKW4 1024 aaPredicted RBP18.25■□□□□ 0.51
VMP1-217ENST00000593168 PMFBP1Q8TBY8 1022 aa18.25■□□□□ 0.51
VMP1-217ENST00000593168 COL14A1Q05707 1796 aaKnown RBP18.25■□□□□ 0.51
VMP1-217ENST00000593168 CGNL1Q0VF96 1302 aa18.24■□□□□ 0.51
VMP1-217ENST00000593168 CPSF1Q10570 1443 aaKnown RBP18.24■□□□□ 0.51
VMP1-217ENST00000593168 ANKARQ7Z5J8 1434 aa18.24■□□□□ 0.51
VMP1-217ENST00000593168 RGPD1P0DJD0 1748 aa18.24■□□□□ 0.51
VMP1-217ENST00000593168 CRYBG1Q9Y4K1 1723 aa18.24■□□□□ 0.51
VMP1-217ENST00000593168 NSD2O96028 1365 aa18.23■□□□□ 0.51
VMP1-217ENST00000593168 A0A0G2JS52 829 aa18.23■□□□□ 0.51
VMP1-217ENST00000593168 MYT1Q01538 1121 aa18.23■□□□□ 0.51
VMP1-217ENST00000593168 FAM98CQ17RN3 349 aaKnown RBP18.23■□□□□ 0.51
VMP1-217ENST00000593168 ZNF692Q9BU19 519 aaPredicted RBP18.23■□□□□ 0.51
VMP1-217ENST00000593168 BAG6P46379 1132 aa18.22■□□□□ 0.51
VMP1-217ENST00000593168 BTG4Q9NY30 223 aa18.22■□□□□ 0.51
VMP1-217ENST00000593168 TOPAZ1Q8N9V7 1692 aa18.22■□□□□ 0.51
VMP1-217ENST00000593168 TNS1Q9HBL0 1735 aaKnown RBP18.21■□□□□ 0.51
VMP1-217ENST00000593168 BRD4O60885 1362 aaPredicted RBP18.21■□□□□ 0.51
VMP1-217ENST00000593168 CCDC184Q52MB2 194 aa18.21■□□□□ 0.51
VMP1-217ENST00000593168 NLRP13Q86W25 1043 aa18.21■□□□□ 0.51
VMP1-217ENST00000593168 MRS2Q9HD23 443 aa18.21■□□□□ 0.51
VMP1-217ENST00000593168 THSD7AQ9UPZ6 1657 aa18.2■□□□□ 0.5
VMP1-217ENST00000593168 FAM182BQ5T319 152 aa18.2■□□□□ 0.5
VMP1-217ENST00000593168 ITSN1Q15811 1721 aa18.19■□□□□ 0.5
VMP1-217ENST00000593168 EN1Q05925 392 aaPredicted RBP18.18■□□□□ 0.5
VMP1-217ENST00000593168 EDC4Q6P2E9 1401 aaKnown RBP18.17■□□□□ 0.5
VMP1-217ENST00000593168 PPP2R1AP30153 589 aa18.17■□□□□ 0.5
VMP1-217ENST00000593168 ACEP12821 1306 aa18.17■□□□□ 0.5
VMP1-217ENST00000593168 AKAP12Q02952 1782 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms