RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 PLPPR3Q6T4P5 718 aa17.65■□□□□ 0.42
CIRBP-242ENST00000593093 SCAF11Q99590 1463 aaKnown RBP17.65■□□□□ 0.42
CIRBP-242ENST00000593093 TRPM1Q7Z4N2 1603 aa17.65■□□□□ 0.42
CIRBP-242ENST00000593093 KANK1Q14678 1352 aa17.65■□□□□ 0.42
CIRBP-242ENST00000593093 ASXL2Q76L83 1435 aa17.64■□□□□ 0.42
CIRBP-242ENST00000593093 TBC1D9Q6ZT07 1266 aa17.64■□□□□ 0.42
CIRBP-242ENST00000593093 E9PCH4 1651 aa17.64■□□□□ 0.41
CIRBP-242ENST00000593093 MLECQ14165 292 aa17.64■□□□□ 0.41
CIRBP-242ENST00000593093 NLRP1Q9C000 1473 aa17.64■□□□□ 0.41
CIRBP-242ENST00000593093 HMOX1P09601 288 aa17.64■□□□□ 0.41
CIRBP-242ENST00000593093 TMPOP42166 694 aaKnown RBP17.64■□□□□ 0.41
CIRBP-242ENST00000593093 RAB3GAP1Q15042 981 aa17.64■□□□□ 0.41
CIRBP-242ENST00000593093 BAG4O95429 457 aaKnown RBP17.63■□□□□ 0.41
CIRBP-242ENST00000593093 ADGRL1O94910 1474 aa17.63■□□□□ 0.41
CIRBP-242ENST00000593093 ZNF692Q9BU19 519 aaPredicted RBP17.63■□□□□ 0.41
CIRBP-242ENST00000593093 CHMP4BQ9H444 224 aaKnown RBP17.62■□□□□ 0.41
CIRBP-242ENST00000593093 PKP1Q13835 747 aa17.62■□□□□ 0.41
CIRBP-242ENST00000593093 MYO5CQ9NQX4 1742 aa17.62■□□□□ 0.41
CIRBP-242ENST00000593093 PRDM15P57071 1507 aaPredicted RBP17.62■□□□□ 0.41
CIRBP-242ENST00000593093 PDCL3Q9H2J4 239 aa17.61■□□□□ 0.41
CIRBP-242ENST00000593093 ARHGEF5Q12774 1597 aa17.61■□□□□ 0.41
CIRBP-242ENST00000593093 UQCRHLA0A096LP55 91 aa17.61■□□□□ 0.41
CIRBP-242ENST00000593093 UQCRHP07919 91 aa17.61■□□□□ 0.41
CIRBP-242ENST00000593093 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.61■□□□□ 0.41
CIRBP-242ENST00000593093 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.61■□□□□ 0.41
CIRBP-242ENST00000593093 HDAC1Q13547 482 aaPredicted RBP17.6■□□□□ 0.41
CIRBP-242ENST00000593093 SMC5Q8IY18 1101 aa17.6■□□□□ 0.41
CIRBP-242ENST00000593093 NUCB1Q02818 461 aa17.6■□□□□ 0.41
CIRBP-242ENST00000593093 ZBTB40Q9NUA8 1239 aa17.59■□□□□ 0.41
CIRBP-242ENST00000593093 SYCE3A1L190 88 aa17.59■□□□□ 0.41
CIRBP-242ENST00000593093 CIZ1Q9ULV3 898 aaPredicted RBP17.59■□□□□ 0.41
CIRBP-242ENST00000593093 PRIM1P49642 420 aaKnown RBP17.58■□□□□ 0.41
CIRBP-242ENST00000593093 C16orf71Q8IYS4 520 aaPredicted RBP17.58■□□□□ 0.41
CIRBP-242ENST00000593093 CFAP65Q6ZU64 1925 aaKnown RBP17.58■□□□□ 0.41
CIRBP-242ENST00000593093 SHROOM2Q13796 1616 aa17.58■□□□□ 0.41
CIRBP-242ENST00000593093 ISY1Q9ULR0 285 aaKnown RBP17.58■□□□□ 0.4
CIRBP-242ENST00000593093 POLR3AO14802 1390 aaPredicted RBP17.57■□□□□ 0.4
CIRBP-242ENST00000593093 RBSNQ9H1K0 784 aa17.57■□□□□ 0.4
CIRBP-242ENST00000593093 RBM25P49756 843 aaKnown RBP17.56■□□□□ 0.4
CIRBP-242ENST00000593093 ZGPATQ8N5A5 531 aaKnown RBP17.56■□□□□ 0.4
CIRBP-242ENST00000593093 CLASP1Q7Z460 1538 aa17.56■□□□□ 0.4
CIRBP-242ENST00000593093 ZSCAN23Q3MJ62 389 aa17.56■□□□□ 0.4
CIRBP-242ENST00000593093 MINK1Q8N4C8 1332 aaPredicted RBP17.56■□□□□ 0.4
CIRBP-242ENST00000593093 SNX21Q969T3 373 aa17.56■□□□□ 0.4
CIRBP-242ENST00000593093 DUOX2Q9NRD8 1548 aa17.55■□□□□ 0.4
CIRBP-242ENST00000593093 ATAD2Q6PL18 1390 aa17.55■□□□□ 0.4
CIRBP-242ENST00000593093 SMARCA5O60264 1052 aaPredicted RBP17.55■□□□□ 0.4
CIRBP-242ENST00000593093 CDC45O75419 566 aa17.55■□□□□ 0.4
CIRBP-242ENST00000593093 KIF16BQ96L93 1317 aa17.55■□□□□ 0.4
CIRBP-242ENST00000593093 FAM177BA6PVY3 158 aa17.55■□□□□ 0.4
CIRBP-242ENST00000593093 PTMSP20962 102 aa17.55■□□□□ 0.4
CIRBP-242ENST00000593093 TSC1Q92574 1164 aa17.55■□□□□ 0.4
CIRBP-242ENST00000593093 CD109Q6YHK3 1445 aa17.54■□□□□ 0.4
CIRBP-242ENST00000593093 KLHL40Q2TBA0 621 aa17.54■□□□□ 0.4
CIRBP-242ENST00000593093 OFD1O75665 1012 aa17.54■□□□□ 0.4
CIRBP-242ENST00000593093 PRKAR2BP31323 418 aa17.54■□□□□ 0.4
CIRBP-242ENST00000593093 BMP2KLQ5H9B9 411 aa17.54■□□□□ 0.4
CIRBP-242ENST00000593093 PRDM4Q9UKN5 801 aa17.54■□□□□ 0.4
CIRBP-242ENST00000593093 TRIM35Q9UPQ4 493 aa17.53■□□□□ 0.4
CIRBP-242ENST00000593093 DIAPH1O60610 1272 aaKnown RBP17.53■□□□□ 0.4
CIRBP-242ENST00000593093 TSPYL6Q8N831 410 aa17.53■□□□□ 0.4
CIRBP-242ENST00000593093 ZNF830Q96NB3 372 aaPredicted RBP17.53■□□□□ 0.4
CIRBP-242ENST00000593093 STAG3Q9UJ98 1225 aa17.53■□□□□ 0.4
CIRBP-242ENST00000593093 PAXIP1Q6ZW49 1069 aaPredicted RBP17.52■□□□□ 0.4
CIRBP-242ENST00000593093 GDPD2Q9HCC8 539 aa17.52■□□□□ 0.4
CIRBP-242ENST00000593093 NAP1L2Q9ULW6 460 aaPredicted RBP17.52■□□□□ 0.4
CIRBP-242ENST00000593093 FAM69CQ0P6D2 419 aa17.52■□□□□ 0.39
CIRBP-242ENST00000593093 JARID2Q92833 1246 aaPredicted RBP17.52■□□□□ 0.39
CIRBP-242ENST00000593093 PLCD3Q8N3E9 789 aa17.51■□□□□ 0.39
CIRBP-242ENST00000593093 OTUD7AQ8TE49 926 aaPredicted RBP17.51■□□□□ 0.39
CIRBP-242ENST00000593093 KIF2CQ99661 725 aa17.51■□□□□ 0.39
CIRBP-242ENST00000593093 NUCB2P80303 420 aa17.51■□□□□ 0.39
CIRBP-242ENST00000593093 MAPK8IP2Q13387 824 aaPredicted RBP17.51■□□□□ 0.39
CIRBP-242ENST00000593093 NPC1L1Q9UHC9 1359 aa17.51■□□□□ 0.39
CIRBP-242ENST00000593093 ABCC1P33527 1531 aa17.5■□□□□ 0.39
CIRBP-242ENST00000593093 SOX12O15370 315 aa17.5■□□□□ 0.39
CIRBP-242ENST00000593093 ST18O60284 1047 aa17.5■□□□□ 0.39
CIRBP-242ENST00000593093 CASC1Q6TDU7 716 aa17.5■□□□□ 0.39
CIRBP-242ENST00000593093 UGGT1Q9NYU2 1555 aa17.5■□□□□ 0.39
CIRBP-242ENST00000593093 DTNBO60941 627 aa17.49■□□□□ 0.39
CIRBP-242ENST00000593093 DCTN1Q14203 1278 aa17.49■□□□□ 0.39
CIRBP-242ENST00000593093 SLC4A10Q6U841 1118 aa17.49■□□□□ 0.39
CIRBP-242ENST00000593093 EVC2Q86UK5 1308 aa17.49■□□□□ 0.39
CIRBP-242ENST00000593093 NEK4P51957 841 aa17.48■□□□□ 0.39
CIRBP-242ENST00000593093 TSHZ3Q63HK5 1081 aa17.48■□□□□ 0.39
CIRBP-242ENST00000593093 CCDC27Q2M243 656 aa17.48■□□□□ 0.39
CIRBP-242ENST00000593093 GCC1Q96CN9 775 aa17.47■□□□□ 0.39
CIRBP-242ENST00000593093 EIF2AK4Q9P2K8 1649 aaKnown RBP17.47■□□□□ 0.39
CIRBP-242ENST00000593093 UHRF1BP1LA0JNW5 1464 aa17.47■□□□□ 0.39
CIRBP-242ENST00000593093 RABEP1Q15276 862 aa17.47■□□□□ 0.39
CIRBP-242ENST00000593093 ERVK-7P63135 1459 aa17.47■□□□□ 0.39
CIRBP-242ENST00000593093 C17orf53Q8N3J3 647 aaPredicted RBP17.46■□□□□ 0.39
CIRBP-242ENST00000593093 PPP1R9BQ96SB3 815 aa17.46■□□□□ 0.39
CIRBP-242ENST00000593093 NSFL1CQ9UNZ2 370 aaKnown RBP17.46■□□□□ 0.39
CIRBP-242ENST00000593093 VGLL3A8MV65 326 aa17.46■□□□□ 0.38
CIRBP-242ENST00000593093 RTEL1-TNFRSF6BF6WH68 1400 aa17.45■□□□□ 0.38
CIRBP-242ENST00000593093 LMBRD1Q9NUN5 540 aa17.45■□□□□ 0.38
CIRBP-242ENST00000593093 ZBTB7BO15156 539 aaPredicted RBP17.45■□□□□ 0.38
CIRBP-242ENST00000593093 DDIT3P35638 169 aa17.45■□□□□ 0.38
CIRBP-242ENST00000593093 PHF23Q9BUL5 403 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms