RNA–Protein interactions for RNA: ENST00000592960.1

PKN1-215, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-215ENST00000592960 TRPM3Q9HCF6 1732 aaPredicted RBP21.78■■□□□ 1.08
PKN1-215ENST00000592960 WASLO00401 505 aaPredicted RBP21.78■■□□□ 1.08
PKN1-215ENST00000592960 HIRIP3Q9BW71 556 aaPredicted RBP21.78■■□□□ 1.08
PKN1-215ENST00000592960 NRAPQ86VF7 1730 aa21.77■■□□□ 1.08
PKN1-215ENST00000592960 PSDA5PKW4 1024 aaPredicted RBP21.77■■□□□ 1.08
PKN1-215ENST00000592960 COL14A1Q05707 1796 aaKnown RBP21.76■■□□□ 1.07
PKN1-215ENST00000592960 ALS2Q96Q42 1657 aa21.76■■□□□ 1.07
PKN1-215ENST00000592960 EN1Q05925 392 aaPredicted RBP21.76■■□□□ 1.07
PKN1-215ENST00000592960 STAC3Q96MF2 364 aa21.76■■□□□ 1.07
PKN1-215ENST00000592960 MINK1Q8N4C8 1332 aaPredicted RBP21.76■■□□□ 1.07
PKN1-215ENST00000592960 DISP2A7MBM2 1401 aa21.74■■□□□ 1.07
PKN1-215ENST00000592960 NGDNQ8NEJ9 315 aaKnown RBP21.74■■□□□ 1.07
PKN1-215ENST00000592960 TULP4Q9NRJ4 1543 aa21.74■■□□□ 1.07
PKN1-215ENST00000592960 CLSPNQ9HAW4 1339 aa21.73■■□□□ 1.07
PKN1-215ENST00000592960 FAM182BQ5T319 152 aa21.72■■□□□ 1.07
PKN1-215ENST00000592960 PRDM11Q9NQV5 511 aa21.72■■□□□ 1.07
PKN1-215ENST00000592960 SPATA31A1Q5TZJ5 1347 aa21.71■■□□□ 1.07
PKN1-215ENST00000592960 PAK3O75914 559 aaPredicted RBP21.7■■□□□ 1.06
PKN1-215ENST00000592960 ZEB1P37275 1124 aaPredicted RBP21.7■■□□□ 1.06
PKN1-215ENST00000592960 DCAF11Q8TEB1 546 aa21.7■■□□□ 1.06
PKN1-215ENST00000592960 KDM2AQ9Y2K7 1162 aa21.69■■□□□ 1.06
PKN1-215ENST00000592960 THSD7AQ9UPZ6 1657 aa21.69■■□□□ 1.06
PKN1-215ENST00000592960 R3HDM1Q15032 1099 aaKnown RBP21.68■■□□□ 1.06
PKN1-215ENST00000592960 FAM196AQ6ZSG2 479 aa21.68■■□□□ 1.06
PKN1-215ENST00000592960 NUDT16Q96DE0 195 aaKnown RBP21.68■■□□□ 1.06
PKN1-215ENST00000592960 CAMKK2Q96RR4 588 aa21.68■■□□□ 1.06
PKN1-215ENST00000592960 RGPD1P0DJD0 1748 aa21.68■■□□□ 1.06
PKN1-215ENST00000592960 KIAA0232Q92628 1395 aa21.67■■□□□ 1.06
PKN1-215ENST00000592960 CRYBG1Q9Y4K1 1723 aa21.66■■□□□ 1.06
PKN1-215ENST00000592960 EZH2Q15910 746 aaKnown RBP21.66■■□□□ 1.06
PKN1-215ENST00000592960 CHRNA2Q15822 529 aa21.64■■□□□ 1.05
PKN1-215ENST00000592960 TRIM37O94972 964 aa21.63■■□□□ 1.05
PKN1-215ENST00000592960 BARGINQ6ZT62 677 aa21.63■■□□□ 1.05
PKN1-215ENST00000592960 PARD3Q8TEW0 1356 aa21.62■■□□□ 1.05
PKN1-215ENST00000592960 NBPF8Q3BBV2 869 aa21.62■■□□□ 1.05
PKN1-215ENST00000592960 ATP7BP35670 1465 aa21.62■■□□□ 1.05
PKN1-215ENST00000592960 POLR3AO14802 1390 aaPredicted RBP21.61■■□□□ 1.05
PKN1-215ENST00000592960 ZC3H6P61129 1189 aaKnown RBP21.61■■□□□ 1.05
PKN1-215ENST00000592960 CDK19Q9BWU1 502 aa21.61■■□□□ 1.05
PKN1-215ENST00000592960 STRN4Q9NRL3 753 aa21.61■■□□□ 1.05
PKN1-215ENST00000592960 TNS1Q9HBL0 1735 aaKnown RBP21.6■■□□□ 1.05
PKN1-215ENST00000592960 PLEKHG3A1L390 1219 aa21.6■■□□□ 1.05
PKN1-215ENST00000592960 APBA3O96018 575 aa21.6■■□□□ 1.05
PKN1-215ENST00000592960 CCDC61Q9Y6R9 512 aa21.6■■□□□ 1.05
PKN1-215ENST00000592960 KIAA1210Q9ULL0 1709 aa21.59■■□□□ 1.05
PKN1-215ENST00000592960 ACEP12821 1306 aa21.58■■□□□ 1.05
PKN1-215ENST00000592960 EVA1CP58658 441 aa21.58■■□□□ 1.05
PKN1-215ENST00000592960 PDE3BQ13370 1112 aa21.57■■□□□ 1.04
PKN1-215ENST00000592960 SSH2Q76I76 1423 aa21.56■■□□□ 1.04
PKN1-215ENST00000592960 ITSN1Q15811 1721 aa21.56■■□□□ 1.04
PKN1-215ENST00000592960 ARHGEF28Q8N1W1 1705 aaKnown RBP21.56■■□□□ 1.04
PKN1-215ENST00000592960 NUTM2GQ5VZR2 741 aa21.56■■□□□ 1.04
PKN1-215ENST00000592960 CPDO75976 1380 aa21.56■■□□□ 1.04
PKN1-215ENST00000592960 TCP11L2Q8N4U5 519 aa21.55■■□□□ 1.04
PKN1-215ENST00000592960 LARP1Q6PKG0 1096 aaKnown RBP21.54■■□□□ 1.04
PKN1-215ENST00000592960 ABTB2Q8N961 1025 aa21.54■■□□□ 1.04
PKN1-215ENST00000592960 USP35Q9P2H5 1018 aa21.54■■□□□ 1.04
PKN1-215ENST00000592960 THRAP3Q9Y2W1 955 aaKnown RBP21.54■■□□□ 1.04
PKN1-215ENST00000592960 PHRF1Q9P1Y6 1649 aaKnown RBP21.54■■□□□ 1.04
PKN1-215ENST00000592960 USP19O94966 1318 aa21.54■■□□□ 1.04
PKN1-215ENST00000592960 CAMTA1Q9Y6Y1 1673 aa21.53■■□□□ 1.04
PKN1-215ENST00000592960 C11orf95C9JLR9 678 aaPredicted RBP21.51■■□□□ 1.03
PKN1-215ENST00000592960 NBPF14Q5TI25 921 aa21.51■■□□□ 1.03
PKN1-215ENST00000592960 SIN3AQ96ST3 1273 aa21.51■■□□□ 1.03
PKN1-215ENST00000592960 GCP02774 474 aa21.5■■□□□ 1.03
PKN1-215ENST00000592960 NLRP13Q86W25 1043 aa21.5■■□□□ 1.03
PKN1-215ENST00000592960 NEUROD1Q13562 356 aa21.49■■□□□ 1.03
PKN1-215ENST00000592960 BRD4O60885 1362 aaPredicted RBP21.48■■□□□ 1.03
PKN1-215ENST00000592960 TOPAZ1Q8N9V7 1692 aa21.47■■□□□ 1.03
PKN1-215ENST00000592960 LMO7Q8WWI1 1683 aa21.47■■□□□ 1.03
PKN1-215ENST00000592960 NRKQ7Z2Y5 1582 aa21.46■■□□□ 1.03
PKN1-215ENST00000592960 RREB1Q92766 1687 aa21.45■■□□□ 1.02
PKN1-215ENST00000592960 NBPF1Q3BBV0 1214 aa21.44■■□□□ 1.02
PKN1-215ENST00000592960 PLSCR1O15162 318 aa21.43■■□□□ 1.02
PKN1-215ENST00000592960 SPON1Q9HCB6 807 aa21.43■■□□□ 1.02
PKN1-215ENST00000592960 COL5A2P05997 1499 aaPredicted RBP21.43■■□□□ 1.02
PKN1-215ENST00000592960 KCNQ2O43526 872 aa21.42■■□□□ 1.02
PKN1-215ENST00000592960 NUP188Q5SRE5 1749 aa21.42■■□□□ 1.02
PKN1-215ENST00000592960 CRB1P82279 1406 aa21.41■■□□□ 1.02
PKN1-215ENST00000592960 PPIP5K1Q6PFW1 1433 aa21.41■■□□□ 1.02
PKN1-215ENST00000592960 AATKQ6ZMQ8 1374 aa21.41■■□□□ 1.02
PKN1-215ENST00000592960 SRPK2P78362 688 aaKnown RBP21.41■■□□□ 1.02
PKN1-215ENST00000592960 TRPM1Q7Z4N2 1603 aa21.4■■□□□ 1.02
PKN1-215ENST00000592960 TONSLQ96HA7 1378 aa21.4■■□□□ 1.02
PKN1-215ENST00000592960 CENPJQ9HC77 1338 aaPredicted RBP21.39■■□□□ 1.01
PKN1-215ENST00000592960 PARP4Q9UKK3 1724 aaKnown RBP21.39■■□□□ 1.01
PKN1-215ENST00000592960 YY1P25490 414 aa21.39■■□□□ 1.01
PKN1-215ENST00000592960 CABP2Q9NPB3 220 aa21.39■■□□□ 1.01
PKN1-215ENST00000592960 TIMELESSQ9UNS1 1208 aa21.39■■□□□ 1.01
PKN1-215ENST00000592960 NLRP6P59044 892 aa21.38■■□□□ 1.01
PKN1-215ENST00000592960 CABP1Q9NZU7 370 aa21.38■■□□□ 1.01
PKN1-215ENST00000592960 OVOS2A0A0G2JMS6 1433 aa21.38■■□□□ 1.01
PKN1-215ENST00000592960 OVOS2A0A0J9YW53 1432 aa21.38■■□□□ 1.01
PKN1-215ENST00000592960 OVOS2Q6IE36 1432 aa21.38■■□□□ 1.01
PKN1-215ENST00000592960 BCL11BQ9C0K0 894 aaPredicted RBP21.36■■□□□ 1.01
PKN1-215ENST00000592960 NINLQ9Y2I6 1382 aa21.36■■□□□ 1.01
PKN1-215ENST00000592960 PEAK1Q9H792 1746 aa21.35■■□□□ 1.01
PKN1-215ENST00000592960 DDB1Q16531 1140 aa21.35■■□□□ 1.01
PKN1-215ENST00000592960 PPP1R1BQ9UD71 204 aaPredicted RBP21.35■■□□□ 1.01
PKN1-215ENST00000592960 USP6P35125 1406 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms