RNA–Protein interactions for RNA: ENST00000592928.2

RAD51D-223, Transcript of RAD51 paralog D, humanhuman

TSL 1 (best)

Gene RAD51D, Length 207 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51D-223ENST00000592928 COL14A1Q05707 1796 aaKnown RBP13.85□□□□□ -0.19
RAD51D-223ENST00000592928 TONSLQ96HA7 1378 aa13.84□□□□□ -0.19
RAD51D-223ENST00000592928 SBNO2Q9Y2G9 1366 aa13.84□□□□□ -0.19
RAD51D-223ENST00000592928 PPIP5K1Q6PFW1 1433 aa13.84□□□□□ -0.19
RAD51D-223ENST00000592928 LMOD2Q6P5Q4 547 aa13.84□□□□□ -0.19
RAD51D-223ENST00000592928 UNC5CLQ8IV45 518 aa13.84□□□□□ -0.19
RAD51D-223ENST00000592928 CABLES1Q8TDN4 633 aa13.84□□□□□ -0.19
RAD51D-223ENST00000592928 BRD4O60885 1362 aaPredicted RBP13.83□□□□□ -0.19
RAD51D-223ENST00000592928 UPF1Q92900 1129 aaKnown RBP eCLIP13.83□□□□□ -0.2
RAD51D-223ENST00000592928 ACEP12821 1306 aa13.83□□□□□ -0.2
RAD51D-223ENST00000592928 SRPK2P78362 688 aaKnown RBP13.82□□□□□ -0.2
RAD51D-223ENST00000592928 NBPF8Q3BBV2 869 aa13.82□□□□□ -0.2
RAD51D-223ENST00000592928 GJD4Q96KN9 370 aaPredicted RBP13.82□□□□□ -0.2
RAD51D-223ENST00000592928 NRKQ7Z2Y5 1582 aa13.82□□□□□ -0.2
RAD51D-223ENST00000592928 ATAD2Q6PL18 1390 aa13.81□□□□□ -0.2
RAD51D-223ENST00000592928 PAK3O75914 559 aaPredicted RBP13.8□□□□□ -0.2
RAD51D-223ENST00000592928 VPS72Q15906 364 aa13.8□□□□□ -0.2
RAD51D-223ENST00000592928 CABP2Q9NPB3 220 aa13.8□□□□□ -0.2
RAD51D-223ENST00000592928 EVC2Q86UK5 1308 aa13.8□□□□□ -0.2
RAD51D-223ENST00000592928 USP6P35125 1406 aa13.8□□□□□ -0.2
RAD51D-223ENST00000592928 USP19O94966 1318 aa13.78□□□□□ -0.2
RAD51D-223ENST00000592928 FAM83GA6ND36 823 aa13.77□□□□□ -0.21
RAD51D-223ENST00000592928 PLEKHG5O94827 1062 aa13.77□□□□□ -0.21
RAD51D-223ENST00000592928 AKAP12Q02952 1782 aa13.77□□□□□ -0.21
RAD51D-223ENST00000592928 SSH2Q76I76 1423 aa13.77□□□□□ -0.21
RAD51D-223ENST00000592928 SLIT3O75094 1523 aa13.76□□□□□ -0.21
RAD51D-223ENST00000592928 CARD11Q9BXL7 1154 aa13.76□□□□□ -0.21
RAD51D-223ENST00000592928 PIK3C2AO00443 1686 aa13.75□□□□□ -0.21
RAD51D-223ENST00000592928 LMO7Q8WWI1 1683 aa13.75□□□□□ -0.21
RAD51D-223ENST00000592928 CPDO75976 1380 aa13.75□□□□□ -0.21
RAD51D-223ENST00000592928 KIAA0232Q92628 1395 aa13.75□□□□□ -0.21
RAD51D-223ENST00000592928 PRDM11Q9NQV5 511 aa13.75□□□□□ -0.21
RAD51D-223ENST00000592928 MON2Q7Z3U7 1717 aa13.75□□□□□ -0.21
RAD51D-223ENST00000592928 BRWD3Q6RI45 1802 aa13.74□□□□□ -0.21
RAD51D-223ENST00000592928 BTG4Q9NY30 223 aa13.74□□□□□ -0.21
RAD51D-223ENST00000592928 CABP1Q9NZU7 370 aa13.74□□□□□ -0.21
RAD51D-223ENST00000592928 THSD7AQ9UPZ6 1657 aa13.74□□□□□ -0.21
RAD51D-223ENST00000592928 CPSF1Q10570 1443 aaKnown RBP13.73□□□□□ -0.21
RAD51D-223ENST00000592928 ONECUT3O60422 494 aaPredicted RBP13.73□□□□□ -0.21
RAD51D-223ENST00000592928 ABTB2Q8N961 1025 aa13.73□□□□□ -0.21
RAD51D-223ENST00000592928 EP400Q96L91 3159 aa13.73□□□□□ -0.21
RAD51D-223ENST00000592928 CLSPNQ9HAW4 1339 aa13.72□□□□□ -0.21
RAD51D-223ENST00000592928 NLRP13Q86W25 1043 aa13.72□□□□□ -0.21
RAD51D-223ENST00000592928 USP54Q70EL1 1684 aa13.72□□□□□ -0.21
RAD51D-223ENST00000592928 SPATA31A5Q5VU36 1347 aa13.71□□□□□ -0.21
RAD51D-223ENST00000592928 SPATA31A7Q8IWB4 1347 aa13.71□□□□□ -0.21
RAD51D-223ENST00000592928 NUTM2GQ5VZR2 741 aa13.71□□□□□ -0.21
RAD51D-223ENST00000592928 CCDC9Q9Y3X0 531 aaKnown RBP13.71□□□□□ -0.21
RAD51D-223ENST00000592928 SEPT12Q8IYM1 358 aa13.7□□□□□ -0.22
RAD51D-223ENST00000592928 ZNF692Q9BU19 519 aaPredicted RBP13.7□□□□□ -0.22
RAD51D-223ENST00000592928 CAMTA1Q9Y6Y1 1673 aa13.69□□□□□ -0.22
RAD51D-223ENST00000592928 TTC21AQ8NDW8 1320 aa13.69□□□□□ -0.22
RAD51D-223ENST00000592928 CD163L1Q9NR16 1453 aa13.69□□□□□ -0.22
RAD51D-223ENST00000592928 ZC3H6P61129 1189 aaKnown RBP13.69□□□□□ -0.22
RAD51D-223ENST00000592928 PUS7Q96PZ0 661 aaKnown RBP13.69□□□□□ -0.22
RAD51D-223ENST00000592928 BLMP54132 1417 aaPredicted RBP13.69□□□□□ -0.22
RAD51D-223ENST00000592928 TTC21BQ7Z4L5 1316 aa13.68□□□□□ -0.22
RAD51D-223ENST00000592928 GCP02774 474 aa13.68□□□□□ -0.22
RAD51D-223ENST00000592928 CHRNA2Q15822 529 aa13.68□□□□□ -0.22
RAD51D-223ENST00000592928 CCDC125Q86Z20 511 aa13.68□□□□□ -0.22
RAD51D-223ENST00000592928 COL5A2P05997 1499 aaPredicted RBP13.67□□□□□ -0.22
RAD51D-223ENST00000592928 SPATA31A1Q5TZJ5 1347 aa13.67□□□□□ -0.22
RAD51D-223ENST00000592928 FAM98CQ17RN3 349 aaKnown RBP13.67□□□□□ -0.22
RAD51D-223ENST00000592928 TIMELESSQ9UNS1 1208 aa13.67□□□□□ -0.22
RAD51D-223ENST00000592928 ABCC6O95255 1503 aa13.67□□□□□ -0.22
RAD51D-223ENST00000592928 KTN1Q86UP2 1357 aaKnown RBP13.67□□□□□ -0.22
RAD51D-223ENST00000592928 NINLQ9Y2I6 1382 aa13.67□□□□□ -0.22
RAD51D-223ENST00000592928 COL18A1P39060 1754 aa13.66□□□□□ -0.22
RAD51D-223ENST00000592928 NFAT5O94916 1531 aa13.66□□□□□ -0.22
RAD51D-223ENST00000592928 SLC24A1O60721 1099 aa13.66□□□□□ -0.22
RAD51D-223ENST00000592928 NLRP6P59044 892 aa13.66□□□□□ -0.22
RAD51D-223ENST00000592928 KRT27Q7Z3Y8 459 aa13.66□□□□□ -0.22
RAD51D-223ENST00000592928 TESK2Q96S53 571 aa13.66□□□□□ -0.22
RAD51D-223ENST00000592928 AATKQ6ZMQ8 1374 aa13.66□□□□□ -0.22
RAD51D-223ENST00000592928 USP31Q70CQ4 1352 aa13.65□□□□□ -0.22
RAD51D-223ENST00000592928 USP47Q96K76 1375 aa13.65□□□□□ -0.22
RAD51D-223ENST00000592928 EDC4Q6P2E9 1401 aaKnown RBP13.64□□□□□ -0.23
RAD51D-223ENST00000592928 A0A1W2PP64 1363 aa13.63□□□□□ -0.23
RAD51D-223ENST00000592928 ST20-MTHFSA0A0A6YYL1 179 aa13.63□□□□□ -0.23
RAD51D-223ENST00000592928 A0A0G2JS52 829 aa13.63□□□□□ -0.23
RAD51D-223ENST00000592928 MYT1Q01538 1121 aa13.63□□□□□ -0.23
RAD51D-223ENST00000592928 BARGINQ6ZT62 677 aa13.63□□□□□ -0.23
RAD51D-223ENST00000592928 KCNH5Q8NCM2 988 aa13.63□□□□□ -0.23
RAD51D-223ENST00000592928 STRN4Q9NRL3 753 aa13.63□□□□□ -0.23
RAD51D-223ENST00000592928 PARP4Q9UKK3 1724 aaKnown RBP13.63□□□□□ -0.23
RAD51D-223ENST00000592928 CRB1P82279 1406 aa13.63□□□□□ -0.23
RAD51D-223ENST00000592928 RGPD1P0DJD0 1748 aa13.62□□□□□ -0.23
RAD51D-223ENST00000592928 OVOS2A0A0J9YW53 1432 aa13.62□□□□□ -0.23
RAD51D-223ENST00000592928 OVOS2Q6IE36 1432 aa13.62□□□□□ -0.23
RAD51D-223ENST00000592928 WNK3Q9BYP7 1800 aa13.62□□□□□ -0.23
RAD51D-223ENST00000592928 EVA1CP58658 441 aa13.61□□□□□ -0.23
RAD51D-223ENST00000592928 HDGFL2Q7Z4V5 671 aaPredicted RBP13.61□□□□□ -0.23
RAD51D-223ENST00000592928 THRAP3Q9Y2W1 955 aaKnown RBP13.61□□□□□ -0.23
RAD51D-223ENST00000592928 TNS1Q9HBL0 1735 aaKnown RBP13.61□□□□□ -0.23
RAD51D-223ENST00000592928 LARP1Q6PKG0 1096 aaKnown RBP13.6□□□□□ -0.23
RAD51D-223ENST00000592928 ARHGEF25Q86VW2 580 aa13.6□□□□□ -0.23
RAD51D-223ENST00000592928 TMC1Q8TDI8 760 aa13.6□□□□□ -0.23
RAD51D-223ENST00000592928 PCGF6Q9BYE7 350 aa13.6□□□□□ -0.23
RAD51D-223ENST00000592928 SLC12A5Q9H2X9 1139 aa13.6□□□□□ -0.23
RAD51D-223ENST00000592928 TERF2IPQ9NYB0 399 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms