RNA–Protein interactions for RNA: ENST00000592763.5

ILF3-222, Transcript of interleukin enhancer binding factor 3, human

TSL 5 BASIC

Gene ILF3, Length 3,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-222	ENST00000592763	DMRT2	Q9Y5R5	561 aa		13.93	□□□□□ -0.18
ILF3-222	ENST00000592763	EXOSC9	Q06265	439 aa	Known RBP	13.93	□□□□□ -0.18
ILF3-222	ENST00000592763	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.93	□□□□□ -0.18
ILF3-222	ENST00000592763	TTC21B	Q7Z4L5	1316 aa		13.93	□□□□□ -0.18
ILF3-222	ENST00000592763	ERICH6B	Q5W0A0	696 aa		13.93	□□□□□ -0.18
ILF3-222	ENST00000592763	ITPRIP	Q8IWB1	547 aa		13.93	□□□□□ -0.18
ILF3-222	ENST00000592763	PUS7	Q96PZ0	661 aa	Known RBP	13.93	□□□□□ -0.18
ILF3-222	ENST00000592763	DUSP27	Q5VZP5	1158 aa		13.92	□□□□□ -0.18
ILF3-222	ENST00000592763	ZC3H6	P61129	1189 aa	Known RBP	13.91	□□□□□ -0.18
ILF3-222	ENST00000592763	NECTIN2	Q92692	538 aa		13.91	□□□□□ -0.18
ILF3-222	ENST00000592763	USHBP1	Q8N6Y0	703 aa		13.9	□□□□□ -0.18
ILF3-222	ENST00000592763	PRR36	Q9H6K5	1346 aa		13.9	□□□□□ -0.18
ILF3-222	ENST00000592763	NINL	Q9Y2I6	1382 aa		13.9	□□□□□ -0.18
ILF3-222	ENST00000592763	MROH2A	A6NES4	1674 aa		13.9	□□□□□ -0.19
ILF3-222	ENST00000592763	AEBP1	Q8IUX7	1158 aa		13.9	□□□□□ -0.19
ILF3-222	ENST00000592763	ORAI2	Q96SN7	254 aa		13.9	□□□□□ -0.19
ILF3-222	ENST00000592763	NEXMIF	Q5QGS0	1516 aa		13.89	□□□□□ -0.19
ILF3-222	ENST00000592763	RBM19	Q9Y4C8	960 aa	Known RBP	13.89	□□□□□ -0.19
ILF3-222	ENST00000592763	ZFYVE9	O95405	1425 aa		13.89	□□□□□ -0.19
ILF3-222	ENST00000592763	FAM83G	A6ND36	823 aa		13.89	□□□□□ -0.19
ILF3-222	ENST00000592763	FCHSD2	O94868	740 aa		13.89	□□□□□ -0.19
ILF3-222	ENST00000592763	ZMYM4	Q5VZL5	1548 aa		13.89	□□□□□ -0.19
ILF3-222	ENST00000592763	PIK3C2B	O00750	1634 aa		13.88	□□□□□ -0.19
ILF3-222	ENST00000592763	AGL	P35573	1532 aa		13.88	□□□□□ -0.19
ILF3-222	ENST00000592763	CALD1	Q05682	793 aa	Known RBP	13.88	□□□□□ -0.19
ILF3-222	ENST00000592763	SKAP1	Q86WV1	359 aa		13.88	□□□□□ -0.19
ILF3-222	ENST00000592763	PHACTR3	Q96KR7	559 aa		13.88	□□□□□ -0.19
ILF3-222	ENST00000592763	MIS18A	Q9NYP9	233 aa		13.88	□□□□□ -0.19
ILF3-222	ENST00000592763	POLR3A	O14802	1390 aa	Predicted RBP	13.88	□□□□□ -0.19
ILF3-222	ENST00000592763	NSD2	O96028	1365 aa		13.88	□□□□□ -0.19
ILF3-222	ENST00000592763	ARHGEF40	Q8TER5	1519 aa		13.88	□□□□□ -0.19
ILF3-222	ENST00000592763	ALK	Q9UM73	1620 aa		13.87	□□□□□ -0.19
ILF3-222	ENST00000592763	NPC1L1	Q9UHC9	1359 aa		13.87	□□□□□ -0.19
ILF3-222	ENST00000592763	KDM5A	P29375	1690 aa	Known RBP	13.87	□□□□□ -0.19
ILF3-222	ENST00000592763	MCM10	Q7L590	875 aa		13.87	□□□□□ -0.19
ILF3-222	ENST00000592763	LMOD3	Q0VAK6	560 aa		13.87	□□□□□ -0.19
ILF3-222	ENST00000592763	NGEF	Q8N5V2	710 aa		13.87	□□□□□ -0.19
ILF3-222	ENST00000592763	ANP32A	P39687	249 aa	Known RBP	13.87	□□□□□ -0.19
ILF3-222	ENST00000592763	DDX17	Q92841	729 aa	Known RBP	13.87	□□□□□ -0.19
ILF3-222	ENST00000592763	PLEKHG1	Q9ULL1	1385 aa		13.86	□□□□□ -0.19
ILF3-222	ENST00000592763	NLRP2	Q9NX02	1062 aa		13.86	□□□□□ -0.19
ILF3-222	ENST00000592763	SLC4A10	Q6U841	1118 aa		13.85	□□□□□ -0.19
ILF3-222	ENST00000592763	ARX	Q96QS3	562 aa		13.85	□□□□□ -0.19
ILF3-222	ENST00000592763	APBB1	O00213	710 aa		13.85	□□□□□ -0.19
ILF3-222	ENST00000592763	USP35	Q9P2H5	1018 aa		13.85	□□□□□ -0.19
ILF3-222	ENST00000592763	ZKSCAN2	Q63HK3	967 aa		13.84	□□□□□ -0.19
ILF3-222	ENST00000592763	WDR63	Q8IWG1	891 aa		13.84	□□□□□ -0.19
ILF3-222	ENST00000592763	IPO8	O15397	1037 aa	Known RBP	13.84	□□□□□ -0.19
ILF3-222	ENST00000592763	PREX1	Q8TCU6	1659 aa		13.84	□□□□□ -0.19
ILF3-222	ENST00000592763	NRXN1	Q9ULB1	1477 aa		13.83	□□□□□ -0.19
ILF3-222	ENST00000592763	EIF4A2	Q14240	407 aa	Known RBP	13.83	□□□□□ -0.2
ILF3-222	ENST00000592763	NFE2L2	Q16236	605 aa		13.83	□□□□□ -0.2
ILF3-222	ENST00000592763	ADGRB1	O14514	1584 aa		13.83	□□□□□ -0.2
ILF3-222	ENST00000592763	CABLES1	Q8TDN4	633 aa		13.83	□□□□□ -0.2
ILF3-222	ENST00000592763	NLRP1	Q9C000	1473 aa		13.83	□□□□□ -0.2
ILF3-222	ENST00000592763	KRT28	Q7Z3Y7	464 aa		13.82	□□□□□ -0.2
ILF3-222	ENST00000592763	GNAI1	P63096	354 aa		13.82	□□□□□ -0.2
ILF3-222	ENST00000592763	TSPYL4	Q9UJ04	414 aa		13.82	□□□□□ -0.2
ILF3-222	ENST00000592763	MAP3K19	Q56UN5	1328 aa		13.82	□□□□□ -0.2
ILF3-222	ENST00000592763	SIGLEC1	Q9BZZ2	1709 aa		13.81	□□□□□ -0.2
ILF3-222	ENST00000592763	EIF2S2	P20042	333 aa	Known RBP	13.81	□□□□□ -0.2
ILF3-222	ENST00000592763	FANCI	Q9NVI1	1328 aa		13.81	□□□□□ -0.2
ILF3-222	ENST00000592763	TULP4	Q9NRJ4	1543 aa		13.81	□□□□□ -0.2
ILF3-222	ENST00000592763	DZIP1L	Q8IYY4	767 aa	Known RBP	13.81	□□□□□ -0.2
ILF3-222	ENST00000592763	MS4A1	P11836	297 aa		13.8	□□□□□ -0.2
ILF3-222	ENST00000592763	PTPRM	P28827	1452 aa		13.8	□□□□□ -0.2
ILF3-222	ENST00000592763	SIRT1	Q96EB6	747 aa		13.8	□□□□□ -0.2
ILF3-222	ENST00000592763	PLEKHG3	A1L390	1219 aa		13.8	□□□□□ -0.2
ILF3-222	ENST00000592763	RARS	P54136	660 aa	Known RBP	13.8	□□□□□ -0.2
ILF3-222	ENST00000592763	NOB1	Q9ULX3	412 aa	Known RBP	13.8	□□□□□ -0.2
ILF3-222	ENST00000592763	TNN	Q9UQP3	1299 aa		13.8	□□□□□ -0.2
ILF3-222	ENST00000592763	TMEM131L	A2VDJ0	1609 aa		13.79	□□□□□ -0.2
ILF3-222	ENST00000592763	TEF	Q10587	303 aa		13.79	□□□□□ -0.2
ILF3-222	ENST00000592763	TWISTNB	Q3B726	338 aa	Predicted RBP	13.79	□□□□□ -0.2
ILF3-222	ENST00000592763	EDC4	Q6P2E9	1401 aa	Known RBP	13.79	□□□□□ -0.2
ILF3-222	ENST00000592763	CHRNA2	Q15822	529 aa		13.79	□□□□□ -0.2
ILF3-222	ENST00000592763	SSH1	Q8WYL5	1049 aa		13.79	□□□□□ -0.2
ILF3-222	ENST00000592763	C19orf44	Q9H6X5	657 aa		13.79	□□□□□ -0.2
ILF3-222	ENST00000592763	C1orf141	Q5JVX7	400 aa		13.78	□□□□□ -0.2
ILF3-222	ENST00000592763	STK31	Q9BXU1	1019 aa		13.78	□□□□□ -0.2
ILF3-222	ENST00000592763	SETBP1	Q9Y6X0	1596 aa		13.78	□□□□□ -0.2
ILF3-222	ENST00000592763	IL13	P35225	146 aa		13.77	□□□□□ -0.2
ILF3-222	ENST00000592763	LRRC59	Q96AG4	307 aa	Known RBP	13.77	□□□□□ -0.2
ILF3-222	ENST00000592763	ZNF428	Q96B54	188 aa		13.77	□□□□□ -0.2
ILF3-222	ENST00000592763	RSPH6A	Q9H0K4	717 aa		13.77	□□□□□ -0.2
ILF3-222	ENST00000592763	ZC3H13	Q5T200	1668 aa	Known RBP	13.77	□□□□□ -0.2
ILF3-222	ENST00000592763	QRICH2	Q9H0J4	1663 aa		13.77	□□□□□ -0.2
ILF3-222	ENST00000592763	STRN4	Q9NRL3	753 aa		13.77	□□□□□ -0.21
ILF3-222	ENST00000592763	ADAMTS13	Q76LX8	1427 aa		13.77	□□□□□ -0.21
ILF3-222	ENST00000592763	IQGAP1	P46940	1657 aa		13.77	□□□□□ -0.21
ILF3-222	ENST00000592763	EVA1C	P58658	441 aa		13.77	□□□□□ -0.21
ILF3-222	ENST00000592763	LAMC1	P11047	1609 aa		13.76	□□□□□ -0.21
ILF3-222	ENST00000592763	NKTR	P30414	1462 aa	Known RBP	13.76	□□□□□ -0.21
ILF3-222	ENST00000592763	SPATA31D1	Q6ZQQ2	1576 aa		13.76	□□□□□ -0.21
ILF3-222	ENST00000592763	RAPGEF4	Q8WZA2	1011 aa		13.76	□□□□□ -0.21
ILF3-222	ENST00000592763	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.76	□□□□□ -0.21
ILF3-222	ENST00000592763	BLM	P54132	1417 aa	Predicted RBP	13.76	□□□□□ -0.21
ILF3-222	ENST00000592763	KRT24	Q2M2I5	525 aa		13.76	□□□□□ -0.21
ILF3-222	ENST00000592763	EYA1	Q99502	592 aa		13.76	□□□□□ -0.21
ILF3-222	ENST00000592763	TTC21A	Q8NDW8	1320 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 560 ms