RNA–Protein interactions for RNA: ENST00000592642.1

TRIM65-206, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-206ENST00000592642 ZRANB1Q9UGI0 708 aa13.74□□□□□ -0.21
TRIM65-206ENST00000592642 AEBP2Q6ZN18 517 aaPredicted RBP13.73□□□□□ -0.21
TRIM65-206ENST00000592642 OVOS2A0A0J9YW53 1432 aa13.73□□□□□ -0.21
TRIM65-206ENST00000592642 OVOS2Q6IE36 1432 aa13.73□□□□□ -0.21
TRIM65-206ENST00000592642 USP31Q70CQ4 1352 aa13.72□□□□□ -0.21
TRIM65-206ENST00000592642 SCAF1Q9H7N4 1312 aaKnown RBP13.72□□□□□ -0.21
TRIM65-206ENST00000592642 NRKQ7Z2Y5 1582 aa13.72□□□□□ -0.21
TRIM65-206ENST00000592642 PNISRQ8TF01 805 aaKnown RBP13.72□□□□□ -0.21
TRIM65-206ENST00000592642 MON2Q7Z3U7 1717 aa13.71□□□□□ -0.21
TRIM65-206ENST00000592642 COG3Q96JB2 828 aa13.7□□□□□ -0.22
TRIM65-206ENST00000592642 ITSN1Q15811 1721 aa13.7□□□□□ -0.22
TRIM65-206ENST00000592642 AATKQ6ZMQ8 1374 aa13.7□□□□□ -0.22
TRIM65-206ENST00000592642 AKAP12Q02952 1782 aa13.69□□□□□ -0.22
TRIM65-206ENST00000592642 FOXO3O43524 673 aa13.69□□□□□ -0.22
TRIM65-206ENST00000592642 TNNT2P45379 298 aaPredicted RBP13.69□□□□□ -0.22
TRIM65-206ENST00000592642 BRINP3Q76B58 766 aa13.69□□□□□ -0.22
TRIM65-206ENST00000592642 SLAIN2Q9P270 581 aa13.68□□□□□ -0.22
TRIM65-206ENST00000592642 MTHFSP49914 203 aa13.67□□□□□ -0.22
TRIM65-206ENST00000592642 PSME1Q06323 249 aa13.67□□□□□ -0.22
TRIM65-206ENST00000592642 XIRP1Q702N8 1843 aaKnown RBP13.67□□□□□ -0.22
TRIM65-206ENST00000592642 SMG6Q86US8 1419 aaKnown RBP13.66□□□□□ -0.22
TRIM65-206ENST00000592642 KRT28Q7Z3Y7 464 aa13.66□□□□□ -0.22
TRIM65-206ENST00000592642 YTHDC1Q96MU7 727 aaKnown RBP13.66□□□□□ -0.22
TRIM65-206ENST00000592642 POLKQ9UBT6 870 aa13.66□□□□□ -0.22
TRIM65-206ENST00000592642 INSRP06213 1382 aa13.66□□□□□ -0.22
TRIM65-206ENST00000592642 PNPLA6Q8IY17 1366 aa13.66□□□□□ -0.22
TRIM65-206ENST00000592642 NPHP3Q7Z494 1330 aa13.65□□□□□ -0.22
TRIM65-206ENST00000592642 FBLN1P23142 703 aa13.65□□□□□ -0.22
TRIM65-206ENST00000592642 XPCQ01831 940 aaPredicted RBP13.65□□□□□ -0.22
TRIM65-206ENST00000592642 FAM9BQ8IZU0 186 aa13.65□□□□□ -0.22
TRIM65-206ENST00000592642 DDX17Q92841 729 aaKnown RBP13.65□□□□□ -0.22
TRIM65-206ENST00000592642 SBNO1A3KN83 1393 aa13.65□□□□□ -0.22
TRIM65-206ENST00000592642 KIF1AQ12756 1690 aa13.65□□□□□ -0.22
TRIM65-206ENST00000592642 COL3A1P02461 1466 aaPredicted RBP13.64□□□□□ -0.23
TRIM65-206ENST00000592642 NLRP6P59044 892 aa13.64□□□□□ -0.23
TRIM65-206ENST00000592642 ABTB2Q8N961 1025 aa13.64□□□□□ -0.23
TRIM65-206ENST00000592642 PXDNQ92626 1479 aa13.63□□□□□ -0.23
TRIM65-206ENST00000592642 PAK3O75914 559 aaPredicted RBP13.63□□□□□ -0.23
TRIM65-206ENST00000592642 EMILIN1Q9Y6C2 1016 aa13.63□□□□□ -0.23
TRIM65-206ENST00000592642 USP19O94966 1318 aa13.63□□□□□ -0.23
TRIM65-206ENST00000592642 SOS2Q07890 1332 aaPredicted RBP13.63□□□□□ -0.23
TRIM65-206ENST00000592642 PIK3C2AO00443 1686 aa13.63□□□□□ -0.23
TRIM65-206ENST00000592642 NUTM2GQ5VZR2 741 aa13.62□□□□□ -0.23
TRIM65-206ENST00000592642 RGPD8O14715 1765 aaPredicted RBP13.62□□□□□ -0.23
TRIM65-206ENST00000592642 RRS1Q15050 365 aaKnown RBP13.61□□□□□ -0.23
TRIM65-206ENST00000592642 CFAP53Q96M91 514 aa13.61□□□□□ -0.23
TRIM65-206ENST00000592642 KIF20BQ96Q89 1820 aa13.61□□□□□ -0.23
TRIM65-206ENST00000592642 TNS3Q68CZ2 1445 aa13.61□□□□□ -0.23
TRIM65-206ENST00000592642 ANKRD26Q9UPS8 1709 aa13.61□□□□□ -0.23
TRIM65-206ENST00000592642 ADAMTS8Q9UP79 889 aa13.6□□□□□ -0.23
TRIM65-206ENST00000592642 CDK12Q9NYV4 1490 aaPredicted RBP13.6□□□□□ -0.23
TRIM65-206ENST00000592642 MAP3K19Q56UN5 1328 aa13.6□□□□□ -0.23
TRIM65-206ENST00000592642 SPATA31A3Q5VYP0 1347 aa13.6□□□□□ -0.23
TRIM65-206ENST00000592642 BLMP54132 1417 aaPredicted RBP13.59□□□□□ -0.23
TRIM65-206ENST00000592642 USP54Q70EL1 1684 aa13.59□□□□□ -0.23
TRIM65-206ENST00000592642 SLIT3O75094 1523 aa13.59□□□□□ -0.23
TRIM65-206ENST00000592642 TRPM3Q9HCF6 1732 aaPredicted RBP13.59□□□□□ -0.23
TRIM65-206ENST00000592642 WDR43Q15061 677 aaKnown RBP eCLIP13.58□□□□□ -0.24
TRIM65-206ENST00000592642 IQSEC2Q5JU85 1478 aa13.57□□□□□ -0.24
TRIM65-206ENST00000592642 NFAT5O94916 1531 aa13.57□□□□□ -0.24
TRIM65-206ENST00000592642 ARHGEF10O15013 1369 aa13.57□□□□□ -0.24
TRIM65-206ENST00000592642 KIF24Q5T7B8 1368 aa13.57□□□□□ -0.24
TRIM65-206ENST00000592642 SOX12O15370 315 aa13.56□□□□□ -0.24
TRIM65-206ENST00000592642 DIAPH1O60610 1272 aaKnown RBP13.56□□□□□ -0.24
TRIM65-206ENST00000592642 IL13P35225 146 aa13.56□□□□□ -0.24
TRIM65-206ENST00000592642 HNRNPUQ00839 825 aaKnown RBP eCLIP13.56□□□□□ -0.24
TRIM65-206ENST00000592642 KCNH5Q8NCM2 988 aa13.56□□□□□ -0.24
TRIM65-206ENST00000592642 PPM1GO15355 546 aaPredicted RBP13.55□□□□□ -0.24
TRIM65-206ENST00000592642 GCP02774 474 aa13.55□□□□□ -0.24
TRIM65-206ENST00000592642 LMOD2Q6P5Q4 547 aa13.55□□□□□ -0.24
TRIM65-206ENST00000592642 RTL1A6NKG5 1358 aa13.55□□□□□ -0.24
TRIM65-206ENST00000592642 FLT4P35916 1363 aa13.55□□□□□ -0.24
TRIM65-206ENST00000592642 ARHGEF25Q86VW2 580 aa13.54□□□□□ -0.24
TRIM65-206ENST00000592642 NUDCQ9Y266 331 aa13.54□□□□□ -0.24
TRIM65-206ENST00000592642 MED1Q15648 1581 aaPredicted RBP13.54□□□□□ -0.24
TRIM65-206ENST00000592642 MARF1Q9Y4F3 1742 aaKnown RBP13.53□□□□□ -0.24
TRIM65-206ENST00000592642 TOM1O60784 492 aa13.53□□□□□ -0.24
TRIM65-206ENST00000592642 EIF4A2Q14240 407 aaKnown RBP13.53□□□□□ -0.24
TRIM65-206ENST00000592642 HSP90AB2PQ58FF8 381 aa13.53□□□□□ -0.24
TRIM65-206ENST00000592642 ZBED9Q6R2W3 1325 aa13.53□□□□□ -0.24
TRIM65-206ENST00000592642 AHDC1Q5TGY3 1603 aaPredicted RBP13.53□□□□□ -0.24
TRIM65-206ENST00000592642 ALS2Q96Q42 1657 aa13.53□□□□□ -0.24
TRIM65-206ENST00000592642 HOXC9P31274 260 aa13.52□□□□□ -0.25
TRIM65-206ENST00000592642 CERKQ8TCT0 537 aa13.52□□□□□ -0.25
TRIM65-206ENST00000592642 SHPRHQ149N8 1683 aa13.52□□□□□ -0.25
TRIM65-206ENST00000592642 NHSL1Q5SYE7 1610 aa13.51□□□□□ -0.25
TRIM65-206ENST00000592642 U2AF1L5P0DN76 240 aaPredicted RBP13.51□□□□□ -0.25
TRIM65-206ENST00000592642 AMPHP49418 695 aa13.51□□□□□ -0.25
TRIM65-206ENST00000592642 U2AF1Q01081 240 aaKnown RBP eCLIP13.51□□□□□ -0.25
TRIM65-206ENST00000592642 IP6K1Q92551 441 aa13.51□□□□□ -0.25
TRIM65-206ENST00000592642 PEAK1Q9H792 1746 aa13.5□□□□□ -0.25
TRIM65-206ENST00000592642 UBAP1LF5GYI3 381 aa13.5□□□□□ -0.25
TRIM65-206ENST00000592642 U2SURPO15042 1029 aaKnown RBP13.5□□□□□ -0.25
TRIM65-206ENST00000592642 CCDC146Q8IYE0 955 aa13.5□□□□□ -0.25
TRIM65-206ENST00000592642 CPDO75976 1380 aa13.49□□□□□ -0.25
TRIM65-206ENST00000592642 CENPBP07199 599 aaPredicted RBP13.49□□□□□ -0.25
TRIM65-206ENST00000592642 CABLES1Q8TDN4 633 aa13.49□□□□□ -0.25
TRIM65-206ENST00000592642 PLEKHF1Q96S99 279 aa13.49□□□□□ -0.25
TRIM65-206ENST00000592642 RSPH6AQ9H0K4 717 aa13.49□□□□□ -0.25
TRIM65-206ENST00000592642 ROBO1Q9Y6N7 1651 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms