RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 PTPRNQ16849 979 aa11.29□□□□□ -0.6
VMP1-215ENST00000592619 WNT2BQ93097 391 aa11.29□□□□□ -0.6
VMP1-215ENST00000592619 JUNDP17535 347 aa11.28□□□□□ -0.6
VMP1-215ENST00000592619 NR1H3Q13133 447 aa11.28□□□□□ -0.6
VMP1-215ENST00000592619 UCN2Q96RP3 112 aa11.28□□□□□ -0.6
VMP1-215ENST00000592619 FKBPLQ9UIM3 349 aa11.28□□□□□ -0.6
VMP1-215ENST00000592619 ZC3H4Q9UPT8 1303 aaKnown RBP11.28□□□□□ -0.6
VMP1-215ENST00000592619 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.26□□□□□ -0.61
VMP1-215ENST00000592619 RFX1P22670 979 aa11.26□□□□□ -0.61
VMP1-215ENST00000592619 MSS51Q4VC12 460 aa11.26□□□□□ -0.61
VMP1-215ENST00000592619 TFIP11Q9UBB9 837 aaKnown RBP11.26□□□□□ -0.61
VMP1-215ENST00000592619 ZBBXA8MT70 800 aa11.25□□□□□ -0.61
VMP1-215ENST00000592619 FBXO45P0C2W1 286 aa11.24□□□□□ -0.61
VMP1-215ENST00000592619 USTQ9Y2C2 406 aa11.24□□□□□ -0.61
VMP1-215ENST00000592619 LMOD1P29536 600 aaPredicted RBP11.23□□□□□ -0.61
VMP1-215ENST00000592619 WBP1LQ9NX94 342 aa11.23□□□□□ -0.61
VMP1-215ENST00000592619 DXOO77932 396 aaKnown RBP11.22□□□□□ -0.61
VMP1-215ENST00000592619 EVA1BQ9NVM1 165 aa11.22□□□□□ -0.61
VMP1-215ENST00000592619 MAFBQ9Y5Q3 323 aaPredicted RBP11.22□□□□□ -0.61
VMP1-215ENST00000592619 MMP16P51512 607 aa11.21□□□□□ -0.61
VMP1-215ENST00000592619 FAM160A2Q8N612 972 aaPredicted RBP11.21□□□□□ -0.61
VMP1-215ENST00000592619 SPSB2Q99619 263 aa11.21□□□□□ -0.61
VMP1-215ENST00000592619 MAP10Q9P2G4 905 aa11.21□□□□□ -0.61
VMP1-215ENST00000592619 GPSM3Q9Y4H4 160 aa11.21□□□□□ -0.61
VMP1-215ENST00000592619 CCNYL3P0C7X3 344 aa11.2□□□□□ -0.62
VMP1-215ENST00000592619 CSB-PGBD3P0DP91 1061 aa11.2□□□□□ -0.62
VMP1-215ENST00000592619 TBC1D9Q6ZT07 1266 aa11.2□□□□□ -0.62
VMP1-215ENST00000592619 AEBP1Q8IUX7 1158 aa11.2□□□□□ -0.62
VMP1-215ENST00000592619 NFATC2IPQ8NCF5 419 aa11.2□□□□□ -0.62
VMP1-215ENST00000592619 ARMC2Q8NEN0 867 aa11.2□□□□□ -0.62
VMP1-215ENST00000592619 GPKOWQ92917 476 aaPredicted RBP eCLIP11.2□□□□□ -0.627e-23■■□□□ 12.4
VMP1-215ENST00000592619 ATP9BO43861 1147 aa11.19□□□□□ -0.62
VMP1-215ENST00000592619 NYAP1Q6ZVC0 841 aa11.19□□□□□ -0.62
VMP1-215ENST00000592619 CCDC9Q9Y3X0 531 aaKnown RBP11.19□□□□□ -0.62
VMP1-215ENST00000592619 ATG7O95352 703 aa11.18□□□□□ -0.62
VMP1-215ENST00000592619 CTHP32929 405 aa11.18□□□□□ -0.62
VMP1-215ENST00000592619 PDXDC2PQ6P474 469 aa11.18□□□□□ -0.62
VMP1-215ENST00000592619 THSD4Q6ZMP0 1018 aa11.18□□□□□ -0.62
VMP1-215ENST00000592619 KCNH2Q12809 1159 aa11.17□□□□□ -0.62
VMP1-215ENST00000592619 ZNF592Q92610 1267 aa11.17□□□□□ -0.62
VMP1-215ENST00000592619 NUDT12Q9BQG2 462 aa11.17□□□□□ -0.62
VMP1-215ENST00000592619 PATL2C9JE40 543 aaKnown RBP11.16□□□□□ -0.62
VMP1-215ENST00000592619 MCCD1P59942 119 aaPredicted RBP11.16□□□□□ -0.62
VMP1-215ENST00000592619 PTK2Q05397 1052 aa11.15□□□□□ -0.62
VMP1-215ENST00000592619 BRD1O95696 1058 aa11.14□□□□□ -0.63
VMP1-215ENST00000592619 COPS2P61201 443 aa11.14□□□□□ -0.63
VMP1-215ENST00000592619 NBPF14Q5TI25 921 aa11.13□□□□□ -0.63
VMP1-215ENST00000592619 VRTNQ9H8Y1 702 aa11.13□□□□□ -0.63
VMP1-215ENST00000592619 ZPR1O75312 459 aa11.12□□□□□ -0.63
VMP1-215ENST00000592619 ADH1BP00325 375 aa11.12□□□□□ -0.63
VMP1-215ENST00000592619 KANK4Q5T7N3 995 aaPredicted RBP11.12□□□□□ -0.63
VMP1-215ENST00000592619 PLEKHM2Q8IWE5 1019 aa11.12□□□□□ -0.63
VMP1-215ENST00000592619 PIK3CDO00329 1044 aa11.11□□□□□ -0.63
VMP1-215ENST00000592619 KCNA1Q09470 495 aa11.11□□□□□ -0.63
VMP1-215ENST00000592619 OCSTAMPQ9BR26 566 aa11.11□□□□□ -0.63
VMP1-215ENST00000592619 PRDM9Q9NQV7 894 aa11.11□□□□□ -0.63
VMP1-215ENST00000592619 ELOAQ14241 798 aaKnown RBP11.1□□□□□ -0.63
VMP1-215ENST00000592619 CDCA8Q53HL2 280 aa11.1□□□□□ -0.63
VMP1-215ENST00000592619 KCTD12Q96CX2 325 aaKnown RBP11.1□□□□□ -0.63
VMP1-215ENST00000592619 CEP126Q9P2H0 1117 aa11.1□□□□□ -0.63
VMP1-215ENST00000592619 TMEM88BA6NKF7 163 aa11.09□□□□□ -0.63
VMP1-215ENST00000592619 USP17L3A6NCW0 530 aa11.08□□□□□ -0.64
VMP1-215ENST00000592619 USP17L4A6NCW7 530 aa11.08□□□□□ -0.64
VMP1-215ENST00000592619 SKIP12755 728 aa11.08□□□□□ -0.64
VMP1-215ENST00000592619 USP17L2Q6R6M4 530 aa11.08□□□□□ -0.64
VMP1-215ENST00000592619 USP17L1Q7RTZ2 530 aa11.08□□□□□ -0.64
VMP1-215ENST00000592619 IRX2Q9BZI1 471 aaPredicted RBP11.08□□□□□ -0.64
VMP1-215ENST00000592619 USP17L5A8MUK1 530 aa11.07□□□□□ -0.64
VMP1-215ENST00000592619 LZTS3O60299 673 aaPredicted RBP11.07□□□□□ -0.64
VMP1-215ENST00000592619 PHTF2Q8N3S3 785 aa11.07□□□□□ -0.64
VMP1-215ENST00000592619 FAM174AQ8TBP5 190 aa11.07□□□□□ -0.64
VMP1-215ENST00000592619 MTRQ99707 1265 aa11.07□□□□□ -0.64
VMP1-215ENST00000592619 TLL1O43897 1013 aa11.06□□□□□ -0.64
VMP1-215ENST00000592619 SLFNL1Q499Z3 407 aa11.06□□□□□ -0.64
VMP1-215ENST00000592619 SH3BP5LQ7L8J4 393 aa11.06□□□□□ -0.64
VMP1-215ENST00000592619 GZF1Q9H116 711 aaPredicted RBP11.06□□□□□ -0.64
VMP1-215ENST00000592619 UNC93B1Q9H1C4 597 aa11.06□□□□□ -0.64
VMP1-215ENST00000592619 CHIC2Q9UKJ5 165 aa11.06□□□□□ -0.64
VMP1-215ENST00000592619 RGS20O76081 388 aa11.05□□□□□ -0.64
VMP1-215ENST00000592619 TJAP1Q5JTD0 557 aa11.05□□□□□ -0.64
VMP1-215ENST00000592619 ADAM32Q8TC27 787 aa11.05□□□□□ -0.64
VMP1-215ENST00000592619 ARHGAP9Q9BRR9 750 aa11.05□□□□□ -0.64
VMP1-215ENST00000592619 IL21Q9HBE4 155 aa11.05□□□□□ -0.64
VMP1-215ENST00000592619 PTCRAQ6ISU1 281 aaPredicted RBP11.04□□□□□ -0.64
VMP1-215ENST00000592619 SLC6A16Q9GZN6 736 aa11.04□□□□□ -0.64
VMP1-215ENST00000592619 PCDHB9Q9Y5E1 797 aa11.04□□□□□ -0.64
VMP1-215ENST00000592619 CARNS1A5YM72 827 aa11.03□□□□□ -0.64
VMP1-215ENST00000592619 FAM196BA6NMK8 535 aa11.02□□□□□ -0.65
VMP1-215ENST00000592619 MAP7D1Q3KQU3 841 aa11.02□□□□□ -0.65
VMP1-215ENST00000592619 SH3RF1Q7Z6J0 888 aa11.02□□□□□ -0.65
VMP1-215ENST00000592619 ZBTB33Q86T24 672 aa11.02□□□□□ -0.65
VMP1-215ENST00000592619 RNF135Q8IUD6 432 aa11.02□□□□□ -0.65
VMP1-215ENST00000592619 TMCO4Q5TGY1 634 aa11.01□□□□□ -0.65
VMP1-215ENST00000592619 CCDC24Q8N4L8 307 aa11.01□□□□□ -0.65
VMP1-215ENST00000592619 PLPP7Q8NBV4 271 aa11.01□□□□□ -0.65
VMP1-215ENST00000592619 MKRN1Q9UHC7 482 aaKnown RBP11.01□□□□□ -0.65
VMP1-215ENST00000592619 ZMIZ1Q9ULJ6 1067 aa11.01□□□□□ -0.65
VMP1-215ENST00000592619 ATP5J2-PTCD1G3V325 749 aa11□□□□□ -0.65
VMP1-215ENST00000592619 DEPDC4Q8N2C3 294 aa11□□□□□ -0.65
VMP1-215ENST00000592619 ZNF516Q92618 1163 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms