RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	RRP7A	Q9Y3A4	280 aa	Known RBP	18.26	■□□□□ 0.51
RFX2-222	ENST00000592546	MTHFS	P49914	203 aa		18.25	■□□□□ 0.51
RFX2-222	ENST00000592546	C22orf23	Q9BZE7	217 aa		18.25	■□□□□ 0.51
RFX2-222	ENST00000592546	CABP2	Q9NPB3	220 aa		18.25	■□□□□ 0.51
RFX2-222	ENST00000592546	ERBB4	Q15303	1308 aa		18.24	■□□□□ 0.51
RFX2-222	ENST00000592546	RERE	Q9P2R6	1566 aa		18.24	■□□□□ 0.51
RFX2-222	ENST00000592546	DDX11L8	A8MPP1	907 aa		18.24	■□□□□ 0.51
RFX2-222	ENST00000592546	RWDD1	Q9H446	243 aa	Predicted RBP	18.24	■□□□□ 0.51
RFX2-222	ENST00000592546	TNN	Q9UQP3	1299 aa		18.24	■□□□□ 0.51
RFX2-222	ENST00000592546	ARHGAP31	Q2M1Z3	1444 aa		18.24	■□□□□ 0.51
RFX2-222	ENST00000592546	ZNF692	Q9BU19	519 aa	Predicted RBP	18.24	■□□□□ 0.51
RFX2-222	ENST00000592546	STK26	Q9P289	416 aa		18.23	■□□□□ 0.51
RFX2-222	ENST00000592546	EVC2	Q86UK5	1308 aa		18.22	■□□□□ 0.51
RFX2-222	ENST00000592546	ARHGEF40	Q8TER5	1519 aa		18.22	■□□□□ 0.51
RFX2-222	ENST00000592546	AGL	P35573	1532 aa		18.22	■□□□□ 0.51
RFX2-222	ENST00000592546	TCP11L2	Q8N4U5	519 aa		18.22	■□□□□ 0.51
RFX2-222	ENST00000592546	NEXMIF	Q5QGS0	1516 aa		18.21	■□□□□ 0.51
RFX2-222	ENST00000592546	MLEC	Q14165	292 aa		18.21	■□□□□ 0.51
RFX2-222	ENST00000592546	RUNDC1	Q96C34	613 aa		18.2	■□□□□ 0.5
RFX2-222	ENST00000592546	NCOA3	Q9Y6Q9	1424 aa		18.2	■□□□□ 0.5
RFX2-222	ENST00000592546	PIK3C2B	O00750	1634 aa		18.2	■□□□□ 0.5
RFX2-222	ENST00000592546	TULP4	Q9NRJ4	1543 aa		18.19	■□□□□ 0.5
RFX2-222	ENST00000592546	DDIT3	P35638	169 aa		18.19	■□□□□ 0.5
RFX2-222	ENST00000592546	MFAP1	P55081	439 aa	Known RBP	18.19	■□□□□ 0.5
RFX2-222	ENST00000592546	SHPRH	Q149N8	1683 aa		18.19	■□□□□ 0.5
RFX2-222	ENST00000592546	PHF23	Q9BUL5	403 aa	Predicted RBP	18.18	■□□□□ 0.5
RFX2-222	ENST00000592546	HSCB	Q8IWL3	235 aa		18.17	■□□□□ 0.5
RFX2-222	ENST00000592546	ANKRD36B	Q8N2N9	1353 aa		18.17	■□□□□ 0.5
RFX2-222	ENST00000592546	FBXO31	Q5XUX0	539 aa	Predicted RBP	18.17	■□□□□ 0.5
RFX2-222	ENST00000592546	BCL2L13	Q9BXK5	485 aa		18.17	■□□□□ 0.5
RFX2-222	ENST00000592546	SLC52A1	Q9NWF4	448 aa		18.17	■□□□□ 0.5
RFX2-222	ENST00000592546	PREX1	Q8TCU6	1659 aa		18.17	■□□□□ 0.5
RFX2-222	ENST00000592546	IQSEC2	Q5JU85	1478 aa		18.16	■□□□□ 0.5
RFX2-222	ENST00000592546	TRIM44	Q96DX7	344 aa	Predicted RBP	18.16	■□□□□ 0.5
RFX2-222	ENST00000592546	PUS7	Q96PZ0	661 aa	Known RBP	18.16	■□□□□ 0.5
RFX2-222	ENST00000592546	ARHGEF28	Q8N1W1	1705 aa	Known RBP	18.16	■□□□□ 0.5
RFX2-222	ENST00000592546	TPM2	P07951	284 aa		18.15	■□□□□ 0.5
RFX2-222	ENST00000592546	MVP	Q14764	893 aa	Known RBP	18.15	■□□□□ 0.5
RFX2-222	ENST00000592546	GAS2L3	Q86XJ1	694 aa		18.15	■□□□□ 0.5
RFX2-222	ENST00000592546	WDR63	Q8IWG1	891 aa		18.15	■□□□□ 0.5
RFX2-222	ENST00000592546	PPP6R1	Q9UPN7	881 aa		18.15	■□□□□ 0.5
RFX2-222	ENST00000592546	CLTC	Q00610	1675 aa	Known RBP	18.15	■□□□□ 0.5
RFX2-222	ENST00000592546	SRPK2	P78362	688 aa	Known RBP	18.15	■□□□□ 0.5
RFX2-222	ENST00000592546	CFAP53	Q96M91	514 aa		18.15	■□□□□ 0.5
RFX2-222	ENST00000592546	TRH	P20396	242 aa	Predicted RBP	18.14	■□□□□ 0.49
RFX2-222	ENST00000592546	U2AF1L5	P0DN76	240 aa	Predicted RBP	18.13	■□□□□ 0.49
RFX2-222	ENST00000592546	U2AF1	Q01081	240 aa	Known RBP eCLIP	18.13	■□□□□ 0.49
RFX2-222	ENST00000592546	MINK1	Q8N4C8	1332 aa	Predicted RBP	18.13	■□□□□ 0.49
RFX2-222	ENST00000592546	GGNBP2	Q9H3C7	697 aa		18.13	■□□□□ 0.49
RFX2-222	ENST00000592546	TNPO1	Q92973	898 aa	Known RBP	18.12	■□□□□ 0.49
RFX2-222	ENST00000592546		A0A1W2PP64	1363 aa		18.12	■□□□□ 0.49
RFX2-222	ENST00000592546	SNX21	Q969T3	373 aa		18.12	■□□□□ 0.49
RFX2-222	ENST00000592546	PRAM1	Q96QH2	718 aa		18.12	■□□□□ 0.49
RFX2-222	ENST00000592546	ESF1	Q9H501	851 aa	Known RBP	18.11	■□□□□ 0.49
RFX2-222	ENST00000592546	CIZ1	Q9ULV3	898 aa	Predicted RBP	18.11	■□□□□ 0.49
RFX2-222	ENST00000592546	USP32	Q8NFA0	1604 aa		18.11	■□□□□ 0.49
RFX2-222	ENST00000592546	SMC5	Q8IY18	1101 aa		18.11	■□□□□ 0.49
RFX2-222	ENST00000592546	ZFYVE9	O95405	1425 aa		18.11	■□□□□ 0.49
RFX2-222	ENST00000592546	MYO5B	Q9ULV0	1848 aa		18.11	■□□□□ 0.49
RFX2-222	ENST00000592546	RBM25	P49756	843 aa	Known RBP	18.1	■□□□□ 0.49
RFX2-222	ENST00000592546	HDAC1	Q13547	482 aa	Predicted RBP	18.1	■□□□□ 0.49
RFX2-222	ENST00000592546	CCDC27	Q2M243	656 aa		18.1	■□□□□ 0.49
RFX2-222	ENST00000592546	SKOR2	Q2VWA4	1001 aa	Predicted RBP	18.09	■□□□□ 0.49
RFX2-222	ENST00000592546	GBP4	Q96PP9	640 aa		18.09	■□□□□ 0.49
RFX2-222	ENST00000592546	ZKSCAN2	Q63HK3	967 aa		18.09	■□□□□ 0.49
RFX2-222	ENST00000592546	PDCL3	Q9H2J4	239 aa		18.09	■□□□□ 0.49
RFX2-222	ENST00000592546	RAB3GAP1	Q15042	981 aa		18.08	■□□□□ 0.49
RFX2-222	ENST00000592546	DZIP1L	Q8IYY4	767 aa	Known RBP	18.08	■□□□□ 0.49
RFX2-222	ENST00000592546	NSD2	O96028	1365 aa		18.08	■□□□□ 0.48
RFX2-222	ENST00000592546	TMEM131L	A2VDJ0	1609 aa		18.07	■□□□□ 0.48
RFX2-222	ENST00000592546	FYB1	O15117	783 aa		18.07	■□□□□ 0.48
RFX2-222	ENST00000592546	FTSJ3	Q8IY81	847 aa	Known RBP	18.07	■□□□□ 0.48
RFX2-222	ENST00000592546	STAG3	Q9UJ98	1225 aa		18.07	■□□□□ 0.48
RFX2-222	ENST00000592546	ABCC11	Q96J66	1382 aa		18.07	■□□□□ 0.48
RFX2-222	ENST00000592546	PTPRM	P28827	1452 aa		18.07	■□□□□ 0.48
RFX2-222	ENST00000592546	U2SURP	O15042	1029 aa	Known RBP	18.06	■□□□□ 0.48
RFX2-222	ENST00000592546	PTMS	P20962	102 aa		18.06	■□□□□ 0.48
RFX2-222	ENST00000592546	YTHDC2	Q9H6S0	1430 aa	Known RBP	18.05	■□□□□ 0.48
RFX2-222	ENST00000592546	CCDC173	Q0VFZ6	552 aa		18.05	■□□□□ 0.48
RFX2-222	ENST00000592546	KIAA1211	Q6ZU35	1233 aa		18.05	■□□□□ 0.48
RFX2-222	ENST00000592546	PPP1R9B	Q96SB3	815 aa		18.05	■□□□□ 0.48
RFX2-222	ENST00000592546	NCBP3	Q53F19	620 aa	Known RBP	18.04	■□□□□ 0.48
RFX2-222	ENST00000592546	SPATA31D1	Q6ZQQ2	1576 aa		18.03	■□□□□ 0.48
RFX2-222	ENST00000592546	HSP90AB1	P08238	724 aa	Known RBP	18.03	■□□□□ 0.48
RFX2-222	ENST00000592546	TSR2	Q969E8	191 aa	Known RBP	18.03	■□□□□ 0.48
RFX2-222	ENST00000592546	PLEKHF1	Q96S99	279 aa		18.03	■□□□□ 0.48
RFX2-222	ENST00000592546	CDK19	Q9BWU1	502 aa		18.03	■□□□□ 0.48
RFX2-222	ENST00000592546	TERF2IP	Q9NYB0	399 aa		18.03	■□□□□ 0.48
RFX2-222	ENST00000592546	CD163L1	Q9NR16	1453 aa		18.02	■□□□□ 0.48
RFX2-222	ENST00000592546	ZSCAN30	Q86W11	494 aa		18.02	■□□□□ 0.48
RFX2-222	ENST00000592546	CABP1	Q9NZU7	370 aa		18.02	■□□□□ 0.48
RFX2-222	ENST00000592546	CT47B1	P0C2W7	299 aa	Predicted RBP	18.02	■□□□□ 0.47
RFX2-222	ENST00000592546	TRIM27	P14373	513 aa		18.02	■□□□□ 0.47
RFX2-222	ENST00000592546	DDX19B	Q9UMR2	479 aa		18.02	■□□□□ 0.47
RFX2-222	ENST00000592546	ATAD2	Q6PL18	1390 aa		18.02	■□□□□ 0.47
RFX2-222	ENST00000592546	OFD1	O75665	1012 aa		18.01	■□□□□ 0.47
RFX2-222	ENST00000592546	FBLN1	P23142	703 aa		18.01	■□□□□ 0.47
RFX2-222	ENST00000592546	TMPO	P42166	694 aa	Known RBP	18	■□□□□ 0.47
RFX2-222	ENST00000592546	NASP	P49321	788 aa	Predicted RBP	18	■□□□□ 0.47
RFX2-222	ENST00000592546	WAPL	Q7Z5K2	1190 aa		18	■□□□□ 0.47

Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms