RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 VGFO15240 615 aaPredicted RBP11.29□□□□□ -0.6
VAT1-209ENST00000592388 ABCA3Q99758 1704 aa11.29□□□□□ -0.6
VAT1-209ENST00000592388 USP35Q9P2H5 1018 aa11.28□□□□□ -0.6
VAT1-209ENST00000592388 SPATA31A1Q5TZJ5 1347 aa11.28□□□□□ -0.6
VAT1-209ENST00000592388 SBNO1A3KN83 1393 aa11.28□□□□□ -0.6
VAT1-209ENST00000592388 KIF1AQ12756 1690 aa11.27□□□□□ -0.6
VAT1-209ENST00000592388 GPR162Q16538 588 aa11.27□□□□□ -0.61
VAT1-209ENST00000592388 PLEKHH1Q9ULM0 1364 aa11.27□□□□□ -0.61
VAT1-209ENST00000592388 CAPN15O75808 1086 aa11.26□□□□□ -0.61
VAT1-209ENST00000592388 STRN4Q9NRL3 753 aa11.26□□□□□ -0.61
VAT1-209ENST00000592388 COL14A1Q05707 1796 aaKnown RBP11.26□□□□□ -0.61
VAT1-209ENST00000592388 RRBP1Q9P2E9 1410 aaKnown RBP11.26□□□□□ -0.61
VAT1-209ENST00000592388 BCL11BQ9C0K0 894 aaPredicted RBP11.25□□□□□ -0.61
VAT1-209ENST00000592388 PRDM11Q9NQV5 511 aa11.25□□□□□ -0.61
VAT1-209ENST00000592388 CASZ1Q86V15 1759 aa11.25□□□□□ -0.61
VAT1-209ENST00000592388 PMFBP1Q8TBY8 1022 aa11.24□□□□□ -0.61
VAT1-209ENST00000592388 FMN2Q9NZ56 1722 aa11.23□□□□□ -0.61
VAT1-209ENST00000592388 HSPA6P17066 643 aa11.23□□□□□ -0.61
VAT1-209ENST00000592388 CHRNA2Q15822 529 aa11.23□□□□□ -0.61
VAT1-209ENST00000592388 PELP1Q8IZL8 1130 aaKnown RBP11.23□□□□□ -0.61
VAT1-209ENST00000592388 TECPR2O15040 1411 aa11.23□□□□□ -0.61
VAT1-209ENST00000592388 DLC1Q96QB1 1528 aa11.23□□□□□ -0.61
VAT1-209ENST00000592388 GOLGB1Q14789 3259 aaKnown RBP11.22□□□□□ -0.61
VAT1-209ENST00000592388 RGPD8O14715 1765 aaPredicted RBP11.21□□□□□ -0.61
VAT1-209ENST00000592388 PPLO60437 1756 aa11.21□□□□□ -0.61
VAT1-209ENST00000592388 NRXN1Q9ULB1 1477 aa11.21□□□□□ -0.61
VAT1-209ENST00000592388 PLSCR1O15162 318 aa11.21□□□□□ -0.61
VAT1-209ENST00000592388 ARXQ96QS3 562 aa11.21□□□□□ -0.61
VAT1-209ENST00000592388 SHANK3Q9BYB0 1731 aa11.21□□□□□ -0.62
VAT1-209ENST00000592388 TMEM132EQ6IEE7 984 aa11.2□□□□□ -0.62
VAT1-209ENST00000592388 BARGINQ6ZT62 677 aa11.2□□□□□ -0.62
VAT1-209ENST00000592388 SGIP1Q9BQI5 828 aa11.2□□□□□ -0.62
VAT1-209ENST00000592388 MTFR1LQ9H019 292 aa11.2□□□□□ -0.62
VAT1-209ENST00000592388 EVA1CP58658 441 aa11.19□□□□□ -0.62
VAT1-209ENST00000592388 KLHL34Q8N239 644 aa11.19□□□□□ -0.62
VAT1-209ENST00000592388 PROM2Q8N271 834 aa11.19□□□□□ -0.62
VAT1-209ENST00000592388 STK32BQ9NY57 414 aa11.19□□□□□ -0.62
VAT1-209ENST00000592388 KIAA0232Q92628 1395 aa11.18□□□□□ -0.62
VAT1-209ENST00000592388 RPGRIP1LQ68CZ1 1315 aa11.18□□□□□ -0.62
VAT1-209ENST00000592388 PTF1AQ7RTS3 328 aa11.18□□□□□ -0.62
VAT1-209ENST00000592388 ZC3H6P61129 1189 aaKnown RBP11.17□□□□□ -0.62
VAT1-209ENST00000592388 SLC15A2Q16348 729 aa11.17□□□□□ -0.62
VAT1-209ENST00000592388 LARP1Q6PKG0 1096 aaKnown RBP11.17□□□□□ -0.62
VAT1-209ENST00000592388 TCP11L2Q8N4U5 519 aa11.17□□□□□ -0.62
VAT1-209ENST00000592388 IFT172Q9UG01 1749 aa11.17□□□□□ -0.62
VAT1-209ENST00000592388 ABCC11Q96J66 1382 aa11.16□□□□□ -0.62
VAT1-209ENST00000592388 PAK3O75914 559 aaPredicted RBP11.16□□□□□ -0.62
VAT1-209ENST00000592388 SAFB2Q14151 953 aaKnown RBP eCLIP11.16□□□□□ -0.62
VAT1-209ENST00000592388 GPBP1L1Q9HC44 474 aaPredicted RBP11.16□□□□□ -0.62
VAT1-209ENST00000592388 ADGRF5Q8IZF2 1346 aa11.15□□□□□ -0.62
VAT1-209ENST00000592388 COL13A1Q5TAT6 717 aaPredicted RBP11.15□□□□□ -0.62
VAT1-209ENST00000592388 ATP10DQ9P241 1426 aa11.15□□□□□ -0.62
VAT1-209ENST00000592388 GPRASP1Q5JY77 1395 aa11.15□□□□□ -0.63
VAT1-209ENST00000592388 MAP3K5Q99683 1374 aa11.15□□□□□ -0.63
VAT1-209ENST00000592388 C11orf95C9JLR9 678 aaPredicted RBP11.14□□□□□ -0.63
VAT1-209ENST00000592388 TXNRD1Q16881 649 aa11.14□□□□□ -0.63
VAT1-209ENST00000592388 ZNF526Q8TF50 670 aaPredicted RBP11.14□□□□□ -0.63
VAT1-209ENST00000592388 SSH2Q76I76 1423 aa11.14□□□□□ -0.63
VAT1-209ENST00000592388 TRPM3Q9HCF6 1732 aaPredicted RBP11.13□□□□□ -0.63
VAT1-209ENST00000592388 OVOS2A0A0G2JMS6 1433 aa11.13□□□□□ -0.63
VAT1-209ENST00000592388 OVOS2A0A0J9YW53 1432 aa11.13□□□□□ -0.63
VAT1-209ENST00000592388 OVOS2Q6IE36 1432 aa11.13□□□□□ -0.63
VAT1-209ENST00000592388 ALS2Q96Q42 1657 aa11.13□□□□□ -0.63
VAT1-209ENST00000592388 ACIN1Q9UKV3 1341 aaKnown RBP11.12□□□□□ -0.63
VAT1-209ENST00000592388 SLC34A2O95436 690 aa11.12□□□□□ -0.63
VAT1-209ENST00000592388 PRELPP51888 382 aa11.12□□□□□ -0.63
VAT1-209ENST00000592388 RGPD3A6NKT7 1758 aaPredicted RBP11.12□□□□□ -0.63
VAT1-209ENST00000592388 RGPD4Q7Z3J3 1758 aa11.12□□□□□ -0.63
VAT1-209ENST00000592388 YTHDC2Q9H6S0 1430 aaKnown RBP11.11□□□□□ -0.63
VAT1-209ENST00000592388 NUTM2GQ5VZR2 741 aa11.11□□□□□ -0.63
VAT1-209ENST00000592388 NLGN2Q8NFZ4 835 aa11.11□□□□□ -0.63
VAT1-209ENST00000592388 YBX3P16989 372 aaKnown RBP eCLIP11.1□□□□□ -0.633e-16■□□□□ 10.8
VAT1-209ENST00000592388 TNS4Q8IZW8 715 aa11.1□□□□□ -0.63
VAT1-209ENST00000592388 NGDNQ8NEJ9 315 aaKnown RBP11.1□□□□□ -0.63
VAT1-209ENST00000592388 THRAP3Q9Y2W1 955 aaKnown RBP11.1□□□□□ -0.63
VAT1-209ENST00000592388 KNDC1Q76NI1 1749 aa11.09□□□□□ -0.63
VAT1-209ENST00000592388 CRYBG1Q9Y4K1 1723 aa11.09□□□□□ -0.63
VAT1-209ENST00000592388 GRIN3BO60391 1043 aa11.09□□□□□ -0.63
VAT1-209ENST00000592388 RGL3Q3MIN7 710 aa11.09□□□□□ -0.63
VAT1-209ENST00000592388 DNAJC5GQ8N7S2 189 aa11.09□□□□□ -0.63
VAT1-209ENST00000592388 SIRT1Q96EB6 747 aa11.09□□□□□ -0.63
VAT1-209ENST00000592388 PRAM1Q96QH2 718 aa11.09□□□□□ -0.63
VAT1-209ENST00000592388 SBF2Q86WG5 1849 aa11.08□□□□□ -0.64
VAT1-209ENST00000592388 APLP1P51693 650 aa11.08□□□□□ -0.64
VAT1-209ENST00000592388 DDB1Q16531 1140 aa11.08□□□□□ -0.64
VAT1-209ENST00000592388 PEAK1Q9H792 1746 aa11.08□□□□□ -0.64
VAT1-209ENST00000592388 ANKARQ7Z5J8 1434 aa11.08□□□□□ -0.64
VAT1-209ENST00000592388 POLD1P28340 1107 aa11.07□□□□□ -0.64
VAT1-209ENST00000592388 HIRIP3Q9BW71 556 aaPredicted RBP11.07□□□□□ -0.64
VAT1-209ENST00000592388 SLC4A1APQ9BWU0 796 aaKnown RBP11.07□□□□□ -0.64
VAT1-209ENST00000592388 PARP4Q9UKK3 1724 aaKnown RBP11.06□□□□□ -0.64
VAT1-209ENST00000592388 DHX57Q6P158 1386 aaKnown RBP11.06□□□□□ -0.64
VAT1-209ENST00000592388 MARCH10Q8NA82 808 aaPredicted RBP11.06□□□□□ -0.64
VAT1-209ENST00000592388 POGKQ9P215 609 aa11.06□□□□□ -0.64
VAT1-209ENST00000592388 PRR36Q9H6K5 1346 aa11.06□□□□□ -0.64
VAT1-209ENST00000592388 ATP7BP35670 1465 aa11.06□□□□□ -0.64
VAT1-209ENST00000592388 PHRF1Q9P1Y6 1649 aaKnown RBP11.03□□□□□ -0.64
VAT1-209ENST00000592388 KIF3CO14782 793 aa11.03□□□□□ -0.64
VAT1-209ENST00000592388 ZNF827Q17R98 1081 aa11.03□□□□□ -0.64
VAT1-209ENST00000592388 SPATA31E1Q6ZUB1 1445 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms