RNA–Protein interactions for RNA: ENST00000592361.2

MBD3-210, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 907 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-210ENST00000592361 CCDC9Q9Y3X0 531 aaKnown RBP24.58■■□□□ 1.53
MBD3-210ENST00000592361 NUDT16Q96DE0 195 aaKnown RBP24.57■■□□□ 1.52
MBD3-210ENST00000592361 TRPM1Q7Z4N2 1603 aa24.54■■□□□ 1.52
MBD3-210ENST00000592361 CDK19Q9BWU1 502 aa24.54■■□□□ 1.52
MBD3-210ENST00000592361 CENPJQ9HC77 1338 aaPredicted RBP24.53■■□□□ 1.52
MBD3-210ENST00000592361 CCDC61Q9Y6R9 512 aa24.52■■□□□ 1.52
MBD3-210ENST00000592361 POLR3AO14802 1390 aaPredicted RBP24.51■■□□□ 1.51
MBD3-210ENST00000592361 BLMP54132 1417 aaPredicted RBP24.5■■□□□ 1.51
MBD3-210ENST00000592361 A0A0G2JS52 829 aa24.49■■□□□ 1.51
MBD3-210ENST00000592361 FAM83GA6ND36 823 aa24.49■■□□□ 1.51
MBD3-210ENST00000592361 MYT1Q01538 1121 aa24.49■■□□□ 1.51
MBD3-210ENST00000592361 PRDM11Q9NQV5 511 aa24.49■■□□□ 1.51
MBD3-210ENST00000592361 BTG4Q9NY30 223 aa24.49■■□□□ 1.51
MBD3-210ENST00000592361 SRPK2P78362 688 aaKnown RBP24.48■■□□□ 1.51
MBD3-210ENST00000592361 SF3B2Q13435 895 aaKnown RBP24.48■■□□□ 1.51
MBD3-210ENST00000592361 SEPT12Q8IYM1 358 aa24.48■■□□□ 1.51
MBD3-210ENST00000592361 NBPF1Q3BBV0 1214 aa24.47■■□□□ 1.51
MBD3-210ENST00000592361 ACEP12821 1306 aa24.46■■□□□ 1.51
MBD3-210ENST00000592361 PPIP5K1Q6PFW1 1433 aa24.45■■□□□ 1.51
MBD3-210ENST00000592361 BRD4O60885 1362 aaPredicted RBP24.45■■□□□ 1.5
MBD3-210ENST00000592361 PLEKHG3A1L390 1219 aa24.45■■□□□ 1.5
MBD3-210ENST00000592361 RGPD1P0DJD0 1748 aa24.44■■□□□ 1.5
MBD3-210ENST00000592361 ONECUT3O60422 494 aaPredicted RBP24.44■■□□□ 1.5
MBD3-210ENST00000592361 ZRANB1Q9UGI0 708 aa24.44■■□□□ 1.5
MBD3-210ENST00000592361 NRKQ7Z2Y5 1582 aa24.44■■□□□ 1.5
MBD3-210ENST00000592361 NBPF8Q3BBV2 869 aa24.43■■□□□ 1.5
MBD3-210ENST00000592361 KRT27Q7Z3Y8 459 aa24.43■■□□□ 1.5
MBD3-210ENST00000592361 L3MBTL2Q969R5 705 aa24.43■■□□□ 1.5
MBD3-210ENST00000592361 THSD7AQ9UPZ6 1657 aa24.41■■□□□ 1.5
MBD3-210ENST00000592361 ROCK2O75116 1388 aaKnown RBP24.41■■□□□ 1.5
MBD3-210ENST00000592361 KIAA0232Q92628 1395 aa24.41■■□□□ 1.5
MBD3-210ENST00000592361 ABTB2Q8N961 1025 aa24.4■■□□□ 1.5
MBD3-210ENST00000592361 EVC2Q86UK5 1308 aa24.39■■□□□ 1.5
MBD3-210ENST00000592361 FAM98CQ17RN3 349 aaKnown RBP24.39■■□□□ 1.49
MBD3-210ENST00000592361 SPATA31A5Q5VU36 1347 aa24.38■■□□□ 1.49
MBD3-210ENST00000592361 SPATA31A7Q8IWB4 1347 aa24.38■■□□□ 1.49
MBD3-210ENST00000592361 AKAP12Q02952 1782 aa24.37■■□□□ 1.49
MBD3-210ENST00000592361 NEUROD1Q13562 356 aa24.37■■□□□ 1.49
MBD3-210ENST00000592361 NLRP13Q86W25 1043 aa24.36■■□□□ 1.49
MBD3-210ENST00000592361 CABP2Q9NPB3 220 aa24.35■■□□□ 1.49
MBD3-210ENST00000592361 LMO7Q8WWI1 1683 aa24.34■■□□□ 1.49
MBD3-210ENST00000592361 CPDO75976 1380 aa24.34■■□□□ 1.49
MBD3-210ENST00000592361 NUTM2GQ5VZR2 741 aa24.34■■□□□ 1.49
MBD3-210ENST00000592361 SIN3AQ96ST3 1273 aa24.34■■□□□ 1.49
MBD3-210ENST00000592361 ZC3H6P61129 1189 aaKnown RBP24.33■■□□□ 1.49
MBD3-210ENST00000592361 USP6P35125 1406 aa24.33■■□□□ 1.49
MBD3-210ENST00000592361 USP19O94966 1318 aa24.33■■□□□ 1.48
MBD3-210ENST00000592361 EVA1CP58658 441 aa24.32■■□□□ 1.48
MBD3-210ENST00000592361 STRN4Q9NRL3 753 aa24.32■■□□□ 1.48
MBD3-210ENST00000592361 BAG6P46379 1132 aa24.31■■□□□ 1.48
MBD3-210ENST00000592361 CHRNA2Q15822 529 aa24.31■■□□□ 1.48
MBD3-210ENST00000592361 SPATA31A1Q5TZJ5 1347 aa24.31■■□□□ 1.48
MBD3-210ENST00000592361 PIK3C2AO00443 1686 aa24.3■■□□□ 1.48
MBD3-210ENST00000592361 TNS1Q9HBL0 1735 aaKnown RBP24.3■■□□□ 1.48
MBD3-210ENST00000592361 SSH2Q76I76 1423 aa24.29■■□□□ 1.48
MBD3-210ENST00000592361 CABP1Q9NZU7 370 aa24.28■■□□□ 1.48
MBD3-210ENST00000592361 TONSLQ96HA7 1378 aa24.28■■□□□ 1.48
MBD3-210ENST00000592361 SLIT3O75094 1523 aa24.27■■□□□ 1.48
MBD3-210ENST00000592361 MON2Q7Z3U7 1717 aa24.27■■□□□ 1.48
MBD3-210ENST00000592361 CAMTA1Q9Y6Y1 1673 aa24.26■■□□□ 1.47
MBD3-210ENST00000592361 PARP4Q9UKK3 1724 aaKnown RBP24.26■■□□□ 1.47
MBD3-210ENST00000592361 SBNO2Q9Y2G9 1366 aa24.26■■□□□ 1.47
MBD3-210ENST00000592361 GCP02774 474 aa24.25■■□□□ 1.47
MBD3-210ENST00000592361 DEFB132Q7Z7B7 95 aa24.25■■□□□ 1.47
MBD3-210ENST00000592361 ZNF692Q9BU19 519 aaPredicted RBP24.25■■□□□ 1.47
MBD3-210ENST00000592361 NLRP6P59044 892 aa24.24■■□□□ 1.47
MBD3-210ENST00000592361 WNK3Q9BYP7 1800 aa24.23■■□□□ 1.47
MBD3-210ENST00000592361 SRCAPQ6ZRS2 3230 aa24.22■■□□□ 1.47
MBD3-210ENST00000592361 COL5A2P05997 1499 aaPredicted RBP24.22■■□□□ 1.47
MBD3-210ENST00000592361 BARGINQ6ZT62 677 aa24.22■■□□□ 1.47
MBD3-210ENST00000592361 USP35Q9P2H5 1018 aa24.22■■□□□ 1.47
MBD3-210ENST00000592361 THRAP3Q9Y2W1 955 aaKnown RBP24.22■■□□□ 1.47
MBD3-210ENST00000592361 FAM196AQ6ZSG2 479 aa24.21■■□□□ 1.47
MBD3-210ENST00000592361 TTC21AQ8NDW8 1320 aa24.2■■□□□ 1.46
MBD3-210ENST00000592361 PDE3BQ13370 1112 aa24.2■■□□□ 1.46
MBD3-210ENST00000592361 TCP11L2Q8N4U5 519 aa24.2■■□□□ 1.46
MBD3-210ENST00000592361 CARD11Q9BXL7 1154 aa24.2■■□□□ 1.46
MBD3-210ENST00000592361 DISP2A7MBM2 1401 aa24.19■■□□□ 1.46
MBD3-210ENST00000592361 CRB1P82279 1406 aa24.19■■□□□ 1.46
MBD3-210ENST00000592361 RGPD5Q99666 1765 aa24.19■■□□□ 1.46
MBD3-210ENST00000592361 AATKQ6ZMQ8 1374 aa24.18■■□□□ 1.46
MBD3-210ENST00000592361 KCNH5Q8NCM2 988 aa24.18■■□□□ 1.46
MBD3-210ENST00000592361 USP54Q70EL1 1684 aa24.18■■□□□ 1.46
MBD3-210ENST00000592361 LRP5O75197 1615 aa24.17■■□□□ 1.46
MBD3-210ENST00000592361 KTN1Q86UP2 1357 aaKnown RBP24.17■■□□□ 1.46
MBD3-210ENST00000592361 COL18A1P39060 1754 aa24.17■■□□□ 1.46
MBD3-210ENST00000592361 ZBTB7CA1YPR0 619 aa24.17■■□□□ 1.46
MBD3-210ENST00000592361 C11orf95C9JLR9 678 aaPredicted RBP24.17■■□□□ 1.46
MBD3-210ENST00000592361 LARP1Q6PKG0 1096 aaKnown RBP24.17■■□□□ 1.46
MBD3-210ENST00000592361 ABCC6O95255 1503 aa24.16■■□□□ 1.46
MBD3-210ENST00000592361 CPSF1Q10570 1443 aaKnown RBP24.15■■□□□ 1.46
MBD3-210ENST00000592361 PARD3Q8TEW0 1356 aa24.15■■□□□ 1.46
MBD3-210ENST00000592361 TTC21BQ7Z4L5 1316 aa24.14■■□□□ 1.46
MBD3-210ENST00000592361 LTN1O94822 1766 aa24.14■■□□□ 1.45
MBD3-210ENST00000592361 FAM182BQ5T319 152 aa24.13■■□□□ 1.45
MBD3-210ENST00000592361 LRRC37A3O60309 1634 aa24.13■■□□□ 1.45
MBD3-210ENST00000592361 RREB1Q92766 1687 aa24.11■■□□□ 1.45
MBD3-210ENST00000592361 SLC24A1O60721 1099 aa24.11■■□□□ 1.45
MBD3-210ENST00000592361 TRIM26Q12899 539 aaPredicted RBP24.11■■□□□ 1.45
MBD3-210ENST00000592361 SBF2Q86WG5 1849 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms