RNA–Protein interactions for RNA: ENST00000591471.5

HKR1-223, Transcript of HKR1, GLI-Kruppel zinc finger family member, human

TSL 2 BASIC

Gene HKR1, Length 3,472 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HKR1-223	ENST00000591471	C1orf167	Q5SNV9	1468 aa		10.19	□□□□□ -0.78
HKR1-223	ENST00000591471	AATK	Q6ZMQ8	1374 aa		10.19	□□□□□ -0.78
HKR1-223	ENST00000591471	CARD14	Q9BXL6	1004 aa		10.19	□□□□□ -0.78
HKR1-223	ENST00000591471	CABP2	Q9NPB3	220 aa		10.19	□□□□□ -0.78
HKR1-223	ENST00000591471	CRYBG1	Q9Y4K1	1723 aa		10.19	□□□□□ -0.78
HKR1-223	ENST00000591471	TSHZ2	Q9NRE2	1034 aa		10.19	□□□□□ -0.78
HKR1-223	ENST00000591471	OVOS2	A0A0J9YW53	1432 aa		10.18	□□□□□ -0.78
HKR1-223	ENST00000591471	OVOS2	Q6IE36	1432 aa		10.18	□□□□□ -0.78
HKR1-223	ENST00000591471	TMEM94	Q12767	1356 aa		10.18	□□□□□ -0.78
HKR1-223	ENST00000591471	MSH6	P52701	1360 aa		10.17	□□□□□ -0.78
HKR1-223	ENST00000591471	KIF24	Q5T7B8	1368 aa		10.17	□□□□□ -0.78
HKR1-223	ENST00000591471	SLIT3	O75094	1523 aa		10.17	□□□□□ -0.78
HKR1-223	ENST00000591471	SHPRH	Q149N8	1683 aa		10.17	□□□□□ -0.78
HKR1-223	ENST00000591471	AHDC1	Q5TGY3	1603 aa	Predicted RBP	10.17	□□□□□ -0.78
HKR1-223	ENST00000591471	HSPA2	P54652	639 aa		10.16	□□□□□ -0.78
HKR1-223	ENST00000591471	SLC12A5	Q9H2X9	1139 aa		10.16	□□□□□ -0.78
HKR1-223	ENST00000591471	ZBED9	Q6R2W3	1325 aa		10.16	□□□□□ -0.78
HKR1-223	ENST00000591471	CADPS2	Q86UW7	1296 aa		10.16	□□□□□ -0.78
HKR1-223	ENST00000591471	IRX6	P78412	446 aa	Predicted RBP	10.16	□□□□□ -0.78
HKR1-223	ENST00000591471	SBNO1	A3KN83	1393 aa		10.16	□□□□□ -0.78
HKR1-223	ENST00000591471	NLRP13	Q86W25	1043 aa		10.15	□□□□□ -0.78
HKR1-223	ENST00000591471	PROSER2	Q86WR7	435 aa	Predicted RBP	10.15	□□□□□ -0.78
HKR1-223	ENST00000591471	CABP1	Q9NZU7	370 aa		10.15	□□□□□ -0.78
HKR1-223	ENST00000591471	COL22A1	Q8NFW1	1626 aa	Predicted RBP	10.15	□□□□□ -0.78
HKR1-223	ENST00000591471	PXDN	Q92626	1479 aa		10.14	□□□□□ -0.79
HKR1-223	ENST00000591471	PNPLA6	Q8IY17	1366 aa		10.14	□□□□□ -0.79
HKR1-223	ENST00000591471	COL3A1	P02461	1466 aa	Predicted RBP	10.14	□□□□□ -0.79
HKR1-223	ENST00000591471	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.14	□□□□□ -0.79
HKR1-223	ENST00000591471	NCBP3	Q53F19	620 aa	Known RBP	10.13	□□□□□ -0.79
HKR1-223	ENST00000591471	ACE	P12821	1306 aa		10.13	□□□□□ -0.79
HKR1-223	ENST00000591471	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
HKR1-223	ENST00000591471	CAMTA1	Q9Y6Y1	1673 aa		10.12	□□□□□ -0.79
HKR1-223	ENST00000591471	PLEKHG2	Q9H7P9	1386 aa		10.12	□□□□□ -0.79
HKR1-223	ENST00000591471	RGPD1	P0DJD0	1748 aa		10.12	□□□□□ -0.79
HKR1-223	ENST00000591471	ABCA3	Q99758	1704 aa		10.12	□□□□□ -0.79
HKR1-223	ENST00000591471	TTC21B	Q7Z4L5	1316 aa		10.12	□□□□□ -0.79
HKR1-223	ENST00000591471	NFAT5	O94916	1531 aa		10.11	□□□□□ -0.79
HKR1-223	ENST00000591471	FAM208A	Q9UK61	1670 aa	Known RBP	10.11	□□□□□ -0.79
HKR1-223	ENST00000591471	FYB1	O15117	783 aa		10.11	□□□□□ -0.79
HKR1-223	ENST00000591471	TMC1	Q8TDI8	760 aa		10.11	□□□□□ -0.79
HKR1-223	ENST00000591471	PHF8	Q9UPP1	1060 aa		10.11	□□□□□ -0.79
HKR1-223	ENST00000591471	BLM	P54132	1417 aa	Predicted RBP	10.11	□□□□□ -0.79
HKR1-223	ENST00000591471	PNISR	Q8TF01	805 aa	Known RBP	10.11	□□□□□ -0.79
HKR1-223	ENST00000591471	RTL1	A6NKG5	1358 aa		10.1	□□□□□ -0.79
HKR1-223	ENST00000591471	MAP2	P11137	1827 aa	Known RBP	10.1	□□□□□ -0.79
HKR1-223	ENST00000591471	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	10.1	□□□□□ -0.79
HKR1-223	ENST00000591471	PPP2R1A	P30153	589 aa		10.1	□□□□□ -0.79
HKR1-223	ENST00000591471	ATF3	P18847	181 aa		10.1	□□□□□ -0.79
HKR1-223	ENST00000591471	USP19	O94966	1318 aa		10.09	□□□□□ -0.79
HKR1-223	ENST00000591471	SENP3-EIF4A1	A0A087X0R7	540 aa		10.09	□□□□□ -0.79
HKR1-223	ENST00000591471	ROBO1	Q9Y6N7	1651 aa		10.09	□□□□□ -0.79
HKR1-223	ENST00000591471	LTN1	O94822	1766 aa		10.08	□□□□□ -0.8
HKR1-223	ENST00000591471	NGEF	Q8N5V2	710 aa		10.08	□□□□□ -0.8
HKR1-223	ENST00000591471	PEAK1	Q9H792	1746 aa		10.08	□□□□□ -0.8
HKR1-223	ENST00000591471	PSME1	Q06323	249 aa		10.08	□□□□□ -0.8
HKR1-223	ENST00000591471	TNS3	Q68CZ2	1445 aa		10.08	□□□□□ -0.8
HKR1-223	ENST00000591471	NPHP3	Q7Z494	1330 aa		10.07	□□□□□ -0.8
HKR1-223	ENST00000591471	ARHGEF10	O15013	1369 aa		10.07	□□□□□ -0.8
HKR1-223	ENST00000591471	LMO7	Q8WWI1	1683 aa		10.07	□□□□□ -0.8
HKR1-223	ENST00000591471	MORC1	Q86VD1	984 aa		10.07	□□□□□ -0.8
HKR1-223	ENST00000591471	ERICH6B	Q5W0A0	696 aa		10.06	□□□□□ -0.8
HKR1-223	ENST00000591471	SOS2	Q07890	1332 aa	Predicted RBP	10.06	□□□□□ -0.8
HKR1-223	ENST00000591471	COL18A1	P39060	1754 aa		10.05	□□□□□ -0.8
HKR1-223	ENST00000591471	COG3	Q96JB2	828 aa		10.05	□□□□□ -0.8
HKR1-223	ENST00000591471	NCAPD2	Q15021	1401 aa		10.05	□□□□□ -0.8
HKR1-223	ENST00000591471	COL16A1	Q07092	1604 aa	Predicted RBP	10.05	□□□□□ -0.8
HKR1-223	ENST00000591471	NGDN	Q8NEJ9	315 aa	Known RBP	10.05	□□□□□ -0.8
HKR1-223	ENST00000591471	PPP4R2	Q9NY27	417 aa		10.05	□□□□□ -0.8
HKR1-223	ENST00000591471	NUDC	Q9Y266	331 aa		10.05	□□□□□ -0.8
HKR1-223	ENST00000591471	CC2D1B	Q5T0F9	858 aa	Known RBP	10.04	□□□□□ -0.8
HKR1-223	ENST00000591471	KCNH5	Q8NCM2	988 aa		10.04	□□□□□ -0.8
HKR1-223	ENST00000591471	SENP3	Q9H4L4	574 aa	Predicted RBP	10.03	□□□□□ -0.8
HKR1-223	ENST00000591471	CPD	O75976	1380 aa		10.03	□□□□□ -0.8
HKR1-223	ENST00000591471	CFAP53	Q96M91	514 aa		10.03	□□□□□ -0.8
HKR1-223	ENST00000591471	SLAIN2	Q9P270	581 aa		10.03	□□□□□ -0.8
HKR1-223	ENST00000591471	ESCO1	Q5FWF5	840 aa		10.03	□□□□□ -0.8
HKR1-223	ENST00000591471	C14orf37	Q86TY3	774 aa		10.03	□□□□□ -0.8
HKR1-223	ENST00000591471	PHLPP1	O60346	1717 aa		10.03	□□□□□ -0.8
HKR1-223	ENST00000591471	PRKCSH	P14314	528 aa	Predicted RBP	10.02	□□□□□ -0.8
HKR1-223	ENST00000591471	BRINP3	Q76B58	766 aa		10.02	□□□□□ -0.8
HKR1-223	ENST00000591471	SPATA31A3	Q5VYP0	1347 aa		10.02	□□□□□ -0.81
HKR1-223	ENST00000591471	RBM19	Q9Y4C8	960 aa	Known RBP	10.01	□□□□□ -0.81
HKR1-223	ENST00000591471	FLT4	P35916	1363 aa		10.01	□□□□□ -0.81
HKR1-223	ENST00000591471	NME9	Q86XW9	330 aa		10.01	□□□□□ -0.81
HKR1-223	ENST00000591471	PNN	Q9H307	717 aa	Known RBP	10.01	□□□□□ -0.81
HKR1-223	ENST00000591471	KRT28	Q7Z3Y7	464 aa		10.01	□□□□□ -0.81
HKR1-223	ENST00000591471	B4GALNT3	Q6L9W6	998 aa		10	□□□□□ -0.81
HKR1-223	ENST00000591471	ORAI2	Q96SN7	254 aa		10	□□□□□ -0.81
HKR1-223	ENST00000591471	POLK	Q9UBT6	870 aa		10	□□□□□ -0.81
HKR1-223	ENST00000591471	COL14A1	Q05707	1796 aa	Known RBP	10	□□□□□ -0.81
HKR1-223	ENST00000591471	GGNBP2	Q9H3C7	697 aa		10	□□□□□ -0.81
HKR1-223	ENST00000591471	PMFBP1	Q8TBY8	1022 aa		9.99	□□□□□ -0.81
HKR1-223	ENST00000591471	PLCH1	Q4KWH8	1693 aa		9.99	□□□□□ -0.81
HKR1-223	ENST00000591471	AEBP2	Q6ZN18	517 aa	Predicted RBP	9.99	□□□□□ -0.81
HKR1-223	ENST00000591471	RNF123	Q5XPI4	1314 aa		9.99	□□□□□ -0.81
HKR1-223	ENST00000591471	SALL2	Q9Y467	1007 aa	Predicted RBP	9.99	□□□□□ -0.81
HKR1-223	ENST00000591471	NWD2	Q9ULI1	1742 aa		9.99	□□□□□ -0.81
HKR1-223	ENST00000591471	MTHFS	P49914	203 aa		9.98	□□□□□ -0.81
HKR1-223	ENST00000591471	KDR	P35968	1356 aa		9.98	□□□□□ -0.81
HKR1-223	ENST00000591471	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	9.97	□□□□□ -0.81	2e-6	■■■□□ 17.9

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms