RNA–Protein interactions for RNA: ENST00000591028.1

NFIX-213, Transcript of nuclear factor I X, humanhuman

TSL 3

Gene NFIX, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-213ENST00000591028 TULP4Q9NRJ4 1543 aa22.5■■□□□ 1.19
NFIX-213ENST00000591028 MINK1Q8N4C8 1332 aaPredicted RBP22.5■■□□□ 1.19
NFIX-213ENST00000591028 ARHGEF10O15013 1369 aa22.49■■□□□ 1.19
NFIX-213ENST00000591028 NRAPQ86VF7 1730 aa22.48■■□□□ 1.19
NFIX-213ENST00000591028 PRR36Q9H6K5 1346 aa22.48■■□□□ 1.19
NFIX-213ENST00000591028 CRYBG1Q9Y4K1 1723 aa22.47■■□□□ 1.19
NFIX-213ENST00000591028 CENPJQ9HC77 1338 aaPredicted RBP22.47■■□□□ 1.19
NFIX-213ENST00000591028 ITSN1Q15811 1721 aa22.46■■□□□ 1.19
NFIX-213ENST00000591028 SBNO2Q9Y2G9 1366 aa22.44■■□□□ 1.18
NFIX-213ENST00000591028 ATP7BP35670 1465 aa22.41■■□□□ 1.18
NFIX-213ENST00000591028 COL14A1Q05707 1796 aaKnown RBP22.41■■□□□ 1.18
NFIX-213ENST00000591028 VPS72Q15906 364 aa22.41■■□□□ 1.18
NFIX-213ENST00000591028 CCDC9Q9Y3X0 531 aaKnown RBP22.41■■□□□ 1.18
NFIX-213ENST00000591028 WASLO00401 505 aaPredicted RBP22.4■■□□□ 1.18
NFIX-213ENST00000591028 USP47Q96K76 1375 aa22.39■■□□□ 1.18
NFIX-213ENST00000591028 SEPT12Q8IYM1 358 aa22.39■■□□□ 1.17
NFIX-213ENST00000591028 TOPAZ1Q8N9V7 1692 aa22.39■■□□□ 1.17
NFIX-213ENST00000591028 FAM83GA6ND36 823 aa22.38■■□□□ 1.17
NFIX-213ENST00000591028 PHRF1Q9P1Y6 1649 aaKnown RBP22.38■■□□□ 1.17
NFIX-213ENST00000591028 BLMP54132 1417 aaPredicted RBP22.37■■□□□ 1.17
NFIX-213ENST00000591028 EIF4G2P78344 907 aaKnown RBP eCLIP22.36■■□□□ 1.172e-6■■■■■ 26.9
NFIX-213ENST00000591028 EVC2Q86UK5 1308 aa22.35■■□□□ 1.17
NFIX-213ENST00000591028 CCDC125Q86Z20 511 aa22.35■■□□□ 1.17
NFIX-213ENST00000591028 NGDNQ8NEJ9 315 aaKnown RBP22.35■■□□□ 1.17
NFIX-213ENST00000591028 QRICH2Q9H0J4 1663 aa22.34■■□□□ 1.17
NFIX-213ENST00000591028 BTG4Q9NY30 223 aa22.34■■□□□ 1.17
NFIX-213ENST00000591028 ZRANB1Q9UGI0 708 aa22.34■■□□□ 1.17
NFIX-213ENST00000591028 A0A0G2JS52 829 aa22.33■■□□□ 1.17
NFIX-213ENST00000591028 PAK3O75914 559 aaPredicted RBP22.33■■□□□ 1.17
NFIX-213ENST00000591028 MYT1Q01538 1121 aa22.33■■□□□ 1.17
NFIX-213ENST00000591028 DEFB132Q7Z7B7 95 aa22.32■■□□□ 1.16
NFIX-213ENST00000591028 CDCA8Q53HL2 280 aa22.31■■□□□ 1.16
NFIX-213ENST00000591028 FAM98CQ17RN3 349 aaKnown RBP22.3■■□□□ 1.16
NFIX-213ENST00000591028 KRT27Q7Z3Y8 459 aa22.3■■□□□ 1.16
NFIX-213ENST00000591028 NUDT16Q96DE0 195 aaKnown RBP22.3■■□□□ 1.16
NFIX-213ENST00000591028 THSD7AQ9UPZ6 1657 aa22.3■■□□□ 1.16
NFIX-213ENST00000591028 ST20-MTHFSA0A0A6YYL1 179 aa22.29■■□□□ 1.16
NFIX-213ENST00000591028 ONECUT3O60422 494 aaPredicted RBP22.29■■□□□ 1.16
NFIX-213ENST00000591028 PUS7Q96PZ0 661 aaKnown RBP22.29■■□□□ 1.16
NFIX-213ENST00000591028 TMF1P82094 1093 aa22.27■■□□□ 1.16
NFIX-213ENST00000591028 NRKQ7Z2Y5 1582 aa22.26■■□□□ 1.15
NFIX-213ENST00000591028 SRPK2P78362 688 aaKnown RBP22.26■■□□□ 1.15
NFIX-213ENST00000591028 CDK19Q9BWU1 502 aa22.26■■□□□ 1.15
NFIX-213ENST00000591028 PRDM11Q9NQV5 511 aa22.26■■□□□ 1.15
NFIX-213ENST00000591028 KIAA0232Q92628 1395 aa22.25■■□□□ 1.15
NFIX-213ENST00000591028 SF3B2Q13435 895 aaKnown RBP22.25■■□□□ 1.15
NFIX-213ENST00000591028 NUTM2GQ5VZR2 741 aa22.25■■□□□ 1.15
NFIX-213ENST00000591028 RGPD1P0DJD0 1748 aa22.25■■□□□ 1.15
NFIX-213ENST00000591028 SPATA31A5Q5VU36 1347 aa22.24■■□□□ 1.15
NFIX-213ENST00000591028 SPATA31A7Q8IWB4 1347 aa22.24■■□□□ 1.15
NFIX-213ENST00000591028 POLR3AO14802 1390 aaPredicted RBP22.24■■□□□ 1.15
NFIX-213ENST00000591028 TNS1Q9HBL0 1735 aaKnown RBP22.23■■□□□ 1.15
NFIX-213ENST00000591028 CHRNA2Q15822 529 aa22.23■■□□□ 1.15
NFIX-213ENST00000591028 TESK2Q96S53 571 aa22.23■■□□□ 1.15
NFIX-213ENST00000591028 ACEP12821 1306 aa22.23■■□□□ 1.15
NFIX-213ENST00000591028 FAM182BQ5T319 152 aa22.22■■□□□ 1.15
NFIX-213ENST00000591028 CCDC61Q9Y6R9 512 aa22.22■■□□□ 1.15
NFIX-213ENST00000591028 NINLQ9Y2I6 1382 aa22.22■■□□□ 1.15
NFIX-213ENST00000591028 HSPA5P11021 654 aaKnown RBP22.2■■□□□ 1.14
NFIX-213ENST00000591028 ZC3H6P61129 1189 aaKnown RBP22.19■■□□□ 1.14
NFIX-213ENST00000591028 LMO7Q8WWI1 1683 aa22.18■■□□□ 1.14
NFIX-213ENST00000591028 STRN4Q9NRL3 753 aa22.18■■□□□ 1.14
NFIX-213ENST00000591028 PPIP5K1Q6PFW1 1433 aa22.17■■□□□ 1.14
NFIX-213ENST00000591028 SPATA31A1Q5TZJ5 1347 aa22.16■■□□□ 1.14
NFIX-213ENST00000591028 PLEKHG3A1L390 1219 aa22.15■■□□□ 1.14
NFIX-213ENST00000591028 LRP5O75197 1615 aa22.15■■□□□ 1.14
NFIX-213ENST00000591028 CAMTA1Q9Y6Y1 1673 aa22.14■■□□□ 1.14
NFIX-213ENST00000591028 BAG6P46379 1132 aa22.14■■□□□ 1.13
NFIX-213ENST00000591028 CABP2Q9NPB3 220 aa22.14■■□□□ 1.13
NFIX-213ENST00000591028 SSH2Q76I76 1423 aa22.14■■□□□ 1.13
NFIX-213ENST00000591028 BRD4O60885 1362 aaPredicted RBP22.13■■□□□ 1.13
NFIX-213ENST00000591028 USP19O94966 1318 aa22.12■■□□□ 1.13
NFIX-213ENST00000591028 PSDA5PKW4 1024 aaPredicted RBP22.12■■□□□ 1.13
NFIX-213ENST00000591028 ABTB2Q8N961 1025 aa22.12■■□□□ 1.13
NFIX-213ENST00000591028 USP35Q9P2H5 1018 aa22.12■■□□□ 1.13
NFIX-213ENST00000591028 EN1Q05925 392 aaPredicted RBP22.11■■□□□ 1.13
NFIX-213ENST00000591028 PIK3C2AO00443 1686 aa22.1■■□□□ 1.13
NFIX-213ENST00000591028 ZNF692Q9BU19 519 aaPredicted RBP22.09■■□□□ 1.13
NFIX-213ENST00000591028 TERF2IPQ9NYB0 399 aa22.09■■□□□ 1.13
NFIX-213ENST00000591028 CPDO75976 1380 aa22.09■■□□□ 1.13
NFIX-213ENST00000591028 DISP2A7MBM2 1401 aa22.08■■□□□ 1.13
NFIX-213ENST00000591028 USP6P35125 1406 aa22.07■■□□□ 1.12
NFIX-213ENST00000591028 LARP1Q6PKG0 1096 aaKnown RBP22.07■■□□□ 1.12
NFIX-213ENST00000591028 HDGFL2Q7Z4V5 671 aaPredicted RBP22.07■■□□□ 1.12
NFIX-213ENST00000591028 EVA1CP58658 441 aa22.06■■□□□ 1.12
NFIX-213ENST00000591028 CABP1Q9NZU7 370 aa22.06■■□□□ 1.12
NFIX-213ENST00000591028 COL5A2P05997 1499 aaPredicted RBP22.06■■□□□ 1.12
NFIX-213ENST00000591028 PARP4Q9UKK3 1724 aaKnown RBP22.06■■□□□ 1.12
NFIX-213ENST00000591028 SLIT3O75094 1523 aa22.06■■□□□ 1.12
NFIX-213ENST00000591028 AKAP12Q02952 1782 aa22.05■■□□□ 1.12
NFIX-213ENST00000591028 TMC1Q8TDI8 760 aa22.05■■□□□ 1.12
NFIX-213ENST00000591028 RREB1Q92766 1687 aa22.04■■□□□ 1.12
NFIX-213ENST00000591028 TRIM37O94972 964 aa22.04■■□□□ 1.12
NFIX-213ENST00000591028 GCP02774 474 aa22.04■■□□□ 1.12
NFIX-213ENST00000591028 ZBTB7CA1YPR0 619 aa22.03■■□□□ 1.12
NFIX-213ENST00000591028 NLRP13Q86W25 1043 aa22.03■■□□□ 1.12
NFIX-213ENST00000591028 WNK3Q9BYP7 1800 aa22.03■■□□□ 1.12
NFIX-213ENST00000591028 EZH2Q15910 746 aaKnown RBP22.02■■□□□ 1.12
NFIX-213ENST00000591028 NUP188Q5SRE5 1749 aa22.02■■□□□ 1.12
NFIX-213ENST00000591028 FAM196AQ6ZSG2 479 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms