RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 NUDT16Q96DE0 195 aaKnown RBP25.9■■□□□ 1.74
VAT1-208ENST00000590924 QRICH2Q9H0J4 1663 aa25.9■■□□□ 1.74
VAT1-208ENST00000590924 FAM83GA6ND36 823 aa25.89■■□□□ 1.74
VAT1-208ENST00000590924 NBPF1Q3BBV0 1214 aa25.86■■□□□ 1.73
VAT1-208ENST00000590924 CDK19Q9BWU1 502 aa25.86■■□□□ 1.73
VAT1-208ENST00000590924 POLR3AO14802 1390 aaPredicted RBP25.85■■□□□ 1.73
VAT1-208ENST00000590924 ONECUT3O60422 494 aaPredicted RBP25.85■■□□□ 1.73
VAT1-208ENST00000590924 PAK3O75914 559 aaPredicted RBP25.84■■□□□ 1.73
VAT1-208ENST00000590924 SEPT12Q8IYM1 358 aa25.84■■□□□ 1.73
VAT1-208ENST00000590924 CCDC9Q9Y3X0 531 aaKnown RBP25.84■■□□□ 1.73
VAT1-208ENST00000590924 TRPM1Q7Z4N2 1603 aa25.84■■□□□ 1.73
VAT1-208ENST00000590924 BLMP54132 1417 aaPredicted RBP25.83■■□□□ 1.73
VAT1-208ENST00000590924 BTG4Q9NY30 223 aa25.82■■□□□ 1.72
VAT1-208ENST00000590924 CCDC61Q9Y6R9 512 aa25.82■■□□□ 1.72
VAT1-208ENST00000590924 ACEP12821 1306 aa25.79■■□□□ 1.72
VAT1-208ENST00000590924 CLSPNQ9HAW4 1339 aa25.79■■□□□ 1.72
VAT1-208ENST00000590924 THSD7AQ9UPZ6 1657 aa25.78■■□□□ 1.72
VAT1-208ENST00000590924 PLEKHG3A1L390 1219 aa25.78■■□□□ 1.72
VAT1-208ENST00000590924 CENPJQ9HC77 1338 aaPredicted RBP25.78■■□□□ 1.72
VAT1-208ENST00000590924 NRKQ7Z2Y5 1582 aa25.78■■□□□ 1.72
VAT1-208ENST00000590924 NBPF8Q3BBV2 869 aa25.76■■□□□ 1.71
VAT1-208ENST00000590924 KRT27Q7Z3Y8 459 aa25.76■■□□□ 1.71
VAT1-208ENST00000590924 PRDM11Q9NQV5 511 aa25.76■■□□□ 1.71
VAT1-208ENST00000590924 L3MBTL2Q969R5 705 aa25.75■■□□□ 1.71
VAT1-208ENST00000590924 PPIP5K1Q6PFW1 1433 aa25.74■■□□□ 1.71
VAT1-208ENST00000590924 KIAA0232Q92628 1395 aa25.74■■□□□ 1.71
VAT1-208ENST00000590924 SPATA31A5Q5VU36 1347 aa25.73■■□□□ 1.71
VAT1-208ENST00000590924 SPATA31A7Q8IWB4 1347 aa25.73■■□□□ 1.71
VAT1-208ENST00000590924 FAM98CQ17RN3 349 aaKnown RBP25.73■■□□□ 1.71
VAT1-208ENST00000590924 ZRANB1Q9UGI0 708 aa25.73■■□□□ 1.71
VAT1-208ENST00000590924 RGPD1P0DJD0 1748 aa25.73■■□□□ 1.71
VAT1-208ENST00000590924 SRPK2P78362 688 aaKnown RBP25.72■■□□□ 1.71
VAT1-208ENST00000590924 LMO7Q8WWI1 1683 aa25.71■■□□□ 1.71
VAT1-208ENST00000590924 A0A0G2JS52 829 aa25.71■■□□□ 1.71
VAT1-208ENST00000590924 MYT1Q01538 1121 aa25.71■■□□□ 1.71
VAT1-208ENST00000590924 SIN3AQ96ST3 1273 aa25.7■■□□□ 1.7
VAT1-208ENST00000590924 BRD4O60885 1362 aaPredicted RBP25.69■■□□□ 1.7
VAT1-208ENST00000590924 SF3B2Q13435 895 aaKnown RBP25.68■■□□□ 1.7
VAT1-208ENST00000590924 NUTM2GQ5VZR2 741 aa25.68■■□□□ 1.7
VAT1-208ENST00000590924 CABP2Q9NPB3 220 aa25.68■■□□□ 1.7
VAT1-208ENST00000590924 USP19O94966 1318 aa25.67■■□□□ 1.7
VAT1-208ENST00000590924 AKAP12Q02952 1782 aa25.67■■□□□ 1.7
VAT1-208ENST00000590924 CHRNA2Q15822 529 aa25.67■■□□□ 1.7
VAT1-208ENST00000590924 ABTB2Q8N961 1025 aa25.67■■□□□ 1.7
VAT1-208ENST00000590924 CCER1Q8TC90 406 aaPredicted RBP25.67■■□□□ 1.7
VAT1-208ENST00000590924 TNS1Q9HBL0 1735 aaKnown RBP25.66■■□□□ 1.7
VAT1-208ENST00000590924 ZC3H6P61129 1189 aaKnown RBP25.66■■□□□ 1.7
VAT1-208ENST00000590924 DEFB132Q7Z7B7 95 aa25.66■■□□□ 1.7
VAT1-208ENST00000590924 CPDO75976 1380 aa25.66■■□□□ 1.7
VAT1-208ENST00000590924 SPATA31A1Q5TZJ5 1347 aa25.65■■□□□ 1.7
VAT1-208ENST00000590924 NEUROD1Q13562 356 aa25.65■■□□□ 1.7
VAT1-208ENST00000590924 SRCAPQ6ZRS2 3230 aa25.65■■□□□ 1.7
VAT1-208ENST00000590924 CAMTA1Q9Y6Y1 1673 aa25.64■■□□□ 1.7
VAT1-208ENST00000590924 USP6P35125 1406 aa25.64■■□□□ 1.7
VAT1-208ENST00000590924 PIK3C2AO00443 1686 aa25.64■■□□□ 1.69
VAT1-208ENST00000590924 ROCK2O75116 1388 aaKnown RBP25.63■■□□□ 1.69
VAT1-208ENST00000590924 SSH2Q76I76 1423 aa25.63■■□□□ 1.69
VAT1-208ENST00000590924 NLRP13Q86W25 1043 aa25.62■■□□□ 1.69
VAT1-208ENST00000590924 EVC2Q86UK5 1308 aa25.62■■□□□ 1.69
VAT1-208ENST00000590924 STRN4Q9NRL3 753 aa25.61■■□□□ 1.69
VAT1-208ENST00000590924 SLIT3O75094 1523 aa25.61■■□□□ 1.69
VAT1-208ENST00000590924 CABP1Q9NZU7 370 aa25.59■■□□□ 1.69
VAT1-208ENST00000590924 TIMELESSQ9UNS1 1208 aa25.58■■□□□ 1.69
VAT1-208ENST00000590924 GCP02774 474 aa25.57■■□□□ 1.68
VAT1-208ENST00000590924 BAG6P46379 1132 aa25.57■■□□□ 1.68
VAT1-208ENST00000590924 PARP4Q9UKK3 1724 aaKnown RBP25.57■■□□□ 1.68
VAT1-208ENST00000590924 COL18A1P39060 1754 aa25.56■■□□□ 1.68
VAT1-208ENST00000590924 MON2Q7Z3U7 1717 aa25.56■■□□□ 1.68
VAT1-208ENST00000590924 DISP2A7MBM2 1401 aa25.55■■□□□ 1.68
VAT1-208ENST00000590924 COL5A2P05997 1499 aaPredicted RBP25.55■■□□□ 1.68
VAT1-208ENST00000590924 EVA1CP58658 441 aa25.55■■□□□ 1.68
VAT1-208ENST00000590924 FAM182BQ5T319 152 aa25.55■■□□□ 1.68
VAT1-208ENST00000590924 BARGINQ6ZT62 677 aa25.55■■□□□ 1.68
VAT1-208ENST00000590924 RGPD5Q99666 1765 aa25.54■■□□□ 1.68
VAT1-208ENST00000590924 WNK3Q9BYP7 1800 aa25.53■■□□□ 1.68
VAT1-208ENST00000590924 TONSLQ96HA7 1378 aa25.53■■□□□ 1.68
VAT1-208ENST00000590924 LRP5O75197 1615 aa25.52■■□□□ 1.68
VAT1-208ENST00000590924 NLRP6P59044 892 aa25.52■■□□□ 1.68
VAT1-208ENST00000590924 SBNO2Q9Y2G9 1366 aa25.52■■□□□ 1.68
VAT1-208ENST00000590924 LARP1Q6PKG0 1096 aaKnown RBP25.51■■□□□ 1.67
VAT1-208ENST00000590924 USP35Q9P2H5 1018 aa25.51■■□□□ 1.67
VAT1-208ENST00000590924 AATKQ6ZMQ8 1374 aa25.49■■□□□ 1.67
VAT1-208ENST00000590924 FAM196AQ6ZSG2 479 aa25.49■■□□□ 1.67
VAT1-208ENST00000590924 TCP11L2Q8N4U5 519 aa25.49■■□□□ 1.67
VAT1-208ENST00000590924 THRAP3Q9Y2W1 955 aaKnown RBP25.49■■□□□ 1.67
VAT1-208ENST00000590924 CPSF1Q10570 1443 aaKnown RBP25.48■■□□□ 1.67
VAT1-208ENST00000590924 ZNF692Q9BU19 519 aaPredicted RBP25.48■■□□□ 1.67
VAT1-208ENST00000590924 USP54Q70EL1 1684 aa25.48■■□□□ 1.67
VAT1-208ENST00000590924 CRB1P82279 1406 aa25.47■■□□□ 1.67
VAT1-208ENST00000590924 RREB1Q92766 1687 aa25.46■■□□□ 1.67
VAT1-208ENST00000590924 EN1Q05925 392 aaPredicted RBP25.46■■□□□ 1.67
VAT1-208ENST00000590924 SBF2Q86WG5 1849 aa25.46■■□□□ 1.67
VAT1-208ENST00000590924 LRRC37A3O60309 1634 aa25.45■■□□□ 1.67
VAT1-208ENST00000590924 TTC21BQ7Z4L5 1316 aa25.45■■□□□ 1.66
VAT1-208ENST00000590924 TTC21AQ8NDW8 1320 aa25.45■■□□□ 1.66
VAT1-208ENST00000590924 PEAK1Q9H792 1746 aa25.43■■□□□ 1.66
VAT1-208ENST00000590924 PDE3BQ13370 1112 aa25.43■■□□□ 1.66
VAT1-208ENST00000590924 TRIM37O94972 964 aa25.42■■□□□ 1.66
VAT1-208ENST00000590924 CARD11Q9BXL7 1154 aa25.42■■□□□ 1.66
VAT1-208ENST00000590924 KTN1Q86UP2 1357 aaKnown RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms