RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 SBNO2Q9Y2G9 1366 aa31.69■■■□□ 2.66
MBD3-208ENST00000590830 HAP1P54257 671 aaPredicted RBP31.67■■■□□ 2.66
MBD3-208ENST00000590830 BCL9LQ86UU0 1499 aa31.66■■■□□ 2.66
MBD3-208ENST00000590830 ST20-MTHFSA0A0A6YYL1 179 aa31.64■■■□□ 2.66
MBD3-208ENST00000590830 MARF1Q9Y4F3 1742 aaKnown RBP31.63■■■□□ 2.65
MBD3-208ENST00000590830 NUTM2GQ5VZR2 741 aa31.63■■■□□ 2.65
MBD3-208ENST00000590830 TESK2Q96S53 571 aa31.63■■■□□ 2.65
MBD3-208ENST00000590830 FAM83GA6ND36 823 aa31.62■■■□□ 2.65
MBD3-208ENST00000590830 RBM6P78332 1123 aaKnown RBP31.62■■■□□ 2.65
MBD3-208ENST00000590830 TRPC5Q9UL62 973 aaPredicted RBP31.61■■■□□ 2.65
MBD3-208ENST00000590830 ABCA3Q99758 1704 aa31.61■■■□□ 2.65
MBD3-208ENST00000590830 SLIT2O94813 1529 aa31.6■■■□□ 2.65
MBD3-208ENST00000590830 ATRNO75882 1429 aa31.59■■■□□ 2.65
MBD3-208ENST00000590830 ABTB2Q8N961 1025 aa31.58■■■□□ 2.65
MBD3-208ENST00000590830 ATAD2Q6PL18 1390 aa31.57■■■□□ 2.64
MBD3-208ENST00000590830 UNC5CLQ8IV45 518 aa31.57■■■□□ 2.64
MBD3-208ENST00000590830 USP6P35125 1406 aa31.57■■■□□ 2.64
MBD3-208ENST00000590830 SSH2Q76I76 1423 aa31.56■■■□□ 2.64
MBD3-208ENST00000590830 BRD4O60885 1362 aaPredicted RBP31.54■■■□□ 2.64
MBD3-208ENST00000590830 CDK12Q9NYV4 1490 aaPredicted RBP31.53■■■□□ 2.64
MBD3-208ENST00000590830 CRYBG1Q9Y4K1 1723 aa31.53■■■□□ 2.64
MBD3-208ENST00000590830 USP47Q96K76 1375 aa31.53■■■□□ 2.64
MBD3-208ENST00000590830 ZNF692Q9BU19 519 aaPredicted RBP31.52■■■□□ 2.64
MBD3-208ENST00000590830 CPSF1Q10570 1443 aaKnown RBP31.51■■■□□ 2.64
MBD3-208ENST00000590830 GJD4Q96KN9 370 aaPredicted RBP31.5■■■□□ 2.63
MBD3-208ENST00000590830 PUS7Q96PZ0 661 aaKnown RBP31.5■■■□□ 2.63
MBD3-208ENST00000590830 RGS12O14924 1447 aa31.49■■■□□ 2.63
MBD3-208ENST00000590830 SLC12A5Q9H2X9 1139 aa31.49■■■□□ 2.63
MBD3-208ENST00000590830 USP19O94966 1318 aa31.49■■■□□ 2.63
MBD3-208ENST00000590830 TTC21BQ7Z4L5 1316 aa31.48■■■□□ 2.63
MBD3-208ENST00000590830 ZC3H6P61129 1189 aaKnown RBP31.47■■■□□ 2.63
MBD3-208ENST00000590830 NLRP13Q86W25 1043 aa31.47■■■□□ 2.63
MBD3-208ENST00000590830 TMC1Q8TDI8 760 aa31.47■■■□□ 2.63
MBD3-208ENST00000590830 BTG4Q9NY30 223 aa31.47■■■□□ 2.63
MBD3-208ENST00000590830 KIAA0232Q92628 1395 aa31.46■■■□□ 2.63
MBD3-208ENST00000590830 CD163L1Q9NR16 1453 aa31.46■■■□□ 2.63
MBD3-208ENST00000590830 VPS72Q15906 364 aa31.45■■■□□ 2.63
MBD3-208ENST00000590830 PRDM11Q9NQV5 511 aa31.45■■■□□ 2.63
MBD3-208ENST00000590830 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.44■■■□□ 2.62
MBD3-208ENST00000590830 NLRP6P59044 892 aa31.44■■■□□ 2.62
MBD3-208ENST00000590830 CHRNA2Q15822 529 aa31.44■■■□□ 2.62
MBD3-208ENST00000590830 KTN1Q86UP2 1357 aaKnown RBP31.43■■■□□ 2.62
MBD3-208ENST00000590830 PHRF1Q9P1Y6 1649 aaKnown RBP31.43■■■□□ 2.62
MBD3-208ENST00000590830 SLC24A1O60721 1099 aa31.43■■■□□ 2.62
MBD3-208ENST00000590830 GCP02774 474 aa31.43■■■□□ 2.62
MBD3-208ENST00000590830 PLCH1Q4KWH8 1693 aa31.43■■■□□ 2.62
MBD3-208ENST00000590830 AKAP12Q02952 1782 aa31.41■■■□□ 2.62
MBD3-208ENST00000590830 NWD2Q9ULI1 1742 aa31.41■■■□□ 2.62
MBD3-208ENST00000590830 COL14A1Q05707 1796 aaKnown RBP31.4■■■□□ 2.62
MBD3-208ENST00000590830 GLI3P10071 1580 aa31.39■■■□□ 2.62
MBD3-208ENST00000590830 TMF1P82094 1093 aa31.38■■■□□ 2.61
MBD3-208ENST00000590830 TTC21AQ8NDW8 1320 aa31.38■■■□□ 2.61
MBD3-208ENST00000590830 NRKQ7Z2Y5 1582 aa31.38■■■□□ 2.61
MBD3-208ENST00000590830 PIK3C2AO00443 1686 aa31.38■■■□□ 2.61
MBD3-208ENST00000590830 CPDO75976 1380 aa31.36■■■□□ 2.61
MBD3-208ENST00000590830 HDGFL2Q7Z4V5 671 aaPredicted RBP31.36■■■□□ 2.61
MBD3-208ENST00000590830 ZRANB1Q9UGI0 708 aa31.36■■■□□ 2.61
MBD3-208ENST00000590830 CCDC9Q9Y3X0 531 aaKnown RBP31.36■■■□□ 2.61
MBD3-208ENST00000590830 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.35■■■□□ 2.61
MBD3-208ENST00000590830 NRAPQ86VF7 1730 aa31.35■■■□□ 2.61
MBD3-208ENST00000590830 A0A1W2PP64 1363 aa31.34■■■□□ 2.61
MBD3-208ENST00000590830 TERF2IPQ9NYB0 399 aa31.34■■■□□ 2.61
MBD3-208ENST00000590830 UPF1Q92900 1129 aaKnown RBP eCLIP31.33■■■□□ 2.611e-10■■■■■ 33
MBD3-208ENST00000590830 SLIT3O75094 1523 aa31.33■■■□□ 2.61
MBD3-208ENST00000590830 ONECUT3O60422 494 aaPredicted RBP31.32■■■□□ 2.6
MBD3-208ENST00000590830 MON2Q7Z3U7 1717 aa31.32■■■□□ 2.6
MBD3-208ENST00000590830 NME9Q86XW9 330 aa31.31■■■□□ 2.6
MBD3-208ENST00000590830 SPATA31A5Q5VU36 1347 aa31.29■■■□□ 2.6
MBD3-208ENST00000590830 SPATA31A7Q8IWB4 1347 aa31.29■■■□□ 2.6
MBD3-208ENST00000590830 NINLQ9Y2I6 1382 aa31.29■■■□□ 2.6
MBD3-208ENST00000590830 CAMTA1Q9Y6Y1 1673 aa31.29■■■□□ 2.6
MBD3-208ENST00000590830 SEPT12Q8IYM1 358 aa31.28■■■□□ 2.6
MBD3-208ENST00000590830 STRN4Q9NRL3 753 aa31.28■■■□□ 2.6
MBD3-208ENST00000590830 USP31Q70CQ4 1352 aa31.28■■■□□ 2.6
MBD3-208ENST00000590830 EDC4Q6P2E9 1401 aaKnown RBP31.27■■■□□ 2.6
MBD3-208ENST00000590830 ZBTB7CA1YPR0 619 aa31.25■■■□□ 2.59
MBD3-208ENST00000590830 SOX12O15370 315 aa31.25■■■□□ 2.59
MBD3-208ENST00000590830 HSPA5P11021 654 aaKnown RBP31.25■■■□□ 2.59
MBD3-208ENST00000590830 FAM98CQ17RN3 349 aaKnown RBP31.24■■■□□ 2.59
MBD3-208ENST00000590830 ARHGEF25Q86VW2 580 aa31.24■■■□□ 2.59
MBD3-208ENST00000590830 KCNH5Q8NCM2 988 aa31.24■■■□□ 2.59
MBD3-208ENST00000590830 LMO7Q8WWI1 1683 aa31.24■■■□□ 2.59
MBD3-208ENST00000590830 EVA1CP58658 441 aa31.23■■■□□ 2.59
MBD3-208ENST00000590830 EIF4G2P78344 907 aaKnown RBP eCLIP31.23■■■□□ 2.59
MBD3-208ENST00000590830 CDCA8Q53HL2 280 aa31.23■■■□□ 2.59
MBD3-208ENST00000590830 AATKQ6ZMQ8 1374 aa31.22■■■□□ 2.59
MBD3-208ENST00000590830 LARP1Q6PKG0 1096 aaKnown RBP31.22■■■□□ 2.59
MBD3-208ENST00000590830 SPATA31A1Q5TZJ5 1347 aa31.22■■■□□ 2.59
MBD3-208ENST00000590830 ANKRD36BQ8N2N9 1353 aa31.21■■■□□ 2.59
MBD3-208ENST00000590830 AXIN2Q9Y2T1 843 aa31.21■■■□□ 2.59
MBD3-208ENST00000590830 NFAT5O94916 1531 aa31.18■■■□□ 2.58
MBD3-208ENST00000590830 COL5A2P05997 1499 aaPredicted RBP31.16■■■□□ 2.58
MBD3-208ENST00000590830 COL18A1P39060 1754 aa31.15■■■□□ 2.58
MBD3-208ENST00000590830 USP35Q9P2H5 1018 aa31.15■■■□□ 2.58
MBD3-208ENST00000590830 OVOS2A0A0J9YW53 1432 aa31.14■■■□□ 2.58
MBD3-208ENST00000590830 OVOS2Q6IE36 1432 aa31.14■■■□□ 2.58
MBD3-208ENST00000590830 USP54Q70EL1 1684 aa31.13■■■□□ 2.57
MBD3-208ENST00000590830 CARD14Q9BXL6 1004 aa31.13■■■□□ 2.57
MBD3-208ENST00000590830 BRWD3Q6RI45 1802 aa31.12■■■□□ 2.57
MBD3-208ENST00000590830 A0A0G2JS52 829 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms