RNA–Protein interactions for RNA: ENST00000590635.5

CTDP1-206, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 5

Gene CTDP1, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-206ENST00000590635 ZNF692Q9BU19 519 aaPredicted RBP17.18■□□□□ 0.34
CTDP1-206ENST00000590635 CABP1Q9NZU7 370 aa17.18■□□□□ 0.34
CTDP1-206ENST00000590635 ATAD2Q6PL18 1390 aa17.17■□□□□ 0.34
CTDP1-206ENST00000590635 CABLES1Q8TDN4 633 aa17.17■□□□□ 0.34
CTDP1-206ENST00000590635 PUS7Q96PZ0 661 aaKnown RBP17.16■□□□□ 0.34
CTDP1-206ENST00000590635 UNC5CLQ8IV45 518 aa17.15■□□□□ 0.34
CTDP1-206ENST00000590635 ABTB2Q8N961 1025 aa17.15■□□□□ 0.34
CTDP1-206ENST00000590635 CDK12Q9NYV4 1490 aaPredicted RBP17.14■□□□□ 0.33
CTDP1-206ENST00000590635 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
CTDP1-206ENST00000590635 NLRP13Q86W25 1043 aa17.13■□□□□ 0.33
CTDP1-206ENST00000590635 TRPM3Q9HCF6 1732 aaPredicted RBP17.13■□□□□ 0.33
CTDP1-206ENST00000590635 ST20-MTHFSA0A0A6YYL1 179 aa17.12■□□□□ 0.33
CTDP1-206ENST00000590635 TOPAZ1Q8N9V7 1692 aa17.12■□□□□ 0.33
CTDP1-206ENST00000590635 BCL9LQ86UU0 1499 aa17.12■□□□□ 0.33
CTDP1-206ENST00000590635 FAM83GA6ND36 823 aa17.11■□□□□ 0.33
CTDP1-206ENST00000590635 SLIT2O94813 1529 aa17.11■□□□□ 0.33
CTDP1-206ENST00000590635 GJD4Q96KN9 370 aaPredicted RBP17.1■□□□□ 0.33
CTDP1-206ENST00000590635 ATRNO75882 1429 aa17.1■□□□□ 0.33
CTDP1-206ENST00000590635 ALS2Q96Q42 1657 aa17.1■□□□□ 0.33
CTDP1-206ENST00000590635 USP6P35125 1406 aa17.09■□□□□ 0.33
CTDP1-206ENST00000590635 MARF1Q9Y4F3 1742 aaKnown RBP17.09■□□□□ 0.33
CTDP1-206ENST00000590635 VPS72Q15906 364 aa17.08■□□□□ 0.32
CTDP1-206ENST00000590635 TESK2Q96S53 571 aa17.08■□□□□ 0.32
CTDP1-206ENST00000590635 PRDM11Q9NQV5 511 aa17.08■□□□□ 0.32
CTDP1-206ENST00000590635 NLRP6P59044 892 aa17.07■□□□□ 0.32
CTDP1-206ENST00000590635 TMF1P82094 1093 aa17.07■□□□□ 0.32
CTDP1-206ENST00000590635 CDCA8Q53HL2 280 aa17.07■□□□□ 0.32
CTDP1-206ENST00000590635 NUTM2GQ5VZR2 741 aa17.07■□□□□ 0.32
CTDP1-206ENST00000590635 HDGFL2Q7Z4V5 671 aaPredicted RBP17.07■□□□□ 0.32
CTDP1-206ENST00000590635 TMC1Q8TDI8 760 aa17.07■□□□□ 0.32
CTDP1-206ENST00000590635 TERF2IPQ9NYB0 399 aa17.07■□□□□ 0.32
CTDP1-206ENST00000590635 USP47Q96K76 1375 aa17.06■□□□□ 0.32
CTDP1-206ENST00000590635 TTC21AQ8NDW8 1320 aa17.06■□□□□ 0.32
CTDP1-206ENST00000590635 BTG4Q9NY30 223 aa17.06■□□□□ 0.32
CTDP1-206ENST00000590635 CPSF1Q10570 1443 aaKnown RBP17.05■□□□□ 0.32
CTDP1-206ENST00000590635 NINLQ9Y2I6 1382 aa17.05■□□□□ 0.32
CTDP1-206ENST00000590635 KTN1Q86UP2 1357 aaKnown RBP17.04■□□□□ 0.32
CTDP1-206ENST00000590635 USP19O94966 1318 aa17.04■□□□□ 0.32
CTDP1-206ENST00000590635 TTC21BQ7Z4L5 1316 aa17.04■□□□□ 0.32
CTDP1-206ENST00000590635 GCP02774 474 aa17.04■□□□□ 0.32
CTDP1-206ENST00000590635 CCDC9Q9Y3X0 531 aaKnown RBP17.04■□□□□ 0.32
CTDP1-206ENST00000590635 SSH2Q76I76 1423 aa17.04■□□□□ 0.32
CTDP1-206ENST00000590635 ZC3H6P61129 1189 aaKnown RBP17.03■□□□□ 0.32
CTDP1-206ENST00000590635 KIAA0232Q92628 1395 aa17.02■□□□□ 0.32
CTDP1-206ENST00000590635 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.02■□□□□ 0.32
CTDP1-206ENST00000590635 KCNH5Q8NCM2 988 aa17.02■□□□□ 0.32
CTDP1-206ENST00000590635 SLC12A5Q9H2X9 1139 aa17.02■□□□□ 0.32
CTDP1-206ENST00000590635 RGS12O14924 1447 aa17.02■□□□□ 0.31
CTDP1-206ENST00000590635 CPDO75976 1380 aa17.02■□□□□ 0.31
CTDP1-206ENST00000590635 NWD2Q9ULI1 1742 aa17.01■□□□□ 0.31
CTDP1-206ENST00000590635 ABCA3Q99758 1704 aa17.01■□□□□ 0.31
CTDP1-206ENST00000590635 COL14A1Q05707 1796 aaKnown RBP17■□□□□ 0.31
CTDP1-206ENST00000590635 ONECUT3O60422 494 aaPredicted RBP17■□□□□ 0.31
CTDP1-206ENST00000590635 EVA1CP58658 441 aa17■□□□□ 0.31
CTDP1-206ENST00000590635 CHRNA2Q15822 529 aa16.98■□□□□ 0.31
CTDP1-206ENST00000590635 UPF1Q92900 1129 aaKnown RBP eCLIP16.98■□□□□ 0.31
CTDP1-206ENST00000590635 EIF4G2P78344 907 aaKnown RBP eCLIP16.97■□□□□ 0.31
CTDP1-206ENST00000590635 CRYBG1Q9Y4K1 1723 aa16.96■□□□□ 0.31
CTDP1-206ENST00000590635 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.96■□□□□ 0.31
CTDP1-206ENST00000590635 PLCH1Q4KWH8 1693 aa16.96■□□□□ 0.31
CTDP1-206ENST00000590635 EDC4Q6P2E9 1401 aaKnown RBP16.96■□□□□ 0.3
CTDP1-206ENST00000590635 SPATA31A5Q5VU36 1347 aa16.96■□□□□ 0.3
CTDP1-206ENST00000590635 SPATA31A7Q8IWB4 1347 aa16.96■□□□□ 0.3
CTDP1-206ENST00000590635 USP31Q70CQ4 1352 aa16.95■□□□□ 0.3
CTDP1-206ENST00000590635 SEPT12Q8IYM1 358 aa16.95■□□□□ 0.3
CTDP1-206ENST00000590635 STRN4Q9NRL3 753 aa16.95■□□□□ 0.3
CTDP1-206ENST00000590635 PHRF1Q9P1Y6 1649 aaKnown RBP16.95■□□□□ 0.3
CTDP1-206ENST00000590635 AKAP12Q02952 1782 aa16.94■□□□□ 0.3
CTDP1-206ENST00000590635 CD163L1Q9NR16 1453 aa16.94■□□□□ 0.3
CTDP1-206ENST00000590635 A0A1W2PP64 1363 aa16.94■□□□□ 0.3
CTDP1-206ENST00000590635 AATKQ6ZMQ8 1374 aa16.94■□□□□ 0.3
CTDP1-206ENST00000590635 CCDC125Q86Z20 511 aa16.94■□□□□ 0.3
CTDP1-206ENST00000590635 SLIT3O75094 1523 aa16.93■□□□□ 0.3
CTDP1-206ENST00000590635 A0A0G2JS52 829 aa16.93■□□□□ 0.3
CTDP1-206ENST00000590635 MYT1Q01538 1121 aa16.93■□□□□ 0.3
CTDP1-206ENST00000590635 ARHGEF25Q86VW2 580 aa16.93■□□□□ 0.3
CTDP1-206ENST00000590635 GLI3P10071 1580 aa16.93■□□□□ 0.3
CTDP1-206ENST00000590635 NRKQ7Z2Y5 1582 aa16.93■□□□□ 0.3
CTDP1-206ENST00000590635 ANKRD36BQ8N2N9 1353 aa16.92■□□□□ 0.3
CTDP1-206ENST00000590635 FAM98CQ17RN3 349 aaKnown RBP16.92■□□□□ 0.3
CTDP1-206ENST00000590635 THRAP3Q9Y2W1 955 aaKnown RBP16.92■□□□□ 0.3
CTDP1-206ENST00000590635 SPATA31A1Q5TZJ5 1347 aa16.92■□□□□ 0.3
CTDP1-206ENST00000590635 ZBTB7CA1YPR0 619 aa16.91■□□□□ 0.3
CTDP1-206ENST00000590635 KRT27Q7Z3Y8 459 aa16.91■□□□□ 0.3
CTDP1-206ENST00000590635 NME9Q86XW9 330 aa16.91■□□□□ 0.3
CTDP1-206ENST00000590635 PIK3C2AO00443 1686 aa16.91■□□□□ 0.3
CTDP1-206ENST00000590635 BARGINQ6ZT62 677 aa16.9■□□□□ 0.3
CTDP1-206ENST00000590635 MON2Q7Z3U7 1717 aa16.9■□□□□ 0.3
CTDP1-206ENST00000590635 NRAPQ86VF7 1730 aa16.9■□□□□ 0.3
CTDP1-206ENST00000590635 LARP1Q6PKG0 1096 aaKnown RBP16.89■□□□□ 0.29
CTDP1-206ENST00000590635 TCP11L2Q8N4U5 519 aa16.89■□□□□ 0.29
CTDP1-206ENST00000590635 COG3Q96JB2 828 aa16.89■□□□□ 0.29
CTDP1-206ENST00000590635 CAMTA1Q9Y6Y1 1673 aa16.88■□□□□ 0.29
CTDP1-206ENST00000590635 SOX12O15370 315 aa16.88■□□□□ 0.29
CTDP1-206ENST00000590635 HSPA5P11021 654 aaKnown RBP16.87■□□□□ 0.29
CTDP1-206ENST00000590635 USP35Q9P2H5 1018 aa16.87■□□□□ 0.29
CTDP1-206ENST00000590635 TOM1L2Q6ZVM7 507 aa16.86■□□□□ 0.29
CTDP1-206ENST00000590635 ZRANB1Q9UGI0 708 aa16.86■□□□□ 0.29
CTDP1-206ENST00000590635 COL5A2P05997 1499 aaPredicted RBP16.86■□□□□ 0.29
CTDP1-206ENST00000590635 AXIN2Q9Y2T1 843 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms