RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 HIRIP3Q9BW71 556 aaPredicted RBP23.28■■□□□ 1.32
GCDH-213ENST00000590627 BRWD3Q6RI45 1802 aa23.27■■□□□ 1.32
GCDH-213ENST00000590627 SRCAPQ6ZRS2 3230 aa23.27■■□□□ 1.32
GCDH-213ENST00000590627 WASLO00401 505 aaPredicted RBP23.27■■□□□ 1.32
GCDH-213ENST00000590627 ZRANB1Q9UGI0 708 aa23.27■■□□□ 1.32
GCDH-213ENST00000590627 MINK1Q8N4C8 1332 aaPredicted RBP23.27■■□□□ 1.32
GCDH-213ENST00000590627 ALS2Q96Q42 1657 aa23.26■■□□□ 1.31
GCDH-213ENST00000590627 ONECUT3O60422 494 aaPredicted RBP23.26■■□□□ 1.31
GCDH-213ENST00000590627 PRR36Q9H6K5 1346 aa23.26■■□□□ 1.31
GCDH-213ENST00000590627 BLMP54132 1417 aaPredicted RBP23.25■■□□□ 1.31
GCDH-213ENST00000590627 ST20-MTHFSA0A0A6YYL1 179 aa23.25■■□□□ 1.31
GCDH-213ENST00000590627 SEPT12Q8IYM1 358 aa23.24■■□□□ 1.31
GCDH-213ENST00000590627 FAM83GA6ND36 823 aa23.23■■□□□ 1.31
GCDH-213ENST00000590627 PLEKHG5O94827 1062 aa23.23■■□□□ 1.31
GCDH-213ENST00000590627 ARHGEF28Q8N1W1 1705 aaKnown RBP23.22■■□□□ 1.31
GCDH-213ENST00000590627 CCDC9Q9Y3X0 531 aaKnown RBP23.22■■□□□ 1.31
GCDH-213ENST00000590627 CENPJQ9HC77 1338 aaPredicted RBP23.22■■□□□ 1.31
GCDH-213ENST00000590627 SBNO2Q9Y2G9 1366 aa23.21■■□□□ 1.31
GCDH-213ENST00000590627 NRAPQ86VF7 1730 aa23.21■■□□□ 1.31
GCDH-213ENST00000590627 COL14A1Q05707 1796 aaKnown RBP23.2■■□□□ 1.3
GCDH-213ENST00000590627 ITSN1Q15811 1721 aa23.2■■□□□ 1.3
GCDH-213ENST00000590627 NGDNQ8NEJ9 315 aaKnown RBP23.2■■□□□ 1.3
GCDH-213ENST00000590627 TESK2Q96S53 571 aa23.2■■□□□ 1.3
GCDH-213ENST00000590627 SLC24A1O60721 1099 aa23.19■■□□□ 1.3
GCDH-213ENST00000590627 CRYBG1Q9Y4K1 1723 aa23.18■■□□□ 1.3
GCDH-213ENST00000590627 ATP7BP35670 1465 aa23.17■■□□□ 1.3
GCDH-213ENST00000590627 KRT27Q7Z3Y8 459 aa23.17■■□□□ 1.3
GCDH-213ENST00000590627 BTG4Q9NY30 223 aa23.17■■□□□ 1.3
GCDH-213ENST00000590627 ZNF316A6NFI3 1004 aaPredicted RBP23.16■■□□□ 1.3
GCDH-213ENST00000590627 SF3B2Q13435 895 aaKnown RBP23.16■■□□□ 1.3
GCDH-213ENST00000590627 NUDT16Q96DE0 195 aaKnown RBP23.14■■□□□ 1.29
GCDH-213ENST00000590627 PAK3O75914 559 aaPredicted RBP23.13■■□□□ 1.29
GCDH-213ENST00000590627 QRICH2Q9H0J4 1663 aa23.12■■□□□ 1.29
GCDH-213ENST00000590627 A0A0G2JS52 829 aa23.11■■□□□ 1.29
GCDH-213ENST00000590627 MYT1Q01538 1121 aa23.11■■□□□ 1.29
GCDH-213ENST00000590627 FAM98CQ17RN3 349 aaKnown RBP23.11■■□□□ 1.29
GCDH-213ENST00000590627 DEFB132Q7Z7B7 95 aa23.11■■□□□ 1.29
GCDH-213ENST00000590627 TMF1P82094 1093 aa23.1■■□□□ 1.29
GCDH-213ENST00000590627 CDK19Q9BWU1 502 aa23.1■■□□□ 1.29
GCDH-213ENST00000590627 TOPAZ1Q8N9V7 1692 aa23.09■■□□□ 1.29
GCDH-213ENST00000590627 SPATA31A5Q5VU36 1347 aa23.09■■□□□ 1.29
GCDH-213ENST00000590627 SPATA31A7Q8IWB4 1347 aa23.09■■□□□ 1.29
GCDH-213ENST00000590627 PRDM11Q9NQV5 511 aa23.09■■□□□ 1.29
GCDH-213ENST00000590627 POLR3AO14802 1390 aaPredicted RBP23.09■■□□□ 1.29
GCDH-213ENST00000590627 C11orf95C9JLR9 678 aaPredicted RBP23.08■■□□□ 1.29
GCDH-213ENST00000590627 PHRF1Q9P1Y6 1649 aaKnown RBP23.08■■□□□ 1.28
GCDH-213ENST00000590627 CCDC61Q9Y6R9 512 aa23.07■■□□□ 1.28
GCDH-213ENST00000590627 CDCA8Q53HL2 280 aa23.06■■□□□ 1.28
GCDH-213ENST00000590627 PUS7Q96PZ0 661 aaKnown RBP23.06■■□□□ 1.28
GCDH-213ENST00000590627 THSD7AQ9UPZ6 1657 aa23.06■■□□□ 1.28
GCDH-213ENST00000590627 EVC2Q86UK5 1308 aa23.06■■□□□ 1.28
GCDH-213ENST00000590627 PLEKHG3A1L390 1219 aa23.05■■□□□ 1.28
GCDH-213ENST00000590627 ACEP12821 1306 aa23.05■■□□□ 1.28
GCDH-213ENST00000590627 KIAA0232Q92628 1395 aa23.04■■□□□ 1.28
GCDH-213ENST00000590627 BAG6P46379 1132 aa23.04■■□□□ 1.28
GCDH-213ENST00000590627 KIF7Q2M1P5 1343 aa23.04■■□□□ 1.28
GCDH-213ENST00000590627 WASHC2AQ641Q2 1341 aa23.04■■□□□ 1.28
GCDH-213ENST00000590627 CCDC7Q96M83 1385 aa23.03■■□□□ 1.28
GCDH-213ENST00000590627 RGPD1P0DJD0 1748 aa23.02■■□□□ 1.28
GCDH-213ENST00000590627 SPATA31A1Q5TZJ5 1347 aa23.01■■□□□ 1.27
GCDH-213ENST00000590627 ZC3H6P61129 1189 aaKnown RBP22.99■■□□□ 1.27
GCDH-213ENST00000590627 CHRNA2Q15822 529 aa22.99■■□□□ 1.27
GCDH-213ENST00000590627 NRKQ7Z2Y5 1582 aa22.97■■□□□ 1.27
GCDH-213ENST00000590627 NUTM2GQ5VZR2 741 aa22.97■■□□□ 1.27
GCDH-213ENST00000590627 ABTB2Q8N961 1025 aa22.97■■□□□ 1.27
GCDH-213ENST00000590627 STRN4Q9NRL3 753 aa22.96■■□□□ 1.27
GCDH-213ENST00000590627 USP19O94966 1318 aa22.96■■□□□ 1.27
GCDH-213ENST00000590627 BRD4O60885 1362 aaPredicted RBP22.96■■□□□ 1.27
GCDH-213ENST00000590627 CPDO75976 1380 aa22.96■■□□□ 1.27
GCDH-213ENST00000590627 DISP2A7MBM2 1401 aa22.96■■□□□ 1.27
GCDH-213ENST00000590627 LRP5O75197 1615 aa22.95■■□□□ 1.26
GCDH-213ENST00000590627 SRPK2P78362 688 aaKnown RBP22.95■■□□□ 1.26
GCDH-213ENST00000590627 FAM182BQ5T319 152 aa22.95■■□□□ 1.26
GCDH-213ENST00000590627 PPIP5K1Q6PFW1 1433 aa22.95■■□□□ 1.26
GCDH-213ENST00000590627 SSH2Q76I76 1423 aa22.94■■□□□ 1.26
GCDH-213ENST00000590627 CABP2Q9NPB3 220 aa22.94■■□□□ 1.26
GCDH-213ENST00000590627 TNS1Q9HBL0 1735 aaKnown RBP22.94■■□□□ 1.26
GCDH-213ENST00000590627 BARGINQ6ZT62 677 aa22.93■■□□□ 1.26
GCDH-213ENST00000590627 NLRP13Q86W25 1043 aa22.93■■□□□ 1.26
GCDH-213ENST00000590627 LMO7Q8WWI1 1683 aa22.93■■□□□ 1.26
GCDH-213ENST00000590627 EVA1CP58658 441 aa22.92■■□□□ 1.26
GCDH-213ENST00000590627 EN1Q05925 392 aaPredicted RBP22.92■■□□□ 1.26
GCDH-213ENST00000590627 CAMTA1Q9Y6Y1 1673 aa22.92■■□□□ 1.26
GCDH-213ENST00000590627 FAM196AQ6ZSG2 479 aa22.91■■□□□ 1.26
GCDH-213ENST00000590627 NINLQ9Y2I6 1382 aa22.9■■□□□ 1.26
GCDH-213ENST00000590627 GCP02774 474 aa22.89■■□□□ 1.25
GCDH-213ENST00000590627 POLR3GLQ9BT43 218 aa22.89■■□□□ 1.25
GCDH-213ENST00000590627 PSDA5PKW4 1024 aaPredicted RBP22.88■■□□□ 1.25
GCDH-213ENST00000590627 USP35Q9P2H5 1018 aa22.88■■□□□ 1.25
GCDH-213ENST00000590627 LARP1Q6PKG0 1096 aaKnown RBP22.87■■□□□ 1.25
GCDH-213ENST00000590627 TCP11L2Q8N4U5 519 aa22.87■■□□□ 1.25
GCDH-213ENST00000590627 THRAP3Q9Y2W1 955 aaKnown RBP22.87■■□□□ 1.25
GCDH-213ENST00000590627 USP6P35125 1406 aa22.87■■□□□ 1.25
GCDH-213ENST00000590627 PDE3BQ13370 1112 aa22.86■■□□□ 1.25
GCDH-213ENST00000590627 TRIM37O94972 964 aa22.85■■□□□ 1.25
GCDH-213ENST00000590627 DDX10Q13206 875 aaKnown RBP22.85■■□□□ 1.25
GCDH-213ENST00000590627 CABP1Q9NZU7 370 aa22.85■■□□□ 1.25
GCDH-213ENST00000590627 PARD3Q8TEW0 1356 aa22.85■■□□□ 1.25
GCDH-213ENST00000590627 EZH2Q15910 746 aaKnown RBP22.84■■□□□ 1.25
GCDH-213ENST00000590627 CAMKK2Q96RR4 588 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms