RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 ANKARQ7Z5J8 1434 aa24.4■■□□□ 1.5
CTDP1-205ENST00000590599 CADPS2Q86UW7 1296 aa24.39■■□□□ 1.5
CTDP1-205ENST00000590599 EDC4Q6P2E9 1401 aaKnown RBP24.39■■□□□ 1.5
CTDP1-205ENST00000590599 RGPD8O14715 1765 aaPredicted RBP24.38■■□□□ 1.49
CTDP1-205ENST00000590599 PNISRQ8TF01 805 aaKnown RBP24.37■■□□□ 1.49
CTDP1-205ENST00000590599 PLEKHG3A1L390 1219 aa24.37■■□□□ 1.49
CTDP1-205ENST00000590599 MST1RQ04912 1400 aa24.36■■□□□ 1.49
CTDP1-205ENST00000590599 ILDR2Q71H61 639 aa24.36■■□□□ 1.49
CTDP1-205ENST00000590599 ZNF692Q9BU19 519 aaPredicted RBP24.36■■□□□ 1.49
CTDP1-205ENST00000590599 FYB1O15117 783 aa24.34■■□□□ 1.49
CTDP1-205ENST00000590599 BRINP3Q76B58 766 aa24.34■■□□□ 1.49
CTDP1-205ENST00000590599 DDX17Q92841 729 aaKnown RBP24.34■■□□□ 1.49
CTDP1-205ENST00000590599 COL16A1Q07092 1604 aaPredicted RBP24.34■■□□□ 1.49
CTDP1-205ENST00000590599 ACEP12821 1306 aa24.33■■□□□ 1.49
CTDP1-205ENST00000590599 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.33■■□□□ 1.49
CTDP1-205ENST00000590599 GGNBP2Q9H3C7 697 aa24.33■■□□□ 1.49
CTDP1-205ENST00000590599 DCCP43146 1447 aa24.33■■□□□ 1.48
CTDP1-205ENST00000590599 HNRNPUQ00839 825 aaKnown RBP eCLIP24.32■■□□□ 1.48
CTDP1-205ENST00000590599 NRKQ7Z2Y5 1582 aa24.32■■□□□ 1.48
CTDP1-205ENST00000590599 TNNT2P45379 298 aaPredicted RBP24.31■■□□□ 1.48
CTDP1-205ENST00000590599 USP6P35125 1406 aa24.29■■□□□ 1.48
CTDP1-205ENST00000590599 PMFBP1Q8TBY8 1022 aa24.29■■□□□ 1.48
CTDP1-205ENST00000590599 POLR3AO14802 1390 aaPredicted RBP24.28■■□□□ 1.48
CTDP1-205ENST00000590599 NGDNQ8NEJ9 315 aaKnown RBP24.28■■□□□ 1.48
CTDP1-205ENST00000590599 AHDC1Q5TGY3 1603 aaPredicted RBP24.27■■□□□ 1.48
CTDP1-205ENST00000590599 ORAI2Q96SN7 254 aa24.26■■□□□ 1.47
CTDP1-205ENST00000590599 NHSL1Q5SYE7 1610 aa24.26■■□□□ 1.47
CTDP1-205ENST00000590599 C1orf167Q5SNV9 1468 aa24.25■■□□□ 1.47
CTDP1-205ENST00000590599 NME9Q86XW9 330 aa24.24■■□□□ 1.47
CTDP1-205ENST00000590599 TTC21BQ7Z4L5 1316 aa24.24■■□□□ 1.47
CTDP1-205ENST00000590599 WDR43Q15061 677 aaKnown RBP eCLIP24.23■■□□□ 1.47
CTDP1-205ENST00000590599 PHF8Q9UPP1 1060 aa24.21■■□□□ 1.47
CTDP1-205ENST00000590599 SSH2Q76I76 1423 aa24.21■■□□□ 1.47
CTDP1-205ENST00000590599 MTHFSP49914 203 aa24.21■■□□□ 1.47
CTDP1-205ENST00000590599 COG3Q96JB2 828 aa24.21■■□□□ 1.47
CTDP1-205ENST00000590599 INSRP06213 1382 aa24.21■■□□□ 1.47
CTDP1-205ENST00000590599 CFAP53Q96M91 514 aa24.2■■□□□ 1.46
CTDP1-205ENST00000590599 TTC21AQ8NDW8 1320 aa24.2■■□□□ 1.46
CTDP1-205ENST00000590599 ESCO1Q5FWF5 840 aa24.19■■□□□ 1.46
CTDP1-205ENST00000590599 BLMP54132 1417 aaPredicted RBP24.17■■□□□ 1.46
CTDP1-205ENST00000590599 JCADQ9P266 1359 aa24.17■■□□□ 1.46
CTDP1-205ENST00000590599 ZBED9Q6R2W3 1325 aa24.16■■□□□ 1.46
CTDP1-205ENST00000590599 ZRANB1Q9UGI0 708 aa24.16■■□□□ 1.46
CTDP1-205ENST00000590599 SHPRHQ149N8 1683 aa24.16■■□□□ 1.46
CTDP1-205ENST00000590599 PHF23Q9BUL5 403 aaPredicted RBP24.16■■□□□ 1.46
CTDP1-205ENST00000590599 RGS17Q9UGC6 210 aaPredicted RBP24.16■■□□□ 1.46
CTDP1-205ENST00000590599 KIF1AQ12756 1690 aa24.16■■□□□ 1.46
CTDP1-205ENST00000590599 LRP6O75581 1613 aa24.16■■□□□ 1.46
CTDP1-205ENST00000590599 OVOS2A0A0J9YW53 1432 aa24.15■■□□□ 1.46
CTDP1-205ENST00000590599 OVOS2Q6IE36 1432 aa24.15■■□□□ 1.46
CTDP1-205ENST00000590599 ADAMTS8Q9UP79 889 aa24.14■■□□□ 1.46
CTDP1-205ENST00000590599 PIK3C2AO00443 1686 aa24.13■■□□□ 1.45
CTDP1-205ENST00000590599 MAP2P11137 1827 aaKnown RBP24.13■■□□□ 1.45
CTDP1-205ENST00000590599 AATKQ6ZMQ8 1374 aa24.13■■□□□ 1.45
CTDP1-205ENST00000590599 XPCQ01831 940 aaPredicted RBP24.12■■□□□ 1.45
CTDP1-205ENST00000590599 NUTM2BA6NNL0 878 aaPredicted RBP24.09■■□□□ 1.45
CTDP1-205ENST00000590599 NUTM2EB1AL46 878 aaPredicted RBP24.09■■□□□ 1.45
CTDP1-205ENST00000590599 PSME1Q06323 249 aa24.09■■□□□ 1.45
CTDP1-205ENST00000590599 NUTM2AQ8IVF1 878 aaPredicted RBP24.09■■□□□ 1.45
CTDP1-205ENST00000590599 COL3A1P02461 1466 aaPredicted RBP24.09■■□□□ 1.45
CTDP1-205ENST00000590599 USP31Q70CQ4 1352 aa24.09■■□□□ 1.45
CTDP1-205ENST00000590599 POLKQ9UBT6 870 aa24.08■■□□□ 1.45
CTDP1-205ENST00000590599 SMG6Q86US8 1419 aaKnown RBP24.08■■□□□ 1.45
CTDP1-205ENST00000590599 FOXO3O43524 673 aa24.08■■□□□ 1.44
CTDP1-205ENST00000590599 PAK3O75914 559 aaPredicted RBP24.08■■□□□ 1.44
CTDP1-205ENST00000590599 USP54Q70EL1 1684 aa24.07■■□□□ 1.44
CTDP1-205ENST00000590599 CDK12Q9NYV4 1490 aaPredicted RBP24.06■■□□□ 1.44
CTDP1-205ENST00000590599 PNPLA6Q8IY17 1366 aa24.06■■□□□ 1.44
CTDP1-205ENST00000590599 PPM1GO15355 546 aaPredicted RBP24.06■■□□□ 1.44
CTDP1-205ENST00000590599 FBLN1P23142 703 aa24.06■■□□□ 1.44
CTDP1-205ENST00000590599 SOS2Q07890 1332 aaPredicted RBP24.05■■□□□ 1.44
CTDP1-205ENST00000590599 SENP3-EIF4A1A0A087X0R7 540 aa24.04■■□□□ 1.44
CTDP1-205ENST00000590599 ABTB2Q8N961 1025 aa24.04■■□□□ 1.44
CTDP1-205ENST00000590599 LRRC59Q96AG4 307 aaKnown RBP24.04■■□□□ 1.44
CTDP1-205ENST00000590599 NUDCQ9Y266 331 aa24.04■■□□□ 1.44
CTDP1-205ENST00000590599 EMILIN1Q9Y6C2 1016 aa24.04■■□□□ 1.44
CTDP1-205ENST00000590599 MARF1Q9Y4F3 1742 aaKnown RBP24.04■■□□□ 1.44
CTDP1-205ENST00000590599 NLRP6P59044 892 aa24.03■■□□□ 1.44
CTDP1-205ENST00000590599 PXDNQ92626 1479 aa24.03■■□□□ 1.44
CTDP1-205ENST00000590599 POTEAQ6S8J7 498 aa24.03■■□□□ 1.44
CTDP1-205ENST00000590599 DIAPH1O60610 1272 aaKnown RBP24.02■■□□□ 1.44
CTDP1-205ENST00000590599 RRS1Q15050 365 aaKnown RBP24.02■■□□□ 1.44
CTDP1-205ENST00000590599 SPATA31A6Q5VVP1 1343 aa24.02■■□□□ 1.44
CTDP1-205ENST00000590599 TRPM3Q9HCF6 1732 aaPredicted RBP24.01■■□□□ 1.43
CTDP1-205ENST00000590599 CCDC146Q8IYE0 955 aa24.01■■□□□ 1.43
CTDP1-205ENST00000590599 U2AF1L5P0DN76 240 aaPredicted RBP23.99■■□□□ 1.43
CTDP1-205ENST00000590599 U2AF1Q01081 240 aaKnown RBP eCLIP23.99■■□□□ 1.43
CTDP1-205ENST00000590599 NUTM2GQ5VZR2 741 aa23.99■■□□□ 1.43
CTDP1-205ENST00000590599 U2SURPO15042 1029 aaKnown RBP23.98■■□□□ 1.43
CTDP1-205ENST00000590599 SOX12O15370 315 aa23.98■■□□□ 1.43
CTDP1-205ENST00000590599 MEX3CQ5U5Q3 659 aaKnown RBP23.98■■□□□ 1.43
CTDP1-205ENST00000590599 NPHP3Q7Z494 1330 aa23.98■■□□□ 1.43
CTDP1-205ENST00000590599 KRT28Q7Z3Y7 464 aa23.98■■□□□ 1.43
CTDP1-205ENST00000590599 SALL2Q9Y467 1007 aaPredicted RBP23.98■■□□□ 1.43
CTDP1-205ENST00000590599 PEAK1Q9H792 1746 aa23.96■■□□□ 1.43
CTDP1-205ENST00000590599 ADAMTS2O95450 1211 aa23.95■■□□□ 1.42
CTDP1-205ENST00000590599 PLEKHG5O94827 1062 aa23.94■■□□□ 1.42
CTDP1-205ENST00000590599 RUNDC1Q96C34 613 aa23.94■■□□□ 1.42
CTDP1-205ENST00000590599 SOCS7O14512 581 aa23.93■■□□□ 1.42
CTDP1-205ENST00000590599 COL22A1Q8NFW1 1626 aaPredicted RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms