RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 GPATCH8Q9UKJ3 1502 aaKnown RBP9.51□□□□□ -0.89
NEDD4L-229ENST00000590506 NOLC1Q14978 699 aaKnown RBP eCLIP9.5□□□□□ -0.89
NEDD4L-229ENST00000590506 FTSJ3Q8IY81 847 aaKnown RBP9.5□□□□□ -0.89
NEDD4L-229ENST00000590506 TMEM63CQ9P1W3 806 aa9.5□□□□□ -0.89
NEDD4L-229ENST00000590506 ARHGAP31Q2M1Z3 1444 aa9.5□□□□□ -0.89
NEDD4L-229ENST00000590506 CHAMP1Q96JM3 812 aa9.5□□□□□ -0.89
NEDD4L-229ENST00000590506 CHMP4AQ9BY43 222 aa9.5□□□□□ -0.89
NEDD4L-229ENST00000590506 NSFL1CQ9UNZ2 370 aaKnown RBP9.5□□□□□ -0.89
NEDD4L-229ENST00000590506 PIK3C2GO75747 1445 aa9.49□□□□□ -0.89
NEDD4L-229ENST00000590506 TSPY4P0CV99 314 aa9.49□□□□□ -0.89
NEDD4L-229ENST00000590506 TSPY10P0CW01 314 aa9.49□□□□□ -0.89
NEDD4L-229ENST00000590506 RSPH4AQ5TD94 716 aa9.49□□□□□ -0.89
NEDD4L-229ENST00000590506 TROQ12816 1431 aaPredicted RBP9.49□□□□□ -0.89
NEDD4L-229ENST00000590506 SLC4A2P04920 1241 aa9.49□□□□□ -0.89
NEDD4L-229ENST00000590506 PIBF1Q8WXW3 757 aa9.49□□□□□ -0.89
NEDD4L-229ENST00000590506 KIF16BQ96L93 1317 aa9.49□□□□□ -0.89
NEDD4L-229ENST00000590506 SHROOM2Q13796 1616 aa9.49□□□□□ -0.89
NEDD4L-229ENST00000590506 GPRASP1Q5JY77 1395 aa9.48□□□□□ -0.89
NEDD4L-229ENST00000590506 IFNLR1Q8IU57 520 aaPredicted RBP9.48□□□□□ -0.89
NEDD4L-229ENST00000590506 LNPKQ9C0E8 428 aa9.48□□□□□ -0.89
NEDD4L-229ENST00000590506 PRDM15P57071 1507 aaPredicted RBP9.48□□□□□ -0.89
NEDD4L-229ENST00000590506 WDR7Q9Y4E6 1490 aa9.48□□□□□ -0.89
NEDD4L-229ENST00000590506 TTC12Q9H892 705 aaPredicted RBP9.48□□□□□ -0.89
NEDD4L-229ENST00000590506 C9orf84Q5VXU9 1444 aa9.48□□□□□ -0.89
NEDD4L-229ENST00000590506 NUCB2P80303 420 aa9.47□□□□□ -0.89
NEDD4L-229ENST00000590506 DZIP1LQ8IYY4 767 aaKnown RBP9.47□□□□□ -0.89
NEDD4L-229ENST00000590506 HDAC1Q13547 482 aaPredicted RBP9.47□□□□□ -0.89
NEDD4L-229ENST00000590506 FOXD4L5Q5VV16 416 aaPredicted RBP9.47□□□□□ -0.89
NEDD4L-229ENST00000590506 FOXD4L4Q8WXT5 416 aaPredicted RBP9.47□□□□□ -0.89
NEDD4L-229ENST00000590506 CROCC2H7BZ55 1655 aa9.46□□□□□ -0.89
NEDD4L-229ENST00000590506 EIF4G3O43432 1585 aaKnown RBP9.46□□□□□ -0.89
NEDD4L-229ENST00000590506 RIOK3O14730 519 aaKnown RBP9.46□□□□□ -0.89
NEDD4L-229ENST00000590506 CYP2E1P05181 493 aaPredicted RBP9.46□□□□□ -0.89
NEDD4L-229ENST00000590506 ZKSCAN2Q63HK3 967 aa9.46□□□□□ -0.89
NEDD4L-229ENST00000590506 CERS3Q8IU89 383 aa9.46□□□□□ -0.89
NEDD4L-229ENST00000590506 ANKRD7Q92527 254 aa9.46□□□□□ -0.89
NEDD4L-229ENST00000590506 ITSN2Q9NZM3 1697 aa9.46□□□□□ -0.9
NEDD4L-229ENST00000590506 ASXL1Q8IXJ9 1541 aa9.46□□□□□ -0.9
NEDD4L-229ENST00000590506 FKBP5Q13451 457 aaPredicted RBP9.46□□□□□ -0.9
NEDD4L-229ENST00000590506 ITPRIPQ8IWB1 547 aa9.46□□□□□ -0.9
NEDD4L-229ENST00000590506 PIAS4Q8N2W9 510 aaPredicted RBP9.46□□□□□ -0.9
NEDD4L-229ENST00000590506 TSPY26PQ9H489 355 aa9.46□□□□□ -0.9
NEDD4L-229ENST00000590506 OGFRQ9NZT2 677 aa9.46□□□□□ -0.9
NEDD4L-229ENST00000590506 FBXO3Q9UK99 471 aa9.46□□□□□ -0.9
NEDD4L-229ENST00000590506 NGEFQ8N5V2 710 aa9.45□□□□□ -0.9
NEDD4L-229ENST00000590506 SLFN14P0C7P3 912 aa9.45□□□□□ -0.9
NEDD4L-229ENST00000590506 TBC1D9Q6ZT07 1266 aa9.45□□□□□ -0.9
NEDD4L-229ENST00000590506 RAPGEF6Q8TEU7 1601 aa9.45□□□□□ -0.9
NEDD4L-229ENST00000590506 ZFP91Q96JP5 570 aaPredicted RBP9.44□□□□□ -0.9
NEDD4L-229ENST00000590506 FEZ1Q99689 392 aa9.44□□□□□ -0.9
NEDD4L-229ENST00000590506 PTPRGP23470 1445 aa9.44□□□□□ -0.9
NEDD4L-229ENST00000590506 PDS5BQ9NTI5 1447 aa9.44□□□□□ -0.9
NEDD4L-229ENST00000590506 ATXN8OSP0DMR3 200 aa9.44□□□□□ -0.9
NEDD4L-229ENST00000590506 HNRNPMP52272 730 aaKnown RBP eCLIP9.44□□□□□ -0.97e-8■■□□□ 12.6
NEDD4L-229ENST00000590506 NUCB1Q02818 461 aa9.44□□□□□ -0.9
NEDD4L-229ENST00000590506 GABPB1Q06547 395 aaPredicted RBP9.44□□□□□ -0.9
NEDD4L-229ENST00000590506 ZGPATQ8N5A5 531 aaKnown RBP9.44□□□□□ -0.9
NEDD4L-229ENST00000590506 DNAJC2Q99543 621 aaKnown RBP9.44□□□□□ -0.9
NEDD4L-229ENST00000590506 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.44□□□□□ -0.97e-22■□□□□ 11.1
NEDD4L-229ENST00000590506 A2MP01023 1474 aa9.44□□□□□ -0.9
NEDD4L-229ENST00000590506 SPTLC3Q9NUV7 552 aa9.43□□□□□ -0.9
NEDD4L-229ENST00000590506 USP25Q9UHP3 1055 aa9.43□□□□□ -0.9
NEDD4L-229ENST00000590506 ZDHHC9Q9Y397 364 aa9.43□□□□□ -0.9
NEDD4L-229ENST00000590506 GRIN2AQ12879 1464 aa9.43□□□□□ -0.9
NEDD4L-229ENST00000590506 LAMC1P11047 1609 aa9.43□□□□□ -0.9
NEDD4L-229ENST00000590506 BMP2KLQ5H9B9 411 aa9.43□□□□□ -0.9
NEDD4L-229ENST00000590506 CHD1LQ86WJ1 897 aa9.43□□□□□ -0.9
NEDD4L-229ENST00000590506 TIGD1Q96MW7 591 aa9.43□□□□□ -0.9
NEDD4L-229ENST00000590506 DISP1Q96F81 1524 aa9.43□□□□□ -0.9
NEDD4L-229ENST00000590506 CCDC66A2RUB6 948 aa9.42□□□□□ -0.9
NEDD4L-229ENST00000590506 IRX3P78415 501 aaPredicted RBP9.42□□□□□ -0.9
NEDD4L-229ENST00000590506 AEBP1Q8IUX7 1158 aa9.42□□□□□ -0.9
NEDD4L-229ENST00000590506 TCP11L2Q8N4U5 519 aa9.42□□□□□ -0.9
NEDD4L-229ENST00000590506 DIAPH3Q9NSV4 1193 aa9.42□□□□□ -0.9
NEDD4L-229ENST00000590506 KIAA0556O60303 1618 aa9.42□□□□□ -0.9
NEDD4L-229ENST00000590506 TRIM27P14373 513 aa9.42□□□□□ -0.9
NEDD4L-229ENST00000590506 CHAF1AQ13111 956 aaPredicted RBP9.42□□□□□ -0.9
NEDD4L-229ENST00000590506 ABCC10Q5T3U5 1492 aa9.42□□□□□ -0.9
NEDD4L-229ENST00000590506 SHANK2Q9UPX8 1470 aa9.42□□□□□ -0.9
NEDD4L-229ENST00000590506 ERICH4A6NGS2 130 aa9.41□□□□□ -0.9
NEDD4L-229ENST00000590506 ADCY5O95622 1261 aa9.41□□□□□ -0.9
NEDD4L-229ENST00000590506 CAPN2P17655 700 aa9.41□□□□□ -0.9
NEDD4L-229ENST00000590506 CDCA8Q53HL2 280 aa9.41□□□□□ -0.9
NEDD4L-229ENST00000590506 TRERF1Q96PN7 1200 aa9.41□□□□□ -0.9
NEDD4L-229ENST00000590506 DDX19BQ9UMR2 479 aa9.41□□□□□ -0.9
NEDD4L-229ENST00000590506 TRIM6-TRIM34B2RNG4 842 aa9.41□□□□□ -0.9
NEDD4L-229ENST00000590506 TRIM34Q9BYJ4 488 aa9.41□□□□□ -0.9
NEDD4L-229ENST00000590506 DNAJC5Q9H3Z4 198 aa9.41□□□□□ -0.9
NEDD4L-229ENST00000590506 SMC4Q9NTJ3 1288 aa9.41□□□□□ -0.9
NEDD4L-229ENST00000590506 CTNNA3Q9UI47 895 aa9.41□□□□□ -0.9
NEDD4L-229ENST00000590506 CTIFO43310 598 aaKnown RBP9.4□□□□□ -0.9
NEDD4L-229ENST00000590506 VASPP50552 380 aaPredicted RBP9.4□□□□□ -0.9
NEDD4L-229ENST00000590506 NCBP1Q09161 790 aaKnown RBP9.4□□□□□ -0.9
NEDD4L-229ENST00000590506 RABEP1Q15276 862 aa9.4□□□□□ -0.9
NEDD4L-229ENST00000590506 ANKRD45Q5TZF3 282 aa9.4□□□□□ -0.9
NEDD4L-229ENST00000590506 TMEM57Q8N5G2 664 aa9.4□□□□□ -0.9
NEDD4L-229ENST00000590506 ZBTB9Q96C00 473 aa9.4□□□□□ -0.9
NEDD4L-229ENST00000590506 ADCY10Q96PN6 1610 aa9.4□□□□□ -0.9
NEDD4L-229ENST00000590506 ADAMTS12P58397 1594 aa9.4□□□□□ -0.9
NEDD4L-229ENST00000590506 PLEKHD1A6NEE1 506 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms