RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 CABP1Q9NZU7 370 aa30.46■■■□□ 2.47
LRP3-202ENST00000590275 RBM6P78332 1123 aaKnown RBP30.45■■■□□ 2.47
LRP3-202ENST00000590275 RGS12O14924 1447 aa30.45■■■□□ 2.46
LRP3-202ENST00000590275 EVC2Q86UK5 1308 aa30.44■■■□□ 2.46
LRP3-202ENST00000590275 FAM83GA6ND36 823 aa30.43■■■□□ 2.46
LRP3-202ENST00000590275 CDK12Q9NYV4 1490 aaPredicted RBP30.43■■■□□ 2.46
LRP3-202ENST00000590275 NUTM2GQ5VZR2 741 aa30.42■■■□□ 2.46
LRP3-202ENST00000590275 TRPC5Q9UL62 973 aaPredicted RBP30.42■■■□□ 2.46
LRP3-202ENST00000590275 CRYBG1Q9Y4K1 1723 aa30.42■■■□□ 2.46
LRP3-202ENST00000590275 HAP1P54257 671 aaPredicted RBP30.41■■■□□ 2.46
LRP3-202ENST00000590275 SBNO2Q9Y2G9 1366 aa30.39■■■□□ 2.45
LRP3-202ENST00000590275 UNC5CLQ8IV45 518 aa30.38■■■□□ 2.45
LRP3-202ENST00000590275 SSH2Q76I76 1423 aa30.35■■■□□ 2.45
LRP3-202ENST00000590275 USP6P35125 1406 aa30.34■■■□□ 2.45
LRP3-202ENST00000590275 TESK2Q96S53 571 aa30.34■■■□□ 2.45
LRP3-202ENST00000590275 CLSPNQ9HAW4 1339 aa30.33■■■□□ 2.45
LRP3-202ENST00000590275 GJD4Q96KN9 370 aaPredicted RBP30.33■■■□□ 2.45
LRP3-202ENST00000590275 PLCH1Q4KWH8 1693 aa30.32■■■□□ 2.44
LRP3-202ENST00000590275 GLI3P10071 1580 aa30.32■■■□□ 2.44
LRP3-202ENST00000590275 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.31■■■□□ 2.44
LRP3-202ENST00000590275 ST20-MTHFSA0A0A6YYL1 179 aa30.31■■■□□ 2.44
LRP3-202ENST00000590275 ABTB2Q8N961 1025 aa30.31■■■□□ 2.44
LRP3-202ENST00000590275 USP19O94966 1318 aa30.29■■■□□ 2.44
LRP3-202ENST00000590275 PHRF1Q9P1Y6 1649 aaKnown RBP30.29■■■□□ 2.44
LRP3-202ENST00000590275 KIAA0232Q92628 1395 aa30.28■■■□□ 2.44
LRP3-202ENST00000590275 CPSF1Q10570 1443 aaKnown RBP30.28■■■□□ 2.44
LRP3-202ENST00000590275 ATAD2Q6PL18 1390 aa30.28■■■□□ 2.44
LRP3-202ENST00000590275 VPS72Q15906 364 aa30.27■■■□□ 2.44
LRP3-202ENST00000590275 UPF1Q92900 1129 aaKnown RBP eCLIP30.27■■■□□ 2.44
LRP3-202ENST00000590275 BTG4Q9NY30 223 aa30.27■■■□□ 2.44
LRP3-202ENST00000590275 ZC3H6P61129 1189 aaKnown RBP30.26■■■□□ 2.43
LRP3-202ENST00000590275 CHRNA2Q15822 529 aa30.26■■■□□ 2.43
LRP3-202ENST00000590275 CD163L1Q9NR16 1453 aa30.25■■■□□ 2.43
LRP3-202ENST00000590275 NRAPQ86VF7 1730 aa30.25■■■□□ 2.43
LRP3-202ENST00000590275 NWD2Q9ULI1 1742 aa30.24■■■□□ 2.43
LRP3-202ENST00000590275 NRKQ7Z2Y5 1582 aa30.24■■■□□ 2.43
LRP3-202ENST00000590275 PRDM11Q9NQV5 511 aa30.23■■■□□ 2.43
LRP3-202ENST00000590275 TIMELESSQ9UNS1 1208 aa30.23■■■□□ 2.43
LRP3-202ENST00000590275 COL14A1Q05707 1796 aaKnown RBP30.23■■■□□ 2.43
LRP3-202ENST00000590275 CCER1Q8TC90 406 aaPredicted RBP30.22■■■□□ 2.43
LRP3-202ENST00000590275 SLC12A5Q9H2X9 1139 aa30.22■■■□□ 2.43
LRP3-202ENST00000590275 BRD4O60885 1362 aaPredicted RBP30.22■■■□□ 2.43
LRP3-202ENST00000590275 TTC21BQ7Z4L5 1316 aa30.22■■■□□ 2.43
LRP3-202ENST00000590275 USP47Q96K76 1375 aa30.21■■■□□ 2.43
LRP3-202ENST00000590275 PIK3C2AO00443 1686 aa30.2■■■□□ 2.42
LRP3-202ENST00000590275 GCP02774 474 aa30.19■■■□□ 2.42
LRP3-202ENST00000590275 NLRP13Q86W25 1043 aa30.19■■■□□ 2.42
LRP3-202ENST00000590275 AKAP12Q02952 1782 aa30.18■■■□□ 2.42
LRP3-202ENST00000590275 ZNF692Q9BU19 519 aaPredicted RBP30.18■■■□□ 2.42
LRP3-202ENST00000590275 NLRP6P59044 892 aa30.17■■■□□ 2.42
LRP3-202ENST00000590275 ZRANB1Q9UGI0 708 aa30.16■■■□□ 2.42
LRP3-202ENST00000590275 SLIT3O75094 1523 aa30.16■■■□□ 2.42
LRP3-202ENST00000590275 CPDO75976 1380 aa30.15■■■□□ 2.42
LRP3-202ENST00000590275 KTN1Q86UP2 1357 aaKnown RBP30.15■■■□□ 2.42
LRP3-202ENST00000590275 ONECUT3O60422 494 aaPredicted RBP30.15■■■□□ 2.42
LRP3-202ENST00000590275 TMC1Q8TDI8 760 aa30.15■■■□□ 2.42
LRP3-202ENST00000590275 CCDC9Q9Y3X0 531 aaKnown RBP30.15■■■□□ 2.42
LRP3-202ENST00000590275 EP400Q96L91 3159 aa30.14■■■□□ 2.42
LRP3-202ENST00000590275 PUS7Q96PZ0 661 aaKnown RBP30.13■■■□□ 2.41
LRP3-202ENST00000590275 CAMTA1Q9Y6Y1 1673 aa30.13■■■□□ 2.41
LRP3-202ENST00000590275 SEPT12Q8IYM1 358 aa30.12■■■□□ 2.41
LRP3-202ENST00000590275 SPATA31A5Q5VU36 1347 aa30.12■■■□□ 2.41
LRP3-202ENST00000590275 SPATA31A7Q8IWB4 1347 aa30.12■■■□□ 2.41
LRP3-202ENST00000590275 LMO7Q8WWI1 1683 aa30.11■■■□□ 2.41
LRP3-202ENST00000590275 A0A1W2PP64 1363 aa30.1■■■□□ 2.41
LRP3-202ENST00000590275 MON2Q7Z3U7 1717 aa30.1■■■□□ 2.41
LRP3-202ENST00000590275 FAM98CQ17RN3 349 aaKnown RBP30.09■■■□□ 2.41
LRP3-202ENST00000590275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.09■■■□□ 2.41
LRP3-202ENST00000590275 TTC21AQ8NDW8 1320 aa30.09■■■□□ 2.41
LRP3-202ENST00000590275 NME9Q86XW9 330 aa30.08■■■□□ 2.41
LRP3-202ENST00000590275 STRN4Q9NRL3 753 aa30.08■■■□□ 2.41
LRP3-202ENST00000590275 SPATA31A1Q5TZJ5 1347 aa30.05■■■□□ 2.4
LRP3-202ENST00000590275 LARP1Q6PKG0 1096 aaKnown RBP30.04■■■□□ 2.4
LRP3-202ENST00000590275 BRWD3Q6RI45 1802 aa30.03■■■□□ 2.4
LRP3-202ENST00000590275 SOX12O15370 315 aa30.03■■■□□ 2.4
LRP3-202ENST00000590275 AXIN2Q9Y2T1 843 aa30.03■■■□□ 2.4
LRP3-202ENST00000590275 USP31Q70CQ4 1352 aa30.03■■■□□ 2.4
LRP3-202ENST00000590275 ZBTB7CA1YPR0 619 aa30.02■■■□□ 2.4
LRP3-202ENST00000590275 HDGFL2Q7Z4V5 671 aaPredicted RBP30.02■■■□□ 2.4
LRP3-202ENST00000590275 NFAT5O94916 1531 aa30.01■■■□□ 2.4
LRP3-202ENST00000590275 TMF1P82094 1093 aa30.01■■■□□ 2.39
LRP3-202ENST00000590275 ARHGEF25Q86VW2 580 aa30.01■■■□□ 2.39
LRP3-202ENST00000590275 EDC4Q6P2E9 1401 aaKnown RBP30.01■■■□□ 2.39
LRP3-202ENST00000590275 COL5A2P05997 1499 aaPredicted RBP30■■■□□ 2.39
LRP3-202ENST00000590275 AATKQ6ZMQ8 1374 aa30■■■□□ 2.39
LRP3-202ENST00000590275 TERF2IPQ9NYB0 399 aa29.99■■■□□ 2.39
LRP3-202ENST00000590275 COL18A1P39060 1754 aa29.99■■■□□ 2.39
LRP3-202ENST00000590275 THSD7AQ9UPZ6 1657 aa29.98■■■□□ 2.39
LRP3-202ENST00000590275 EVA1CP58658 441 aa29.97■■■□□ 2.39
LRP3-202ENST00000590275 USP35Q9P2H5 1018 aa29.97■■■□□ 2.39
LRP3-202ENST00000590275 NINLQ9Y2I6 1382 aa29.96■■■□□ 2.39
LRP3-202ENST00000590275 KRT27Q7Z3Y8 459 aa29.96■■■□□ 2.39
LRP3-202ENST00000590275 SLC24A1O60721 1099 aa29.95■■■□□ 2.39
LRP3-202ENST00000590275 FAM182BQ5T319 152 aa29.95■■■□□ 2.39
LRP3-202ENST00000590275 A0A0G2JS52 829 aa29.94■■■□□ 2.38
LRP3-202ENST00000590275 MYT1Q01538 1121 aa29.94■■■□□ 2.38
LRP3-202ENST00000590275 KCNH5Q8NCM2 988 aa29.94■■■□□ 2.38
LRP3-202ENST00000590275 OVOS2A0A0J9YW53 1432 aa29.94■■■□□ 2.38
LRP3-202ENST00000590275 OVOS2Q6IE36 1432 aa29.94■■■□□ 2.38
LRP3-202ENST00000590275 USP54Q70EL1 1684 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms