RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 SEPT12Q8IYM1 358 aa26.1■■□□□ 1.77
H3F3B-209ENST00000589949 ITSN1Q15811 1721 aa26.1■■□□□ 1.77
H3F3B-209ENST00000589949 NRAPQ86VF7 1730 aa26.1■■□□□ 1.77
H3F3B-209ENST00000589949 TOPAZ1Q8N9V7 1692 aa26.09■■□□□ 1.77
H3F3B-209ENST00000589949 BTG4Q9NY30 223 aa26.08■■□□□ 1.77
H3F3B-209ENST00000589949 POLR3AO14802 1390 aaPredicted RBP26.07■■□□□ 1.76
H3F3B-209ENST00000589949 CCDC9Q9Y3X0 531 aaKnown RBP26.07■■□□□ 1.76
H3F3B-209ENST00000589949 CCDC61Q9Y6R9 512 aa26.07■■□□□ 1.76
H3F3B-209ENST00000589949 ACEP12821 1306 aa26.07■■□□□ 1.76
H3F3B-209ENST00000589949 COL14A1Q05707 1796 aaKnown RBP26.05■■□□□ 1.76
H3F3B-209ENST00000589949 PLEKHG3A1L390 1219 aa26.05■■□□□ 1.76
H3F3B-209ENST00000589949 NBPF8Q3BBV2 869 aa26.05■■□□□ 1.76
H3F3B-209ENST00000589949 NUTM2GQ5VZR2 741 aa26.05■■□□□ 1.76
H3F3B-209ENST00000589949 CENPJQ9HC77 1338 aaPredicted RBP26.04■■□□□ 1.76
H3F3B-209ENST00000589949 CCDC125Q86Z20 511 aa26.02■■□□□ 1.76
H3F3B-209ENST00000589949 CABP2Q9NPB3 220 aa26.02■■□□□ 1.76
H3F3B-209ENST00000589949 KIAA0232Q92628 1395 aa26■■□□□ 1.75
H3F3B-209ENST00000589949 NEUROD1Q13562 356 aa26■■□□□ 1.75
H3F3B-209ENST00000589949 FAM98CQ17RN3 349 aaKnown RBP26■■□□□ 1.75
H3F3B-209ENST00000589949 PHRF1Q9P1Y6 1649 aaKnown RBP25.99■■□□□ 1.75
H3F3B-209ENST00000589949 SRPK2P78362 688 aaKnown RBP25.99■■□□□ 1.75
H3F3B-209ENST00000589949 CHRNA2Q15822 529 aa25.99■■□□□ 1.75
H3F3B-209ENST00000589949 PRDM11Q9NQV5 511 aa25.99■■□□□ 1.75
H3F3B-209ENST00000589949 QRICH2Q9H0J4 1663 aa25.99■■□□□ 1.75
H3F3B-209ENST00000589949 KRT27Q7Z3Y8 459 aa25.98■■□□□ 1.75
H3F3B-209ENST00000589949 BLMP54132 1417 aaPredicted RBP25.97■■□□□ 1.75
H3F3B-209ENST00000589949 PPIP5K1Q6PFW1 1433 aa25.97■■□□□ 1.75
H3F3B-209ENST00000589949 SPATA31A5Q5VU36 1347 aa25.97■■□□□ 1.75
H3F3B-209ENST00000589949 SPATA31A7Q8IWB4 1347 aa25.97■■□□□ 1.75
H3F3B-209ENST00000589949 TRPM1Q7Z4N2 1603 aa25.97■■□□□ 1.75
H3F3B-209ENST00000589949 SRCAPQ6ZRS2 3230 aa25.97■■□□□ 1.75
H3F3B-209ENST00000589949 ZC3H6P61129 1189 aaKnown RBP25.96■■□□□ 1.75
H3F3B-209ENST00000589949 DEFB132Q7Z7B7 95 aa25.95■■□□□ 1.74
H3F3B-209ENST00000589949 A0A0G2JS52 829 aa25.93■■□□□ 1.74
H3F3B-209ENST00000589949 MYT1Q01538 1121 aa25.93■■□□□ 1.74
H3F3B-209ENST00000589949 ABTB2Q8N961 1025 aa25.93■■□□□ 1.74
H3F3B-209ENST00000589949 NRKQ7Z2Y5 1582 aa25.92■■□□□ 1.74
H3F3B-209ENST00000589949 CABP1Q9NZU7 370 aa25.92■■□□□ 1.74
H3F3B-209ENST00000589949 USP19O94966 1318 aa25.91■■□□□ 1.74
H3F3B-209ENST00000589949 FAM182BQ5T319 152 aa25.91■■□□□ 1.74
H3F3B-209ENST00000589949 THSD7AQ9UPZ6 1657 aa25.9■■□□□ 1.74
H3F3B-209ENST00000589949 SPATA31A1Q5TZJ5 1347 aa25.89■■□□□ 1.74
H3F3B-209ENST00000589949 STRN4Q9NRL3 753 aa25.89■■□□□ 1.74
H3F3B-209ENST00000589949 ZRANB1Q9UGI0 708 aa25.89■■□□□ 1.74
H3F3B-209ENST00000589949 ROCK2O75116 1388 aaKnown RBP25.88■■□□□ 1.73
H3F3B-209ENST00000589949 CAMTA1Q9Y6Y1 1673 aa25.87■■□□□ 1.73
H3F3B-209ENST00000589949 USP6P35125 1406 aa25.87■■□□□ 1.73
H3F3B-209ENST00000589949 CPDO75976 1380 aa25.85■■□□□ 1.73
H3F3B-209ENST00000589949 SSH2Q76I76 1423 aa25.85■■□□□ 1.73
H3F3B-209ENST00000589949 LMO7Q8WWI1 1683 aa25.84■■□□□ 1.73
H3F3B-209ENST00000589949 GCP02774 474 aa25.84■■□□□ 1.73
H3F3B-209ENST00000589949 EVC2Q86UK5 1308 aa25.84■■□□□ 1.73
H3F3B-209ENST00000589949 NLRP13Q86W25 1043 aa25.83■■□□□ 1.73
H3F3B-209ENST00000589949 LARP1Q6PKG0 1096 aaKnown RBP25.82■■□□□ 1.72
H3F3B-209ENST00000589949 USP35Q9P2H5 1018 aa25.82■■□□□ 1.72
H3F3B-209ENST00000589949 SF3B2Q13435 895 aaKnown RBP25.81■■□□□ 1.72
H3F3B-209ENST00000589949 BRD4O60885 1362 aaPredicted RBP25.81■■□□□ 1.72
H3F3B-209ENST00000589949 PIK3C2AO00443 1686 aa25.78■■□□□ 1.72
H3F3B-209ENST00000589949 EVA1CP58658 441 aa25.78■■□□□ 1.72
H3F3B-209ENST00000589949 NLRP6P59044 892 aa25.78■■□□□ 1.72
H3F3B-209ENST00000589949 SLIT3O75094 1523 aa25.77■■□□□ 1.72
H3F3B-209ENST00000589949 COL5A2P05997 1499 aaPredicted RBP25.75■■□□□ 1.71
H3F3B-209ENST00000589949 BARGINQ6ZT62 677 aa25.75■■□□□ 1.71
H3F3B-209ENST00000589949 CPSF1Q10570 1443 aaKnown RBP25.73■■□□□ 1.71
H3F3B-209ENST00000589949 TTC21BQ7Z4L5 1316 aa25.73■■□□□ 1.71
H3F3B-209ENST00000589949 BAG6P46379 1132 aa25.73■■□□□ 1.71
H3F3B-209ENST00000589949 EN1Q05925 392 aaPredicted RBP25.73■■□□□ 1.71
H3F3B-209ENST00000589949 ZBTB7CA1YPR0 619 aa25.72■■□□□ 1.71
H3F3B-209ENST00000589949 TCP11L2Q8N4U5 519 aa25.72■■□□□ 1.71
H3F3B-209ENST00000589949 AKAP12Q02952 1782 aa25.72■■□□□ 1.71
H3F3B-209ENST00000589949 TNS1Q9HBL0 1735 aaKnown RBP25.71■■□□□ 1.71
H3F3B-209ENST00000589949 CARD11Q9BXL7 1154 aa25.71■■□□□ 1.71
H3F3B-209ENST00000589949 RGPD1P0DJD0 1748 aa25.71■■□□□ 1.71
H3F3B-209ENST00000589949 AATKQ6ZMQ8 1374 aa25.7■■□□□ 1.71
H3F3B-209ENST00000589949 COL18A1P39060 1754 aa25.7■■□□□ 1.7
H3F3B-209ENST00000589949 AXIN2Q9Y2T1 843 aa25.7■■□□□ 1.7
H3F3B-209ENST00000589949 SBNO2Q9Y2G9 1366 aa25.69■■□□□ 1.7
H3F3B-209ENST00000589949 TRIM37O94972 964 aa25.69■■□□□ 1.7
H3F3B-209ENST00000589949 ZNF692Q9BU19 519 aaPredicted RBP25.69■■□□□ 1.7
H3F3B-209ENST00000589949 DISP2A7MBM2 1401 aa25.67■■□□□ 1.7
H3F3B-209ENST00000589949 FAM196AQ6ZSG2 479 aa25.67■■□□□ 1.7
H3F3B-209ENST00000589949 TONSLQ96HA7 1378 aa25.67■■□□□ 1.7
H3F3B-209ENST00000589949 CD163L1Q9NR16 1453 aa25.66■■□□□ 1.7
H3F3B-209ENST00000589949 PSDA5PKW4 1024 aaPredicted RBP25.66■■□□□ 1.7
H3F3B-209ENST00000589949 CRB1P82279 1406 aa25.65■■□□□ 1.7
H3F3B-209ENST00000589949 ARHGEF25Q86VW2 580 aa25.65■■□□□ 1.7
H3F3B-209ENST00000589949 THRAP3Q9Y2W1 955 aaKnown RBP25.65■■□□□ 1.7
H3F3B-209ENST00000589949 KTN1Q86UP2 1357 aaKnown RBP25.65■■□□□ 1.7
H3F3B-209ENST00000589949 SOX12O15370 315 aa25.64■■□□□ 1.7
H3F3B-209ENST00000589949 PDE3BQ13370 1112 aa25.64■■□□□ 1.7
H3F3B-209ENST00000589949 EZH2Q15910 746 aaKnown RBP25.64■■□□□ 1.7
H3F3B-209ENST00000589949 TTC21AQ8NDW8 1320 aa25.63■■□□□ 1.69
H3F3B-209ENST00000589949 CAMKK2Q96RR4 588 aa25.63■■□□□ 1.69
H3F3B-209ENST00000589949 NFAT5O94916 1531 aa25.63■■□□□ 1.69
H3F3B-209ENST00000589949 MON2Q7Z3U7 1717 aa25.62■■□□□ 1.69
H3F3B-209ENST00000589949 PARP4Q9UKK3 1724 aaKnown RBP25.61■■□□□ 1.69
H3F3B-209ENST00000589949 SLC12A5Q9H2X9 1139 aa25.61■■□□□ 1.69
H3F3B-209ENST00000589949 TRIM26Q12899 539 aaPredicted RBP25.6■■□□□ 1.69
H3F3B-209ENST00000589949 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.6■■□□□ 1.69
H3F3B-209ENST00000589949 APBA3O96018 575 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms