RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 GJD4Q96KN9 370 aaPredicted RBP18.36■□□□□ 0.53
RFX1-207ENST00000589937 CDK19Q9BWU1 502 aa18.36■□□□□ 0.53
RFX1-207ENST00000589937 NRKQ7Z2Y5 1582 aa18.35■□□□□ 0.53
RFX1-207ENST00000589937 NGDNQ8NEJ9 315 aaKnown RBP18.35■□□□□ 0.53
RFX1-207ENST00000589937 FAM83GA6ND36 823 aa18.33■□□□□ 0.52
RFX1-207ENST00000589937 PAK3O75914 559 aaPredicted RBP18.33■□□□□ 0.52
RFX1-207ENST00000589937 NEUROD1Q13562 356 aa18.33■□□□□ 0.52
RFX1-207ENST00000589937 POLR3AO14802 1390 aaPredicted RBP18.32■□□□□ 0.52
RFX1-207ENST00000589937 CENPJQ9HC77 1338 aaPredicted RBP18.32■□□□□ 0.52
RFX1-207ENST00000589937 NUTM2GQ5VZR2 741 aa18.31■□□□□ 0.52
RFX1-207ENST00000589937 PPIP5K1Q6PFW1 1433 aa18.31■□□□□ 0.52
RFX1-207ENST00000589937 ACEP12821 1306 aa18.3■□□□□ 0.52
RFX1-207ENST00000589937 VPS72Q15906 364 aa18.29■□□□□ 0.52
RFX1-207ENST00000589937 AKAP12Q02952 1782 aa18.29■□□□□ 0.52
RFX1-207ENST00000589937 PIK3C2AO00443 1686 aa18.28■□□□□ 0.52
RFX1-207ENST00000589937 THSD7AQ9UPZ6 1657 aa18.28■□□□□ 0.52
RFX1-207ENST00000589937 CABP2Q9NPB3 220 aa18.28■□□□□ 0.52
RFX1-207ENST00000589937 CCDC9Q9Y3X0 531 aaKnown RBP18.28■□□□□ 0.52
RFX1-207ENST00000589937 BTG4Q9NY30 223 aa18.27■□□□□ 0.52
RFX1-207ENST00000589937 LMO7Q8WWI1 1683 aa18.27■□□□□ 0.52
RFX1-207ENST00000589937 KIAA0232Q92628 1395 aa18.27■□□□□ 0.51
RFX1-207ENST00000589937 SRPK2P78362 688 aaKnown RBP18.26■□□□□ 0.51
RFX1-207ENST00000589937 ROCK2O75116 1388 aaKnown RBP18.26■□□□□ 0.51
RFX1-207ENST00000589937 NBPF8Q3BBV2 869 aa18.25■□□□□ 0.51
RFX1-207ENST00000589937 SEPT12Q8IYM1 358 aa18.25■□□□□ 0.51
RFX1-207ENST00000589937 CCDC61Q9Y6R9 512 aa18.25■□□□□ 0.51
RFX1-207ENST00000589937 CHRNA2Q15822 529 aa18.24■□□□□ 0.51
RFX1-207ENST00000589937 PLEKHG3A1L390 1219 aa18.23■□□□□ 0.51
RFX1-207ENST00000589937 PRDM11Q9NQV5 511 aa18.23■□□□□ 0.51
RFX1-207ENST00000589937 FAM98CQ17RN3 349 aaKnown RBP18.22■□□□□ 0.51
RFX1-207ENST00000589937 MON2Q7Z3U7 1717 aa18.21■□□□□ 0.51
RFX1-207ENST00000589937 TNS1Q9HBL0 1735 aaKnown RBP18.21■□□□□ 0.51
RFX1-207ENST00000589937 ZC3H6P61129 1189 aaKnown RBP18.21■□□□□ 0.51
RFX1-207ENST00000589937 USP6P35125 1406 aa18.21■□□□□ 0.51
RFX1-207ENST00000589937 CAMTA1Q9Y6Y1 1673 aa18.21■□□□□ 0.51
RFX1-207ENST00000589937 RGPD5Q99666 1765 aa18.2■□□□□ 0.5
RFX1-207ENST00000589937 SRCAPQ6ZRS2 3230 aa18.2■□□□□ 0.5
RFX1-207ENST00000589937 USP19O94966 1318 aa18.2■□□□□ 0.5
RFX1-207ENST00000589937 SLIT3O75094 1523 aa18.19■□□□□ 0.5
RFX1-207ENST00000589937 A0A0G2JS52 829 aa18.19■□□□□ 0.5
RFX1-207ENST00000589937 RGPD1P0DJD0 1748 aa18.19■□□□□ 0.5
RFX1-207ENST00000589937 BLMP54132 1417 aaPredicted RBP18.19■□□□□ 0.5
RFX1-207ENST00000589937 MYT1Q01538 1121 aa18.19■□□□□ 0.5
RFX1-207ENST00000589937 SPATA31A5Q5VU36 1347 aa18.19■□□□□ 0.5
RFX1-207ENST00000589937 SPATA31A7Q8IWB4 1347 aa18.19■□□□□ 0.5
RFX1-207ENST00000589937 ABTB2Q8N961 1025 aa18.18■□□□□ 0.5
RFX1-207ENST00000589937 CABP1Q9NZU7 370 aa18.18■□□□□ 0.5
RFX1-207ENST00000589937 WNK3Q9BYP7 1800 aa18.18■□□□□ 0.5
RFX1-207ENST00000589937 COL18A1P39060 1754 aa18.17■□□□□ 0.5
RFX1-207ENST00000589937 ONECUT3O60422 494 aaPredicted RBP18.17■□□□□ 0.5
RFX1-207ENST00000589937 FAM182BQ5T319 152 aa18.17■□□□□ 0.5
RFX1-207ENST00000589937 SSH2Q76I76 1423 aa18.16■□□□□ 0.5
RFX1-207ENST00000589937 KRT27Q7Z3Y8 459 aa18.16■□□□□ 0.5
RFX1-207ENST00000589937 STRN4Q9NRL3 753 aa18.16■□□□□ 0.5
RFX1-207ENST00000589937 EVC2Q86UK5 1308 aa18.16■□□□□ 0.5
RFX1-207ENST00000589937 DEFB132Q7Z7B7 95 aa18.15■□□□□ 0.5
RFX1-207ENST00000589937 CPDO75976 1380 aa18.14■□□□□ 0.49
RFX1-207ENST00000589937 TONSLQ96HA7 1378 aa18.14■□□□□ 0.49
RFX1-207ENST00000589937 SPATA31A1Q5TZJ5 1347 aa18.13■□□□□ 0.49
RFX1-207ENST00000589937 COL5A2P05997 1499 aaPredicted RBP18.13■□□□□ 0.49
RFX1-207ENST00000589937 PARP4Q9UKK3 1724 aaKnown RBP18.12■□□□□ 0.49
RFX1-207ENST00000589937 ZBTB7CA1YPR0 619 aa18.11■□□□□ 0.49
RFX1-207ENST00000589937 USP35Q9P2H5 1018 aa18.11■□□□□ 0.49
RFX1-207ENST00000589937 CD163L1Q9NR16 1453 aa18.11■□□□□ 0.49
RFX1-207ENST00000589937 LRRC37A3O60309 1634 aa18.11■□□□□ 0.49
RFX1-207ENST00000589937 USP54Q70EL1 1684 aa18.11■□□□□ 0.49
RFX1-207ENST00000589937 LTN1O94822 1766 aa18.1■□□□□ 0.49
RFX1-207ENST00000589937 NFAT5O94916 1531 aa18.1■□□□□ 0.49
RFX1-207ENST00000589937 GCP02774 474 aa18.1■□□□□ 0.49
RFX1-207ENST00000589937 LARP1Q6PKG0 1096 aaKnown RBP18.1■□□□□ 0.49
RFX1-207ENST00000589937 CARD11Q9BXL7 1154 aa18.1■□□□□ 0.49
RFX1-207ENST00000589937 CPSF1Q10570 1443 aaKnown RBP18.09■□□□□ 0.49
RFX1-207ENST00000589937 SBNO2Q9Y2G9 1366 aa18.09■□□□□ 0.49
RFX1-207ENST00000589937 TRIM26Q12899 539 aaPredicted RBP18.09■□□□□ 0.49
RFX1-207ENST00000589937 NLRP13Q86W25 1043 aa18.09■□□□□ 0.49
RFX1-207ENST00000589937 CCDC125Q86Z20 511 aa18.09■□□□□ 0.49
RFX1-207ENST00000589937 BRD4O60885 1362 aaPredicted RBP18.08■□□□□ 0.49
RFX1-207ENST00000589937 NLRP6P59044 892 aa18.08■□□□□ 0.48
RFX1-207ENST00000589937 TTC21BQ7Z4L5 1316 aa18.06■□□□□ 0.48
RFX1-207ENST00000589937 SOX12O15370 315 aa18.06■□□□□ 0.48
RFX1-207ENST00000589937 PEAK1Q9H792 1746 aa18.06■□□□□ 0.48
RFX1-207ENST00000589937 KTN1Q86UP2 1357 aaKnown RBP18.05■□□□□ 0.48
RFX1-207ENST00000589937 SBF2Q86WG5 1849 aa18.05■□□□□ 0.48
RFX1-207ENST00000589937 ZRANB1Q9UGI0 708 aa18.05■□□□□ 0.48
RFX1-207ENST00000589937 RREB1Q92766 1687 aa18.04■□□□□ 0.48
RFX1-207ENST00000589937 EVA1CP58658 441 aa18.04■□□□□ 0.48
RFX1-207ENST00000589937 SF3B2Q13435 895 aaKnown RBP18.03■□□□□ 0.48
RFX1-207ENST00000589937 NUP188Q5SRE5 1749 aa18.03■□□□□ 0.48
RFX1-207ENST00000589937 AATKQ6ZMQ8 1374 aa18.03■□□□□ 0.48
RFX1-207ENST00000589937 CRB1P82279 1406 aa18.02■□□□□ 0.48
RFX1-207ENST00000589937 AXIN2Q9Y2T1 843 aa18.01■□□□□ 0.47
RFX1-207ENST00000589937 EN1Q05925 392 aaPredicted RBP18■□□□□ 0.47
RFX1-207ENST00000589937 BARGINQ6ZT62 677 aa18■□□□□ 0.47
RFX1-207ENST00000589937 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18■□□□□ 0.47
RFX1-207ENST00000589937 TCP11L2Q8N4U5 519 aa18■□□□□ 0.47
RFX1-207ENST00000589937 A0A1W2PP64 1363 aa18■□□□□ 0.47
RFX1-207ENST00000589937 TTC21AQ8NDW8 1320 aa17.99■□□□□ 0.47
RFX1-207ENST00000589937 DISP2A7MBM2 1401 aa17.99■□□□□ 0.47
RFX1-207ENST00000589937 NME9Q86XW9 330 aa17.99■□□□□ 0.47
RFX1-207ENST00000589937 LRP5O75197 1615 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms