RNA–Protein interactions for RNA: ENST00000589883.1

PTBP1-215, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-215ENST00000589883 ONECUT3O60422 494 aaPredicted RBP27.72■■■□□ 2.03
PTBP1-215ENST00000589883 SF3B2Q13435 895 aaKnown RBP27.72■■■□□ 2.03
PTBP1-215ENST00000589883 PAK3O75914 559 aaPredicted RBP27.71■■■□□ 2.03
PTBP1-215ENST00000589883 ALS2Q96Q42 1657 aa27.7■■■□□ 2.02
PTBP1-215ENST00000589883 ITSN1Q15811 1721 aa27.7■■■□□ 2.02
PTBP1-215ENST00000589883 ARHGEF28Q8N1W1 1705 aaKnown RBP27.69■■■□□ 2.02
PTBP1-215ENST00000589883 KRT27Q7Z3Y8 459 aa27.68■■■□□ 2.02
PTBP1-215ENST00000589883 NUDT16Q96DE0 195 aaKnown RBP27.68■■■□□ 2.02
PTBP1-215ENST00000589883 BTG4Q9NY30 223 aa27.68■■■□□ 2.02
PTBP1-215ENST00000589883 BRWD3Q6RI45 1802 aa27.68■■■□□ 2.02
PTBP1-215ENST00000589883 A0A0G2JS52 829 aa27.67■■■□□ 2.02
PTBP1-215ENST00000589883 MYT1Q01538 1121 aa27.67■■■□□ 2.02
PTBP1-215ENST00000589883 COL14A1Q05707 1796 aaKnown RBP27.66■■■□□ 2.02
PTBP1-215ENST00000589883 KIAA1210Q9ULL0 1709 aa27.64■■■□□ 2.01
PTBP1-215ENST00000589883 ATP7BP35670 1465 aa27.64■■■□□ 2.01
PTBP1-215ENST00000589883 NBPF8Q3BBV2 869 aa27.63■■■□□ 2.01
PTBP1-215ENST00000589883 CDK19Q9BWU1 502 aa27.63■■■□□ 2.01
PTBP1-215ENST00000589883 PRDM11Q9NQV5 511 aa27.62■■■□□ 2.01
PTBP1-215ENST00000589883 NRAPQ86VF7 1730 aa27.61■■■□□ 2.01
PTBP1-215ENST00000589883 CCDC61Q9Y6R9 512 aa27.61■■■□□ 2.01
PTBP1-215ENST00000589883 FAM98CQ17RN3 349 aaKnown RBP27.6■■■□□ 2.01
PTBP1-215ENST00000589883 TIMELESSQ9UNS1 1208 aa27.6■■■□□ 2.01
PTBP1-215ENST00000589883 NBPF1Q3BBV0 1214 aa27.59■■■□□ 2.01
PTBP1-215ENST00000589883 DEFB132Q7Z7B7 95 aa27.56■■■□□ 2
PTBP1-215ENST00000589883 SPATA31A5Q5VU36 1347 aa27.56■■■□□ 2
PTBP1-215ENST00000589883 SPATA31A7Q8IWB4 1347 aa27.56■■■□□ 2
PTBP1-215ENST00000589883 POLR3AO14802 1390 aaPredicted RBP27.56■■■□□ 2
PTBP1-215ENST00000589883 PLEKHG3A1L390 1219 aa27.55■■■□□ 2
PTBP1-215ENST00000589883 CRYBG1Q9Y4K1 1723 aa27.55■■■□□ 2
PTBP1-215ENST00000589883 SRCAPQ6ZRS2 3230 aa27.54■■■□□ 2
PTBP1-215ENST00000589883 ACEP12821 1306 aa27.54■■■□□ 2
PTBP1-215ENST00000589883 BAG6P46379 1132 aa27.53■■■□□ 2
PTBP1-215ENST00000589883 TRPM1Q7Z4N2 1603 aa27.52■■■□□ 2
PTBP1-215ENST00000589883 KIAA0232Q92628 1395 aa27.52■■■□□ 2
PTBP1-215ENST00000589883 ROCK2O75116 1388 aaKnown RBP27.51■■□□□ 1.99
PTBP1-215ENST00000589883 TOPAZ1Q8N9V7 1692 aa27.5■■□□□ 1.99
PTBP1-215ENST00000589883 CENPJQ9HC77 1338 aaPredicted RBP27.5■■□□□ 1.99
PTBP1-215ENST00000589883 SRPK2P78362 688 aaKnown RBP27.5■■□□□ 1.99
PTBP1-215ENST00000589883 ABTB2Q8N961 1025 aa27.49■■□□□ 1.99
PTBP1-215ENST00000589883 ZC3H6P61129 1189 aaKnown RBP27.48■■□□□ 1.99
PTBP1-215ENST00000589883 PHRF1Q9P1Y6 1649 aaKnown RBP27.48■■□□□ 1.99
PTBP1-215ENST00000589883 CHRNA2Q15822 529 aa27.47■■□□□ 1.99
PTBP1-215ENST00000589883 NUTM2GQ5VZR2 741 aa27.47■■□□□ 1.99
PTBP1-215ENST00000589883 STRN4Q9NRL3 753 aa27.47■■□□□ 1.99
PTBP1-215ENST00000589883 SPATA31A1Q5TZJ5 1347 aa27.46■■□□□ 1.99
PTBP1-215ENST00000589883 EVA1CP58658 441 aa27.46■■□□□ 1.99
PTBP1-215ENST00000589883 BRD4O60885 1362 aaPredicted RBP27.46■■□□□ 1.99
PTBP1-215ENST00000589883 NLRP13Q86W25 1043 aa27.44■■□□□ 1.98
PTBP1-215ENST00000589883 PPIP5K1Q6PFW1 1433 aa27.43■■□□□ 1.98
PTBP1-215ENST00000589883 THSD7AQ9UPZ6 1657 aa27.43■■□□□ 1.98
PTBP1-215ENST00000589883 RGPD1P0DJD0 1748 aa27.42■■□□□ 1.98
PTBP1-215ENST00000589883 CARD11Q9BXL7 1154 aa27.42■■□□□ 1.98
PTBP1-215ENST00000589883 CPDO75976 1380 aa27.4■■□□□ 1.98
PTBP1-215ENST00000589883 CABP2Q9NPB3 220 aa27.4■■□□□ 1.98
PTBP1-215ENST00000589883 FAM196AQ6ZSG2 479 aa27.39■■□□□ 1.98
PTBP1-215ENST00000589883 USP19O94966 1318 aa27.39■■□□□ 1.97
PTBP1-215ENST00000589883 BARGINQ6ZT62 677 aa27.38■■□□□ 1.97
PTBP1-215ENST00000589883 QRICH2Q9H0J4 1663 aa27.37■■□□□ 1.97
PTBP1-215ENST00000589883 FAM182BQ5T319 152 aa27.37■■□□□ 1.97
PTBP1-215ENST00000589883 SSH2Q76I76 1423 aa27.37■■□□□ 1.97
PTBP1-215ENST00000589883 NRKQ7Z2Y5 1582 aa27.37■■□□□ 1.97
PTBP1-215ENST00000589883 USP35Q9P2H5 1018 aa27.37■■□□□ 1.97
PTBP1-215ENST00000589883 GCP02774 474 aa27.36■■□□□ 1.97
PTBP1-215ENST00000589883 EN1Q05925 392 aaPredicted RBP27.36■■□□□ 1.97
PTBP1-215ENST00000589883 EVC2Q86UK5 1308 aa27.36■■□□□ 1.97
PTBP1-215ENST00000589883 PDE3BQ13370 1112 aa27.35■■□□□ 1.97
PTBP1-215ENST00000589883 DISP2A7MBM2 1401 aa27.34■■□□□ 1.97
PTBP1-215ENST00000589883 TCP11L2Q8N4U5 519 aa27.34■■□□□ 1.97
PTBP1-215ENST00000589883 CABP1Q9NZU7 370 aa27.34■■□□□ 1.97
PTBP1-215ENST00000589883 THRAP3Q9Y2W1 955 aaKnown RBP27.34■■□□□ 1.97
PTBP1-215ENST00000589883 CAMTA1Q9Y6Y1 1673 aa27.32■■□□□ 1.96
PTBP1-215ENST00000589883 NLRP6P59044 892 aa27.31■■□□□ 1.96
PTBP1-215ENST00000589883 LARP1Q6PKG0 1096 aaKnown RBP27.31■■□□□ 1.96
PTBP1-215ENST00000589883 USP6P35125 1406 aa27.31■■□□□ 1.96
PTBP1-215ENST00000589883 TRIM37O94972 964 aa27.29■■□□□ 1.96
PTBP1-215ENST00000589883 LMO7Q8WWI1 1683 aa27.29■■□□□ 1.96
PTBP1-215ENST00000589883 LRP5O75197 1615 aa27.28■■□□□ 1.96
PTBP1-215ENST00000589883 PSDA5PKW4 1024 aaPredicted RBP27.28■■□□□ 1.96
PTBP1-215ENST00000589883 C11orf95C9JLR9 678 aaPredicted RBP27.28■■□□□ 1.96
PTBP1-215ENST00000589883 ZNF692Q9BU19 519 aaPredicted RBP27.28■■□□□ 1.96
PTBP1-215ENST00000589883 TNS1Q9HBL0 1735 aaKnown RBP27.27■■□□□ 1.96
PTBP1-215ENST00000589883 PARD3Q8TEW0 1356 aa27.27■■□□□ 1.96
PTBP1-215ENST00000589883 APBA3O96018 575 aa27.25■■□□□ 1.95
PTBP1-215ENST00000589883 COL5A2P05997 1499 aaPredicted RBP27.25■■□□□ 1.95
PTBP1-215ENST00000589883 AATKQ6ZMQ8 1374 aa27.24■■□□□ 1.95
PTBP1-215ENST00000589883 ZBTB7CA1YPR0 619 aa27.24■■□□□ 1.95
PTBP1-215ENST00000589883 EZH2Q15910 746 aaKnown RBP27.24■■□□□ 1.95
PTBP1-215ENST00000589883 USP47Q96K76 1375 aa27.23■■□□□ 1.95
PTBP1-215ENST00000589883 CRB1P82279 1406 aa27.23■■□□□ 1.95
PTBP1-215ENST00000589883 CAMKK2Q96RR4 588 aa27.22■■□□□ 1.95
PTBP1-215ENST00000589883 SLIT3O75094 1523 aa27.21■■□□□ 1.95
PTBP1-215ENST00000589883 R3HDM1Q15032 1099 aaKnown RBP27.21■■□□□ 1.95
PTBP1-215ENST00000589883 KCNH5Q8NCM2 988 aa27.21■■□□□ 1.95
PTBP1-215ENST00000589883 ST20-MTHFSA0A0A6YYL1 179 aa27.19■■□□□ 1.94
PTBP1-215ENST00000589883 TTC21AQ8NDW8 1320 aa27.18■■□□□ 1.94
PTBP1-215ENST00000589883 TTC21BQ7Z4L5 1316 aa27.17■■□□□ 1.94
PTBP1-215ENST00000589883 PARP4Q9UKK3 1724 aaKnown RBP27.17■■□□□ 1.94
PTBP1-215ENST00000589883 TOM1L2Q6ZVM7 507 aa27.17■■□□□ 1.94
PTBP1-215ENST00000589883 PIK3C2AO00443 1686 aa27.15■■□□□ 1.94
PTBP1-215ENST00000589883 NBPF14Q5TI25 921 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms