RNA–Protein interactions for RNA: ENST00000589877.5

SMAD2-211, Transcript of SMAD family member 2, humanhuman

TSL 3

Gene SMAD2, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-211ENST00000589877 EP400Q96L91 3159 aa24.23■■□□□ 1.47
SMAD2-211ENST00000589877 ITSN1Q15811 1721 aa24.23■■□□□ 1.47
SMAD2-211ENST00000589877 ACEP12821 1306 aa24.21■■□□□ 1.47
SMAD2-211ENST00000589877 PLEKHG3A1L390 1219 aa24.21■■□□□ 1.47
SMAD2-211ENST00000589877 NBPF8Q3BBV2 869 aa24.21■■□□□ 1.47
SMAD2-211ENST00000589877 L3MBTL2Q969R5 705 aa24.21■■□□□ 1.47
SMAD2-211ENST00000589877 BRWD3Q6RI45 1802 aa24.2■■□□□ 1.46
SMAD2-211ENST00000589877 POLR3AO14802 1390 aaPredicted RBP24.19■■□□□ 1.46
SMAD2-211ENST00000589877 SIN3AQ96ST3 1273 aa24.19■■□□□ 1.46
SMAD2-211ENST00000589877 COL14A1Q05707 1796 aaKnown RBP24.18■■□□□ 1.46
SMAD2-211ENST00000589877 CENPJQ9HC77 1338 aaPredicted RBP24.17■■□□□ 1.46
SMAD2-211ENST00000589877 NRAPQ86VF7 1730 aa24.17■■□□□ 1.46
SMAD2-211ENST00000589877 CRYBG1Q9Y4K1 1723 aa24.17■■□□□ 1.46
SMAD2-211ENST00000589877 KRT27Q7Z3Y8 459 aa24.16■■□□□ 1.46
SMAD2-211ENST00000589877 PRDM11Q9NQV5 511 aa24.16■■□□□ 1.46
SMAD2-211ENST00000589877 SRPK2P78362 688 aaKnown RBP24.15■■□□□ 1.46
SMAD2-211ENST00000589877 FAM98CQ17RN3 349 aaKnown RBP24.15■■□□□ 1.46
SMAD2-211ENST00000589877 NUTM2GQ5VZR2 741 aa24.15■■□□□ 1.46
SMAD2-211ENST00000589877 TOPAZ1Q8N9V7 1692 aa24.15■■□□□ 1.46
SMAD2-211ENST00000589877 BLMP54132 1417 aaPredicted RBP24.14■■□□□ 1.45
SMAD2-211ENST00000589877 NEUROD1Q13562 356 aa24.13■■□□□ 1.45
SMAD2-211ENST00000589877 CABP2Q9NPB3 220 aa24.13■■□□□ 1.45
SMAD2-211ENST00000589877 ZRANB1Q9UGI0 708 aa24.13■■□□□ 1.45
SMAD2-211ENST00000589877 SPATA31A5Q5VU36 1347 aa24.12■■□□□ 1.45
SMAD2-211ENST00000589877 SPATA31A7Q8IWB4 1347 aa24.12■■□□□ 1.45
SMAD2-211ENST00000589877 KIAA0232Q92628 1395 aa24.12■■□□□ 1.45
SMAD2-211ENST00000589877 A0A0G2JS52 829 aa24.11■■□□□ 1.45
SMAD2-211ENST00000589877 MYT1Q01538 1121 aa24.11■■□□□ 1.45
SMAD2-211ENST00000589877 ABTB2Q8N961 1025 aa24.11■■□□□ 1.45
SMAD2-211ENST00000589877 ZC3H6P61129 1189 aaKnown RBP24.1■■□□□ 1.45
SMAD2-211ENST00000589877 CHRNA2Q15822 529 aa24.1■■□□□ 1.45
SMAD2-211ENST00000589877 PPIP5K1Q6PFW1 1433 aa24.1■■□□□ 1.45
SMAD2-211ENST00000589877 SF3B2Q13435 895 aaKnown RBP24.09■■□□□ 1.45
SMAD2-211ENST00000589877 DEFB132Q7Z7B7 95 aa24.08■■□□□ 1.45
SMAD2-211ENST00000589877 PHRF1Q9P1Y6 1649 aaKnown RBP24.06■■□□□ 1.44
SMAD2-211ENST00000589877 CABP1Q9NZU7 370 aa24.06■■□□□ 1.44
SMAD2-211ENST00000589877 QRICH2Q9H0J4 1663 aa24.05■■□□□ 1.44
SMAD2-211ENST00000589877 NLRP13Q86W25 1043 aa24.05■■□□□ 1.44
SMAD2-211ENST00000589877 STRN4Q9NRL3 753 aa24.05■■□□□ 1.44
SMAD2-211ENST00000589877 SPATA31A1Q5TZJ5 1347 aa24.05■■□□□ 1.44
SMAD2-211ENST00000589877 TRPM1Q7Z4N2 1603 aa24.04■■□□□ 1.44
SMAD2-211ENST00000589877 USP19O94966 1318 aa24.03■■□□□ 1.44
SMAD2-211ENST00000589877 EVC2Q86UK5 1308 aa24.03■■□□□ 1.44
SMAD2-211ENST00000589877 BRD4O60885 1362 aaPredicted RBP24.03■■□□□ 1.44
SMAD2-211ENST00000589877 EVA1CP58658 441 aa24.02■■□□□ 1.44
SMAD2-211ENST00000589877 ROCK2O75116 1388 aaKnown RBP24.02■■□□□ 1.44
SMAD2-211ENST00000589877 GCP02774 474 aa24.01■■□□□ 1.43
SMAD2-211ENST00000589877 FAM182BQ5T319 152 aa24■■□□□ 1.43
SMAD2-211ENST00000589877 CPDO75976 1380 aa24■■□□□ 1.43
SMAD2-211ENST00000589877 THSD7AQ9UPZ6 1657 aa23.99■■□□□ 1.43
SMAD2-211ENST00000589877 NRKQ7Z2Y5 1582 aa23.98■■□□□ 1.43
SMAD2-211ENST00000589877 USP6P35125 1406 aa23.97■■□□□ 1.43
SMAD2-211ENST00000589877 BAG6P46379 1132 aa23.97■■□□□ 1.43
SMAD2-211ENST00000589877 NLRP6P59044 892 aa23.97■■□□□ 1.43
SMAD2-211ENST00000589877 USP35Q9P2H5 1018 aa23.97■■□□□ 1.43
SMAD2-211ENST00000589877 CAMTA1Q9Y6Y1 1673 aa23.97■■□□□ 1.43
SMAD2-211ENST00000589877 SSH2Q76I76 1423 aa23.96■■□□□ 1.43
SMAD2-211ENST00000589877 LARP1Q6PKG0 1096 aaKnown RBP23.96■■□□□ 1.43
SMAD2-211ENST00000589877 SRCAPQ6ZRS2 3230 aa23.96■■□□□ 1.43
SMAD2-211ENST00000589877 BARGINQ6ZT62 677 aa23.95■■□□□ 1.42
SMAD2-211ENST00000589877 ZNF692Q9BU19 519 aaPredicted RBP23.94■■□□□ 1.42
SMAD2-211ENST00000589877 LMO7Q8WWI1 1683 aa23.92■■□□□ 1.42
SMAD2-211ENST00000589877 EN1Q05925 392 aaPredicted RBP23.91■■□□□ 1.42
SMAD2-211ENST00000589877 FAM196AQ6ZSG2 479 aa23.91■■□□□ 1.42
SMAD2-211ENST00000589877 TCP11L2Q8N4U5 519 aa23.91■■□□□ 1.42
SMAD2-211ENST00000589877 TTC21BQ7Z4L5 1316 aa23.89■■□□□ 1.42
SMAD2-211ENST00000589877 PDE3BQ13370 1112 aa23.89■■□□□ 1.41
SMAD2-211ENST00000589877 THRAP3Q9Y2W1 955 aaKnown RBP23.89■■□□□ 1.41
SMAD2-211ENST00000589877 RGPD1P0DJD0 1748 aa23.89■■□□□ 1.41
SMAD2-211ENST00000589877 ZBTB7CA1YPR0 619 aa23.88■■□□□ 1.41
SMAD2-211ENST00000589877 CARD11Q9BXL7 1154 aa23.88■■□□□ 1.41
SMAD2-211ENST00000589877 SLIT3O75094 1523 aa23.87■■□□□ 1.41
SMAD2-211ENST00000589877 AATKQ6ZMQ8 1374 aa23.87■■□□□ 1.41
SMAD2-211ENST00000589877 COL5A2P05997 1499 aaPredicted RBP23.87■■□□□ 1.41
SMAD2-211ENST00000589877 TRIM37O94972 964 aa23.86■■□□□ 1.41
SMAD2-211ENST00000589877 PIK3C2AO00443 1686 aa23.86■■□□□ 1.41
SMAD2-211ENST00000589877 DISP2A7MBM2 1401 aa23.84■■□□□ 1.41
SMAD2-211ENST00000589877 CPSF1Q10570 1443 aaKnown RBP23.84■■□□□ 1.41
SMAD2-211ENST00000589877 SBNO2Q9Y2G9 1366 aa23.84■■□□□ 1.41
SMAD2-211ENST00000589877 TTC21AQ8NDW8 1320 aa23.84■■□□□ 1.41
SMAD2-211ENST00000589877 AKAP12Q02952 1782 aa23.83■■□□□ 1.41
SMAD2-211ENST00000589877 TONSLQ96HA7 1378 aa23.83■■□□□ 1.41
SMAD2-211ENST00000589877 KCNH5Q8NCM2 988 aa23.83■■□□□ 1.41
SMAD2-211ENST00000589877 AXIN2Q9Y2T1 843 aa23.83■■□□□ 1.41
SMAD2-211ENST00000589877 CRB1P82279 1406 aa23.83■■□□□ 1.4
SMAD2-211ENST00000589877 KTN1Q86UP2 1357 aaKnown RBP23.82■■□□□ 1.4
SMAD2-211ENST00000589877 PSDA5PKW4 1024 aaPredicted RBP23.82■■□□□ 1.4
SMAD2-211ENST00000589877 EZH2Q15910 746 aaKnown RBP23.82■■□□□ 1.4
SMAD2-211ENST00000589877 ARHGEF25Q86VW2 580 aa23.82■■□□□ 1.4
SMAD2-211ENST00000589877 TNS1Q9HBL0 1735 aaKnown RBP23.81■■□□□ 1.4
SMAD2-211ENST00000589877 CAMKK2Q96RR4 588 aa23.81■■□□□ 1.4
SMAD2-211ENST00000589877 COL18A1P39060 1754 aa23.8■■□□□ 1.4
SMAD2-211ENST00000589877 APBA3O96018 575 aa23.8■■□□□ 1.4
SMAD2-211ENST00000589877 TOM1L2Q6ZVM7 507 aa23.8■■□□□ 1.4
SMAD2-211ENST00000589877 SOX12O15370 315 aa23.78■■□□□ 1.4
SMAD2-211ENST00000589877 TRIM26Q12899 539 aaPredicted RBP23.77■■□□□ 1.4
SMAD2-211ENST00000589877 WDR17Q8IZU2 1322 aa23.77■■□□□ 1.4
SMAD2-211ENST00000589877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.76■■□□□ 1.391e-6■■■□□ 19.1
SMAD2-211ENST00000589877 TMC1Q8TDI8 760 aa23.76■■□□□ 1.39
SMAD2-211ENST00000589877 PARP4Q9UKK3 1724 aaKnown RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms