RNA–Protein interactions for RNA: ENST00000589729.1

AC040963.1-202, humanhuman

TSL 5 BASIC

Gene AC040963.1, Length 644 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040963.1-202ENST00000589729 CABLES1Q8TDN4 633 aa23.55■■□□□ 1.36
AC040963.1-202ENST00000589729 EIF4G2P78344 907 aaKnown RBP eCLIP23.54■■□□□ 1.36
AC040963.1-202ENST00000589729 NUTM2GQ5VZR2 741 aa23.54■■□□□ 1.36
AC040963.1-202ENST00000589729 TMC1Q8TDI8 760 aa23.54■■□□□ 1.36
AC040963.1-202ENST00000589729 ADAMTS2O95450 1211 aa23.53■■□□□ 1.36
AC040963.1-202ENST00000589729 SLC12A5Q9H2X9 1139 aa23.53■■□□□ 1.36
AC040963.1-202ENST00000589729 CPSF1Q10570 1443 aaKnown RBP23.52■■□□□ 1.36
AC040963.1-202ENST00000589729 TMF1P82094 1093 aa23.52■■□□□ 1.36
AC040963.1-202ENST00000589729 MEX3CQ5U5Q3 659 aaKnown RBP23.52■■□□□ 1.36
AC040963.1-202ENST00000589729 ARHGEF10O15013 1369 aa23.52■■□□□ 1.36
AC040963.1-202ENST00000589729 A0A1W2PP64 1363 aa23.51■■□□□ 1.35
AC040963.1-202ENST00000589729 SSH2Q76I76 1423 aa23.5■■□□□ 1.35
AC040963.1-202ENST00000589729 PHF23Q9BUL5 403 aaPredicted RBP23.49■■□□□ 1.35
AC040963.1-202ENST00000589729 POLR3GLQ9BT43 218 aa23.48■■□□□ 1.35
AC040963.1-202ENST00000589729 RGS17Q9UGC6 210 aaPredicted RBP23.48■■□□□ 1.35
AC040963.1-202ENST00000589729 KTN1Q86UP2 1357 aaKnown RBP23.48■■□□□ 1.35
AC040963.1-202ENST00000589729 PLCH1Q4KWH8 1693 aa23.48■■□□□ 1.35
AC040963.1-202ENST00000589729 C8orf37Q96NL8 207 aa23.47■■□□□ 1.35
AC040963.1-202ENST00000589729 C11orf95C9JLR9 678 aaPredicted RBP23.45■■□□□ 1.34
AC040963.1-202ENST00000589729 TTC21BQ7Z4L5 1316 aa23.42■■□□□ 1.34
AC040963.1-202ENST00000589729 HAP1P54257 671 aaPredicted RBP23.42■■□□□ 1.34
AC040963.1-202ENST00000589729 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.42■■□□□ 1.34
AC040963.1-202ENST00000589729 ABTB2Q8N961 1025 aa23.42■■□□□ 1.34
AC040963.1-202ENST00000589729 ZRANB1Q9UGI0 708 aa23.42■■□□□ 1.34
AC040963.1-202ENST00000589729 NINLQ9Y2I6 1382 aa23.41■■□□□ 1.34
AC040963.1-202ENST00000589729 AFF2P51816 1311 aa23.41■■□□□ 1.34
AC040963.1-202ENST00000589729 PUS7Q96PZ0 661 aaKnown RBP23.41■■□□□ 1.34
AC040963.1-202ENST00000589729 USP54Q70EL1 1684 aa23.4■■□□□ 1.34
AC040963.1-202ENST00000589729 KIF20BQ96Q89 1820 aa23.4■■□□□ 1.34
AC040963.1-202ENST00000589729 ANKRD36BQ8N2N9 1353 aa23.4■■□□□ 1.34
AC040963.1-202ENST00000589729 SLIT3O75094 1523 aa23.39■■□□□ 1.34
AC040963.1-202ENST00000589729 NME9Q86XW9 330 aa23.39■■□□□ 1.33
AC040963.1-202ENST00000589729 EDC4Q6P2E9 1401 aaKnown RBP23.39■■□□□ 1.33
AC040963.1-202ENST00000589729 USP19O94966 1318 aa23.38■■□□□ 1.33
AC040963.1-202ENST00000589729 POTEAQ6S8J7 498 aa23.38■■□□□ 1.33
AC040963.1-202ENST00000589729 HDGFL2Q7Z4V5 671 aaPredicted RBP23.38■■□□□ 1.33
AC040963.1-202ENST00000589729 NRAPQ86VF7 1730 aa23.38■■□□□ 1.33
AC040963.1-202ENST00000589729 SLC24A1O60721 1099 aa23.36■■□□□ 1.33
AC040963.1-202ENST00000589729 CDCA8Q53HL2 280 aa23.36■■□□□ 1.33
AC040963.1-202ENST00000589729 ILDR2Q71H61 639 aa23.36■■□□□ 1.33
AC040963.1-202ENST00000589729 NGLY1Q96IV0 654 aa23.36■■□□□ 1.33
AC040963.1-202ENST00000589729 ZNF692Q9BU19 519 aaPredicted RBP23.36■■□□□ 1.33
AC040963.1-202ENST00000589729 TERF2IPQ9NYB0 399 aa23.36■■□□□ 1.33
AC040963.1-202ENST00000589729 COL14A1Q05707 1796 aaKnown RBP23.36■■□□□ 1.33
AC040963.1-202ENST00000589729 BRD4O60885 1362 aaPredicted RBP23.36■■□□□ 1.33
AC040963.1-202ENST00000589729 KIF7Q2M1P5 1343 aa23.35■■□□□ 1.33
AC040963.1-202ENST00000589729 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.34■■□□□ 1.33
AC040963.1-202ENST00000589729 NWD2Q9ULI1 1742 aa23.34■■□□□ 1.33
AC040963.1-202ENST00000589729 SOX12O15370 315 aa23.34■■□□□ 1.33
AC040963.1-202ENST00000589729 NLRP6P59044 892 aa23.34■■□□□ 1.33
AC040963.1-202ENST00000589729 KIAA0232Q92628 1395 aa23.34■■□□□ 1.33
AC040963.1-202ENST00000589729 TTC21AQ8NDW8 1320 aa23.33■■□□□ 1.33
AC040963.1-202ENST00000589729 NSD3Q9BZ95 1437 aa23.33■■□□□ 1.33
AC040963.1-202ENST00000589729 SLIT2O94813 1529 aa23.33■■□□□ 1.33
AC040963.1-202ENST00000589729 NFAT5O94916 1531 aa23.33■■□□□ 1.33
AC040963.1-202ENST00000589729 BCL9LQ86UU0 1499 aa23.32■■□□□ 1.32
AC040963.1-202ENST00000589729 ZC3H6P61129 1189 aaKnown RBP23.32■■□□□ 1.32
AC040963.1-202ENST00000589729 CHRNA2Q15822 529 aa23.32■■□□□ 1.32
AC040963.1-202ENST00000589729 FAM83GA6ND36 823 aa23.31■■□□□ 1.32
AC040963.1-202ENST00000589729 CARD14Q9BXL6 1004 aa23.31■■□□□ 1.32
AC040963.1-202ENST00000589729 LTN1O94822 1766 aa23.31■■□□□ 1.32
AC040963.1-202ENST00000589729 OVOS2A0A0J9YW53 1432 aa23.31■■□□□ 1.32
AC040963.1-202ENST00000589729 OVOS2Q6IE36 1432 aa23.31■■□□□ 1.32
AC040963.1-202ENST00000589729 LMO7Q8WWI1 1683 aa23.31■■□□□ 1.32
AC040963.1-202ENST00000589729 NLRP13Q86W25 1043 aa23.3■■□□□ 1.32
AC040963.1-202ENST00000589729 RGPD5Q99666 1765 aa23.29■■□□□ 1.32
AC040963.1-202ENST00000589729 ZBTB7CA1YPR0 619 aa23.29■■□□□ 1.32
AC040963.1-202ENST00000589729 PRDM11Q9NQV5 511 aa23.28■■□□□ 1.32
AC040963.1-202ENST00000589729 USP21Q9UK80 565 aa23.28■■□□□ 1.32
AC040963.1-202ENST00000589729 COL18A1P39060 1754 aa23.27■■□□□ 1.32
AC040963.1-202ENST00000589729 GCP02774 474 aa23.27■■□□□ 1.32
AC040963.1-202ENST00000589729 FNBP4Q8N3X1 1017 aaPredicted RBP23.27■■□□□ 1.32
AC040963.1-202ENST00000589729 USP31Q70CQ4 1352 aa23.27■■□□□ 1.31
AC040963.1-202ENST00000589729 CCDC7Q96M83 1385 aa23.27■■□□□ 1.31
AC040963.1-202ENST00000589729 ATRNO75882 1429 aa23.26■■□□□ 1.31
AC040963.1-202ENST00000589729 WASHC2AQ641Q2 1341 aa23.26■■□□□ 1.31
AC040963.1-202ENST00000589729 ZNF772Q68DY9 489 aaPredicted RBP23.25■■□□□ 1.31
AC040963.1-202ENST00000589729 GLI3P10071 1580 aa23.25■■□□□ 1.31
AC040963.1-202ENST00000589729 CAMTA1Q9Y6Y1 1673 aa23.25■■□□□ 1.31
AC040963.1-202ENST00000589729 ANKRD26Q9UPS8 1709 aa23.24■■□□□ 1.31
AC040963.1-202ENST00000589729 CPDO75976 1380 aa23.24■■□□□ 1.31
AC040963.1-202ENST00000589729 GGNBP2Q9H3C7 697 aa23.23■■□□□ 1.31
AC040963.1-202ENST00000589729 BTG4Q9NY30 223 aa23.23■■□□□ 1.31
AC040963.1-202ENST00000589729 PANK3Q9H999 370 aa23.22■■□□□ 1.31
AC040963.1-202ENST00000589729 FBLN1P23142 703 aa23.21■■□□□ 1.31
AC040963.1-202ENST00000589729 QTRT2Q9H974 415 aaKnown RBP23.21■■□□□ 1.31
AC040963.1-202ENST00000589729 FYB1O15117 783 aa23.2■■□□□ 1.3
AC040963.1-202ENST00000589729 UNC5CLQ8IV45 518 aa23.2■■□□□ 1.3
AC040963.1-202ENST00000589729 RGS12O14924 1447 aa23.19■■□□□ 1.3
AC040963.1-202ENST00000589729 COL5A2P05997 1499 aaPredicted RBP23.17■■□□□ 1.3
AC040963.1-202ENST00000589729 STRN4Q9NRL3 753 aa23.17■■□□□ 1.3
AC040963.1-202ENST00000589729 TRPC5Q9UL62 973 aaPredicted RBP23.17■■□□□ 1.3
AC040963.1-202ENST00000589729 PEAK1Q9H792 1746 aa23.16■■□□□ 1.3
AC040963.1-202ENST00000589729 COG3Q96JB2 828 aa23.16■■□□□ 1.3
AC040963.1-202ENST00000589729 ARHGEF25Q86VW2 580 aa23.15■■□□□ 1.3
AC040963.1-202ENST00000589729 RXRBP28702 533 aa23.14■■□□□ 1.29
AC040963.1-202ENST00000589729 KCNH5Q8NCM2 988 aa23.14■■□□□ 1.29
AC040963.1-202ENST00000589729 AXIN2Q9Y2T1 843 aa23.14■■□□□ 1.29
AC040963.1-202ENST00000589729 CCDC9Q9Y3X0 531 aaKnown RBP23.14■■□□□ 1.29
AC040963.1-202ENST00000589729 AATKQ6ZMQ8 1374 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms