RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 HRCP23327 699 aa26.61■■□□□ 1.85
CXXC1-211ENST00000589548 ACIN1Q9UKV3 1341 aaKnown RBP26.61■■□□□ 1.85
CXXC1-211ENST00000589548 FAM182BQ5T319 152 aa26.6■■□□□ 1.85
CXXC1-211ENST00000589548 GPRASP1Q5JY77 1395 aa26.59■■□□□ 1.85
CXXC1-211ENST00000589548 TRAK1Q9UPV9 953 aa26.59■■□□□ 1.85
CXXC1-211ENST00000589548 SPATA31A5Q5VU36 1347 aa26.59■■□□□ 1.85
CXXC1-211ENST00000589548 SPATA31A7Q8IWB4 1347 aa26.59■■□□□ 1.85
CXXC1-211ENST00000589548 MINK1Q8N4C8 1332 aaPredicted RBP26.59■■□□□ 1.85
CXXC1-211ENST00000589548 EN1Q05925 392 aaPredicted RBP26.58■■□□□ 1.85
CXXC1-211ENST00000589548 ITSN1Q15811 1721 aa26.58■■□□□ 1.85
CXXC1-211ENST00000589548 PHRF1Q9P1Y6 1649 aaKnown RBP26.57■■□□□ 1.84
CXXC1-211ENST00000589548 ARHGEF28Q8N1W1 1705 aaKnown RBP26.57■■□□□ 1.84
CXXC1-211ENST00000589548 DISP2A7MBM2 1401 aa26.56■■□□□ 1.84
CXXC1-211ENST00000589548 EIF3AQ14152 1382 aaKnown RBP26.56■■□□□ 1.84
CXXC1-211ENST00000589548 WASLO00401 505 aaPredicted RBP26.53■■□□□ 1.84
CXXC1-211ENST00000589548 ATP7BP35670 1465 aa26.52■■□□□ 1.84
CXXC1-211ENST00000589548 PRDM11Q9NQV5 511 aa26.5■■□□□ 1.83
CXXC1-211ENST00000589548 R3HDM1Q15032 1099 aaKnown RBP26.49■■□□□ 1.83
CXXC1-211ENST00000589548 NGDNQ8NEJ9 315 aaKnown RBP26.49■■□□□ 1.83
CXXC1-211ENST00000589548 KIAA0232Q92628 1395 aa26.48■■□□□ 1.83
CXXC1-211ENST00000589548 RAB3GAP2Q9H2M9 1393 aa26.48■■□□□ 1.83
CXXC1-211ENST00000589548 TOPAZ1Q8N9V7 1692 aa26.48■■□□□ 1.83
CXXC1-211ENST00000589548 SPATA31A1Q5TZJ5 1347 aa26.48■■□□□ 1.83
CXXC1-211ENST00000589548 PAK3O75914 559 aaPredicted RBP26.48■■□□□ 1.83
CXXC1-211ENST00000589548 RREB1Q92766 1687 aa26.47■■□□□ 1.83
CXXC1-211ENST00000589548 EZH2Q15910 746 aaKnown RBP26.46■■□□□ 1.83
CXXC1-211ENST00000589548 KDM2AQ9Y2K7 1162 aa26.46■■□□□ 1.83
CXXC1-211ENST00000589548 CHRNA2Q15822 529 aa26.45■■□□□ 1.82
CXXC1-211ENST00000589548 NUP188Q5SRE5 1749 aa26.44■■□□□ 1.82
CXXC1-211ENST00000589548 NRKQ7Z2Y5 1582 aa26.43■■□□□ 1.82
CXXC1-211ENST00000589548 DCAF11Q8TEB1 546 aa26.43■■□□□ 1.82
CXXC1-211ENST00000589548 CAMKK2Q96RR4 588 aa26.43■■□□□ 1.82
CXXC1-211ENST00000589548 TRIM37O94972 964 aa26.42■■□□□ 1.82
CXXC1-211ENST00000589548 NUDT16Q96DE0 195 aaKnown RBP26.41■■□□□ 1.82
CXXC1-211ENST00000589548 STRN4Q9NRL3 753 aa26.4■■□□□ 1.82
CXXC1-211ENST00000589548 LMO7Q8WWI1 1683 aa26.4■■□□□ 1.82
CXXC1-211ENST00000589548 ZC3H6P61129 1189 aaKnown RBP26.39■■□□□ 1.82
CXXC1-211ENST00000589548 NUTM2GQ5VZR2 741 aa26.39■■□□□ 1.82
CXXC1-211ENST00000589548 FAM196AQ6ZSG2 479 aa26.38■■□□□ 1.81
CXXC1-211ENST00000589548 SSH2Q76I76 1423 aa26.38■■□□□ 1.81
CXXC1-211ENST00000589548 CAMTA1Q9Y6Y1 1673 aa26.38■■□□□ 1.81
CXXC1-211ENST00000589548 POLR3AO14802 1390 aaPredicted RBP26.37■■□□□ 1.81
CXXC1-211ENST00000589548 USP35Q9P2H5 1018 aa26.35■■□□□ 1.81
CXXC1-211ENST00000589548 PARD3Q8TEW0 1356 aa26.34■■□□□ 1.81
CXXC1-211ENST00000589548 APBA3O96018 575 aa26.33■■□□□ 1.81
CXXC1-211ENST00000589548 CDK19Q9BWU1 502 aa26.33■■□□□ 1.81
CXXC1-211ENST00000589548 ACEP12821 1306 aa26.33■■□□□ 1.81
CXXC1-211ENST00000589548 PARP4Q9UKK3 1724 aaKnown RBP26.32■■□□□ 1.8
CXXC1-211ENST00000589548 BARGINQ6ZT62 677 aa26.32■■□□□ 1.8
CXXC1-211ENST00000589548 STAC3Q96MF2 364 aa26.31■■□□□ 1.8
CXXC1-211ENST00000589548 KIAA1210Q9ULL0 1709 aa26.31■■□□□ 1.8
CXXC1-211ENST00000589548 LARP1Q6PKG0 1096 aaKnown RBP26.3■■□□□ 1.8
CXXC1-211ENST00000589548 NBPF8Q3BBV2 869 aa26.29■■□□□ 1.8
CXXC1-211ENST00000589548 USP19O94966 1318 aa26.29■■□□□ 1.8
CXXC1-211ENST00000589548 CPDO75976 1380 aa26.29■■□□□ 1.8
CXXC1-211ENST00000589548 EVA1CP58658 441 aa26.27■■□□□ 1.8
CXXC1-211ENST00000589548 PEAK1Q9H792 1746 aa26.27■■□□□ 1.8
CXXC1-211ENST00000589548 SBF2Q86WG5 1849 aa26.26■■□□□ 1.79
CXXC1-211ENST00000589548 PLEKHG3A1L390 1219 aa26.26■■□□□ 1.79
CXXC1-211ENST00000589548 PDE3BQ13370 1112 aa26.26■■□□□ 1.79
CXXC1-211ENST00000589548 CCDC61Q9Y6R9 512 aa26.26■■□□□ 1.79
CXXC1-211ENST00000589548 TCP11L2Q8N4U5 519 aa26.25■■□□□ 1.79
CXXC1-211ENST00000589548 COL5A2P05997 1499 aaPredicted RBP26.24■■□□□ 1.79
CXXC1-211ENST00000589548 ABTB2Q8N961 1025 aa26.24■■□□□ 1.79
CXXC1-211ENST00000589548 LRRC37A3O60309 1634 aa26.22■■□□□ 1.79
CXXC1-211ENST00000589548 RGPD3A6NKT7 1758 aaPredicted RBP26.22■■□□□ 1.79
CXXC1-211ENST00000589548 RGPD4Q7Z3J3 1758 aa26.22■■□□□ 1.79
CXXC1-211ENST00000589548 WNK3Q9BYP7 1800 aa26.21■■□□□ 1.79
CXXC1-211ENST00000589548 PPIP5K1Q6PFW1 1433 aa26.19■■□□□ 1.78
CXXC1-211ENST00000589548 YY1P25490 414 aa26.18■■□□□ 1.78
CXXC1-211ENST00000589548 THRAP3Q9Y2W1 955 aaKnown RBP26.18■■□□□ 1.78
CXXC1-211ENST00000589548 QRICH2Q9H0J4 1663 aa26.18■■□□□ 1.78
CXXC1-211ENST00000589548 COL18A1P39060 1754 aa26.18■■□□□ 1.78
CXXC1-211ENST00000589548 GCP02774 474 aa26.17■■□□□ 1.78
CXXC1-211ENST00000589548 NBPF14Q5TI25 921 aa26.17■■□□□ 1.78
CXXC1-211ENST00000589548 CRB1P82279 1406 aa26.16■■□□□ 1.78
CXXC1-211ENST00000589548 SLIT3O75094 1523 aa26.16■■□□□ 1.78
CXXC1-211ENST00000589548 NBPF1Q3BBV0 1214 aa26.16■■□□□ 1.78
CXXC1-211ENST00000589548 CASZ1Q86V15 1759 aa26.15■■□□□ 1.78
CXXC1-211ENST00000589548 NLRP13Q86W25 1043 aa26.15■■□□□ 1.78
CXXC1-211ENST00000589548 PIK3C2AO00443 1686 aa26.14■■□□□ 1.78
CXXC1-211ENST00000589548 OVOS2A0A0G2JMS6 1433 aa26.14■■□□□ 1.77
CXXC1-211ENST00000589548 OVOS2A0A0J9YW53 1432 aa26.14■■□□□ 1.77
CXXC1-211ENST00000589548 OVOS2Q6IE36 1432 aa26.14■■□□□ 1.77
CXXC1-211ENST00000589548 CABP2Q9NPB3 220 aa26.12■■□□□ 1.77
CXXC1-211ENST00000589548 AKAP12Q02952 1782 aa26.12■■□□□ 1.77
CXXC1-211ENST00000589548 RGPD5Q99666 1765 aa26.12■■□□□ 1.77
CXXC1-211ENST00000589548 SRPK2P78362 688 aaKnown RBP26.11■■□□□ 1.77
CXXC1-211ENST00000589548 SPON1Q9HCB6 807 aa26.11■■□□□ 1.77
CXXC1-211ENST00000589548 USP6P35125 1406 aa26.11■■□□□ 1.77
CXXC1-211ENST00000589548 KCNQ2O43526 872 aa26.1■■□□□ 1.77
CXXC1-211ENST00000589548 AATKQ6ZMQ8 1374 aa26.09■■□□□ 1.77
CXXC1-211ENST00000589548 CENPJQ9HC77 1338 aaPredicted RBP26.09■■□□□ 1.77
CXXC1-211ENST00000589548 BRD4O60885 1362 aaPredicted RBP26.08■■□□□ 1.77
CXXC1-211ENST00000589548 ZBTB7CA1YPR0 619 aa26.08■■□□□ 1.77
CXXC1-211ENST00000589548 PTF1AQ7RTS3 328 aa26.08■■□□□ 1.77
CXXC1-211ENST00000589548 ANO8Q9HCE9 1232 aaPredicted RBP26.08■■□□□ 1.77
CXXC1-211ENST00000589548 NINLQ9Y2I6 1382 aa26.07■■□□□ 1.76
CXXC1-211ENST00000589548 PPP1R1BQ9UD71 204 aaPredicted RBP26.07■■□□□ 1.76
CXXC1-211ENST00000589548 C11orf95C9JLR9 678 aaPredicted RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms