RNA–Protein interactions for RNA: ENST00000589545.1

HPS5-211, Transcript of HPS5, biogenesis of lysosomal organelles complex 2 subunit 2, humanhuman

TSL 3

Gene HPS5, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5-211ENST00000589545 CD163L1Q9NR16 1453 aa25.05■■□□□ 1.6
HPS5-211ENST00000589545 PAK3O75914 559 aaPredicted RBP25.05■■□□□ 1.6
HPS5-211ENST00000589545 C8orf37Q96NL8 207 aa25.05■■□□□ 1.6
HPS5-211ENST00000589545 PIK3C2AO00443 1686 aa25.04■■□□□ 1.6
HPS5-211ENST00000589545 USP6P35125 1406 aa25.03■■□□□ 1.6
HPS5-211ENST00000589545 NUTM2GQ5VZR2 741 aa25.03■■□□□ 1.6
HPS5-211ENST00000589545 ARHGEF10O15013 1369 aa25.03■■□□□ 1.6
HPS5-211ENST00000589545 ATAD2Q6PL18 1390 aa25.03■■□□□ 1.6
HPS5-211ENST00000589545 AFF2P51816 1311 aa25.02■■□□□ 1.6
HPS5-211ENST00000589545 SSH2Q76I76 1423 aa25.01■■□□□ 1.59
HPS5-211ENST00000589545 MYOM1P52179 1685 aa25.01■■□□□ 1.59
HPS5-211ENST00000589545 PLCH1Q4KWH8 1693 aa25■■□□□ 1.59
HPS5-211ENST00000589545 CPSF1Q10570 1443 aaKnown RBP24.99■■□□□ 1.59
HPS5-211ENST00000589545 SLC12A5Q9H2X9 1139 aa24.98■■□□□ 1.59
HPS5-211ENST00000589545 HSPA5P11021 654 aaKnown RBP24.96■■□□□ 1.59
HPS5-211ENST00000589545 TMC1Q8TDI8 760 aa24.95■■□□□ 1.58
HPS5-211ENST00000589545 NGLY1Q96IV0 654 aa24.94■■□□□ 1.58
HPS5-211ENST00000589545 A0A1W2PP64 1363 aa24.93■■□□□ 1.58
HPS5-211ENST00000589545 NRAPQ86VF7 1730 aa24.92■■□□□ 1.58
HPS5-211ENST00000589545 KTN1Q86UP2 1357 aaKnown RBP24.92■■□□□ 1.58
HPS5-211ENST00000589545 BCL9LQ86UU0 1499 aa24.91■■□□□ 1.58
HPS5-211ENST00000589545 HAP1P54257 671 aaPredicted RBP24.91■■□□□ 1.58
HPS5-211ENST00000589545 SLIT2O94813 1529 aa24.91■■□□□ 1.58
HPS5-211ENST00000589545 TTC21BQ7Z4L5 1316 aa24.9■■□□□ 1.58
HPS5-211ENST00000589545 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.9■■□□□ 1.58
HPS5-211ENST00000589545 TMF1P82094 1093 aa24.9■■□□□ 1.58
HPS5-211ENST00000589545 ABTB2Q8N961 1025 aa24.9■■□□□ 1.58
HPS5-211ENST00000589545 ZRANB1Q9UGI0 708 aa24.9■■□□□ 1.58
HPS5-211ENST00000589545 USP19O94966 1318 aa24.89■■□□□ 1.58
HPS5-211ENST00000589545 SLIT3O75094 1523 aa24.88■■□□□ 1.57
HPS5-211ENST00000589545 EIF4G2P78344 907 aaKnown RBP eCLIP24.88■■□□□ 1.57
HPS5-211ENST00000589545 FNBP4Q8N3X1 1017 aaPredicted RBP24.88■■□□□ 1.57
HPS5-211ENST00000589545 COL14A1Q05707 1796 aaKnown RBP24.88■■□□□ 1.57
HPS5-211ENST00000589545 NWD2Q9ULI1 1742 aa24.87■■□□□ 1.57
HPS5-211ENST00000589545 FAM83GA6ND36 823 aa24.86■■□□□ 1.57
HPS5-211ENST00000589545 ZNF772Q68DY9 489 aaPredicted RBP24.86■■□□□ 1.57
HPS5-211ENST00000589545 PUS7Q96PZ0 661 aaKnown RBP24.86■■□□□ 1.57
HPS5-211ENST00000589545 USP21Q9UK80 565 aa24.86■■□□□ 1.57
HPS5-211ENST00000589545 ATRNO75882 1429 aa24.86■■□□□ 1.57
HPS5-211ENST00000589545 USP54Q70EL1 1684 aa24.85■■□□□ 1.57
HPS5-211ENST00000589545 KIAA0232Q92628 1395 aa24.85■■□□□ 1.57
HPS5-211ENST00000589545 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.85■■□□□ 1.57
HPS5-211ENST00000589545 BRD4O60885 1362 aaPredicted RBP24.84■■□□□ 1.57
HPS5-211ENST00000589545 C11orf95C9JLR9 678 aaPredicted RBP24.84■■□□□ 1.57
HPS5-211ENST00000589545 NME9Q86XW9 330 aa24.84■■□□□ 1.57
HPS5-211ENST00000589545 ZC3H6P61129 1189 aaKnown RBP24.83■■□□□ 1.57
HPS5-211ENST00000589545 CHRNA2Q15822 529 aa24.83■■□□□ 1.57
HPS5-211ENST00000589545 GLI3P10071 1580 aa24.83■■□□□ 1.57
HPS5-211ENST00000589545 LMO7Q8WWI1 1683 aa24.82■■□□□ 1.56
HPS5-211ENST00000589545 NLRP6P59044 892 aa24.82■■□□□ 1.56
HPS5-211ENST00000589545 EDC4Q6P2E9 1401 aaKnown RBP24.82■■□□□ 1.56
HPS5-211ENST00000589545 ZNF692Q9BU19 519 aaPredicted RBP24.82■■□□□ 1.56
HPS5-211ENST00000589545 QTRT2Q9H974 415 aaKnown RBP24.81■■□□□ 1.56
HPS5-211ENST00000589545 NFAT5O94916 1531 aa24.81■■□□□ 1.56
HPS5-211ENST00000589545 NINLQ9Y2I6 1382 aa24.8■■□□□ 1.56
HPS5-211ENST00000589545 HDGFL2Q7Z4V5 671 aaPredicted RBP24.8■■□□□ 1.56
HPS5-211ENST00000589545 POLR3GLQ9BT43 218 aa24.8■■□□□ 1.56
HPS5-211ENST00000589545 ANKRD36BQ8N2N9 1353 aa24.8■■□□□ 1.56
HPS5-211ENST00000589545 RGS12O14924 1447 aa24.79■■□□□ 1.56
HPS5-211ENST00000589545 NLRP13Q86W25 1043 aa24.79■■□□□ 1.56
HPS5-211ENST00000589545 TTC21AQ8NDW8 1320 aa24.79■■□□□ 1.56
HPS5-211ENST00000589545 COL18A1P39060 1754 aa24.78■■□□□ 1.56
HPS5-211ENST00000589545 SOX12O15370 315 aa24.78■■□□□ 1.56
HPS5-211ENST00000589545 PRDM11Q9NQV5 511 aa24.78■■□□□ 1.56
HPS5-211ENST00000589545 TERF2IPQ9NYB0 399 aa24.78■■□□□ 1.56
HPS5-211ENST00000589545 KIF20BQ96Q89 1820 aa24.77■■□□□ 1.56
HPS5-211ENST00000589545 GCP02774 474 aa24.77■■□□□ 1.56
HPS5-211ENST00000589545 CAMTA1Q9Y6Y1 1673 aa24.77■■□□□ 1.56
HPS5-211ENST00000589545 RGPD5Q99666 1765 aa24.77■■□□□ 1.56
HPS5-211ENST00000589545 UNC5CLQ8IV45 518 aa24.76■■□□□ 1.55
HPS5-211ENST00000589545 BTG4Q9NY30 223 aa24.76■■□□□ 1.55
HPS5-211ENST00000589545 OVOS2A0A0J9YW53 1432 aa24.76■■□□□ 1.55
HPS5-211ENST00000589545 OVOS2Q6IE36 1432 aa24.76■■□□□ 1.55
HPS5-211ENST00000589545 ZBTB7CA1YPR0 619 aa24.74■■□□□ 1.55
HPS5-211ENST00000589545 SLC24A1O60721 1099 aa24.74■■□□□ 1.55
HPS5-211ENST00000589545 RXRBP28702 533 aa24.74■■□□□ 1.55
HPS5-211ENST00000589545 TRPC5Q9UL62 973 aaPredicted RBP24.74■■□□□ 1.55
HPS5-211ENST00000589545 CPDO75976 1380 aa24.74■■□□□ 1.55
HPS5-211ENST00000589545 USP31Q70CQ4 1352 aa24.74■■□□□ 1.55
HPS5-211ENST00000589545 LTN1O94822 1766 aa24.74■■□□□ 1.55
HPS5-211ENST00000589545 CARD14Q9BXL6 1004 aa24.73■■□□□ 1.55
HPS5-211ENST00000589545 CDCA8Q53HL2 280 aa24.72■■□□□ 1.55
HPS5-211ENST00000589545 NSD3Q9BZ95 1437 aa24.71■■□□□ 1.55
HPS5-211ENST00000589545 RBM6P78332 1123 aaKnown RBP24.71■■□□□ 1.55
HPS5-211ENST00000589545 CDK12Q9NYV4 1490 aaPredicted RBP24.7■■□□□ 1.54
HPS5-211ENST00000589545 BRWD3Q6RI45 1802 aa24.69■■□□□ 1.54
HPS5-211ENST00000589545 KIF7Q2M1P5 1343 aa24.68■■□□□ 1.54
HPS5-211ENST00000589545 GJD4Q96KN9 370 aaPredicted RBP24.68■■□□□ 1.54
HPS5-211ENST00000589545 SOCS7O14512 581 aa24.67■■□□□ 1.54
HPS5-211ENST00000589545 FBLN1P23142 703 aa24.67■■□□□ 1.54
HPS5-211ENST00000589545 VPS72Q15906 364 aa24.67■■□□□ 1.54
HPS5-211ENST00000589545 STRN4Q9NRL3 753 aa24.67■■□□□ 1.54
HPS5-211ENST00000589545 COL5A2P05997 1499 aaPredicted RBP24.66■■□□□ 1.54
HPS5-211ENST00000589545 GGNBP2Q9H3C7 697 aa24.66■■□□□ 1.54
HPS5-211ENST00000589545 CCDC9Q9Y3X0 531 aaKnown RBP24.65■■□□□ 1.54
HPS5-211ENST00000589545 ARHGEF25Q86VW2 580 aa24.64■■□□□ 1.54
HPS5-211ENST00000589545 AXIN2Q9Y2T1 843 aa24.64■■□□□ 1.54
HPS5-211ENST00000589545 FYB1O15117 783 aa24.63■■□□□ 1.53
HPS5-211ENST00000589545 AATKQ6ZMQ8 1374 aa24.63■■□□□ 1.53
HPS5-211ENST00000589545 LARP1Q6PKG0 1096 aaKnown RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms