RNA–Protein interactions for RNA: ENST00000589300.1

LINC00479-204, long intergenic non-protein coding RNA 479, humanhuman

TSL 1 (best) BASIC

Gene LINC00479, Length 718 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479-204ENST00000589300 SIN3AQ96ST3 1273 aa21.28■■□□□ 1
LINC00479-204ENST00000589300 COL14A1Q05707 1796 aaKnown RBP21.28■■□□□ 1
LINC00479-204ENST00000589300 FAM83GA6ND36 823 aa21.27■■□□□ 1
LINC00479-204ENST00000589300 POLR3AO14802 1390 aaPredicted RBP21.26■□□□□ 0.99
LINC00479-204ENST00000589300 VPS72Q15906 364 aa21.26■□□□□ 0.99
LINC00479-204ENST00000589300 CENPJQ9HC77 1338 aaPredicted RBP21.26■□□□□ 0.99
LINC00479-204ENST00000589300 PAK3O75914 559 aaPredicted RBP21.25■□□□□ 0.99
LINC00479-204ENST00000589300 CCDC61Q9Y6R9 512 aa21.25■□□□□ 0.99
LINC00479-204ENST00000589300 PHRF1Q9P1Y6 1649 aaKnown RBP21.25■□□□□ 0.99
LINC00479-204ENST00000589300 PLEKHG3A1L390 1219 aa21.23■□□□□ 0.99
LINC00479-204ENST00000589300 ACEP12821 1306 aa21.23■□□□□ 0.99
LINC00479-204ENST00000589300 NEUROD1Q13562 356 aa21.21■□□□□ 0.99
LINC00479-204ENST00000589300 NBPF8Q3BBV2 869 aa21.21■□□□□ 0.99
LINC00479-204ENST00000589300 BTG4Q9NY30 223 aa21.2■□□□□ 0.98
LINC00479-204ENST00000589300 ONECUT3O60422 494 aaPredicted RBP21.19■□□□□ 0.98
LINC00479-204ENST00000589300 CCDC9Q9Y3X0 531 aaKnown RBP21.19■□□□□ 0.98
LINC00479-204ENST00000589300 PPIP5K1Q6PFW1 1433 aa21.19■□□□□ 0.98
LINC00479-204ENST00000589300 SRPK2P78362 688 aaKnown RBP21.18■□□□□ 0.98
LINC00479-204ENST00000589300 SEPT12Q8IYM1 358 aa21.18■□□□□ 0.98
LINC00479-204ENST00000589300 SRCAPQ6ZRS2 3230 aa21.17■□□□□ 0.98
LINC00479-204ENST00000589300 CABP2Q9NPB3 220 aa21.17■□□□□ 0.98
LINC00479-204ENST00000589300 CCDC125Q86Z20 511 aa21.16■□□□□ 0.98
LINC00479-204ENST00000589300 NRKQ7Z2Y5 1582 aa21.15■□□□□ 0.98
LINC00479-204ENST00000589300 ROCK2O75116 1388 aaKnown RBP21.15■□□□□ 0.98
LINC00479-204ENST00000589300 KIAA0232Q92628 1395 aa21.15■□□□□ 0.98
LINC00479-204ENST00000589300 PRDM11Q9NQV5 511 aa21.15■□□□□ 0.98
LINC00479-204ENST00000589300 NUTM2GQ5VZR2 741 aa21.14■□□□□ 0.97
LINC00479-204ENST00000589300 SPATA31A5Q5VU36 1347 aa21.12■□□□□ 0.97
LINC00479-204ENST00000589300 SPATA31A7Q8IWB4 1347 aa21.12■□□□□ 0.97
LINC00479-204ENST00000589300 BLMP54132 1417 aaPredicted RBP21.12■□□□□ 0.97
LINC00479-204ENST00000589300 USP19O94966 1318 aa21.11■□□□□ 0.97
LINC00479-204ENST00000589300 ABTB2Q8N961 1025 aa21.11■□□□□ 0.97
LINC00479-204ENST00000589300 THSD7AQ9UPZ6 1657 aa21.11■□□□□ 0.97
LINC00479-204ENST00000589300 BRD4O60885 1362 aaPredicted RBP21.1■□□□□ 0.97
LINC00479-204ENST00000589300 EVC2Q86UK5 1308 aa21.1■□□□□ 0.97
LINC00479-204ENST00000589300 ZC3H6P61129 1189 aaKnown RBP21.1■□□□□ 0.97
LINC00479-204ENST00000589300 CHRNA2Q15822 529 aa21.1■□□□□ 0.97
LINC00479-204ENST00000589300 FAM98CQ17RN3 349 aaKnown RBP21.1■□□□□ 0.97
LINC00479-204ENST00000589300 KRT27Q7Z3Y8 459 aa21.1■□□□□ 0.97
LINC00479-204ENST00000589300 USP6P35125 1406 aa21.1■□□□□ 0.97
LINC00479-204ENST00000589300 CABP1Q9NZU7 370 aa21.09■□□□□ 0.97
LINC00479-204ENST00000589300 LMO7Q8WWI1 1683 aa21.09■□□□□ 0.97
LINC00479-204ENST00000589300 AKAP12Q02952 1782 aa21.08■□□□□ 0.97
LINC00479-204ENST00000589300 CPDO75976 1380 aa21.08■□□□□ 0.96
LINC00479-204ENST00000589300 A0A0G2JS52 829 aa21.07■□□□□ 0.96
LINC00479-204ENST00000589300 MYT1Q01538 1121 aa21.07■□□□□ 0.96
LINC00479-204ENST00000589300 PIK3C2AO00443 1686 aa21.06■□□□□ 0.96
LINC00479-204ENST00000589300 CAMTA1Q9Y6Y1 1673 aa21.06■□□□□ 0.96
LINC00479-204ENST00000589300 SSH2Q76I76 1423 aa21.06■□□□□ 0.96
LINC00479-204ENST00000589300 NLRP13Q86W25 1043 aa21.06■□□□□ 0.96
LINC00479-204ENST00000589300 SPATA31A1Q5TZJ5 1347 aa21.05■□□□□ 0.96
LINC00479-204ENST00000589300 STRN4Q9NRL3 753 aa21.04■□□□□ 0.96
LINC00479-204ENST00000589300 SLIT3O75094 1523 aa21.04■□□□□ 0.96
LINC00479-204ENST00000589300 TONSLQ96HA7 1378 aa21.03■□□□□ 0.96
LINC00479-204ENST00000589300 SBNO2Q9Y2G9 1366 aa21.03■□□□□ 0.96
LINC00479-204ENST00000589300 GCP02774 474 aa21.03■□□□□ 0.96
LINC00479-204ENST00000589300 TRIM26Q12899 539 aaPredicted RBP21.02■□□□□ 0.96
LINC00479-204ENST00000589300 DEFB132Q7Z7B7 95 aa21.01■□□□□ 0.95
LINC00479-204ENST00000589300 RGPD1P0DJD0 1748 aa21.01■□□□□ 0.95
LINC00479-204ENST00000589300 SF3B2Q13435 895 aaKnown RBP21■□□□□ 0.95
LINC00479-204ENST00000589300 CARD11Q9BXL7 1154 aa21■□□□□ 0.95
LINC00479-204ENST00000589300 ZRANB1Q9UGI0 708 aa21■□□□□ 0.95
LINC00479-204ENST00000589300 MON2Q7Z3U7 1717 aa20.99■□□□□ 0.95
LINC00479-204ENST00000589300 EVA1CP58658 441 aa20.99■□□□□ 0.95
LINC00479-204ENST00000589300 NLRP6P59044 892 aa20.99■□□□□ 0.95
LINC00479-204ENST00000589300 CPSF1Q10570 1443 aaKnown RBP20.98■□□□□ 0.95
LINC00479-204ENST00000589300 ZNF692Q9BU19 519 aaPredicted RBP20.98■□□□□ 0.95
LINC00479-204ENST00000589300 COL5A2P05997 1499 aaPredicted RBP20.98■□□□□ 0.95
LINC00479-204ENST00000589300 COL18A1P39060 1754 aa20.97■□□□□ 0.95
LINC00479-204ENST00000589300 FAM182BQ5T319 152 aa20.97■□□□□ 0.95
LINC00479-204ENST00000589300 LARP1Q6PKG0 1096 aaKnown RBP20.97■□□□□ 0.95
LINC00479-204ENST00000589300 TNS1Q9HBL0 1735 aaKnown RBP20.97■□□□□ 0.95
LINC00479-204ENST00000589300 BARGINQ6ZT62 677 aa20.96■□□□□ 0.95
LINC00479-204ENST00000589300 TTC21BQ7Z4L5 1316 aa20.96■□□□□ 0.95
LINC00479-204ENST00000589300 USP35Q9P2H5 1018 aa20.95■□□□□ 0.94
LINC00479-204ENST00000589300 AATKQ6ZMQ8 1374 aa20.95■□□□□ 0.94
LINC00479-204ENST00000589300 TTC21AQ8NDW8 1320 aa20.94■□□□□ 0.94
LINC00479-204ENST00000589300 PARP4Q9UKK3 1724 aaKnown RBP20.93■□□□□ 0.94
LINC00479-204ENST00000589300 TCP11L2Q8N4U5 519 aa20.93■□□□□ 0.94
LINC00479-204ENST00000589300 KTN1Q86UP2 1357 aaKnown RBP20.93■□□□□ 0.94
LINC00479-204ENST00000589300 RGPD5Q99666 1765 aa20.92■□□□□ 0.94
LINC00479-204ENST00000589300 CD163L1Q9NR16 1453 aa20.92■□□□□ 0.94
LINC00479-204ENST00000589300 USP54Q70EL1 1684 aa20.92■□□□□ 0.94
LINC00479-204ENST00000589300 BAG6P46379 1132 aa20.91■□□□□ 0.94
LINC00479-204ENST00000589300 CRB1P82279 1406 aa20.91■□□□□ 0.94
LINC00479-204ENST00000589300 THRAP3Q9Y2W1 955 aaKnown RBP20.91■□□□□ 0.94
LINC00479-204ENST00000589300 NFAT5O94916 1531 aa20.9■□□□□ 0.94
LINC00479-204ENST00000589300 DISP2A7MBM2 1401 aa20.9■□□□□ 0.94
LINC00479-204ENST00000589300 ZBTB7CA1YPR0 619 aa20.9■□□□□ 0.94
LINC00479-204ENST00000589300 WNK3Q9BYP7 1800 aa20.89■□□□□ 0.93
LINC00479-204ENST00000589300 FAM196AQ6ZSG2 479 aa20.88■□□□□ 0.93
LINC00479-204ENST00000589300 ARHGEF25Q86VW2 580 aa20.88■□□□□ 0.93
LINC00479-204ENST00000589300 KCNH5Q8NCM2 988 aa20.88■□□□□ 0.93
LINC00479-204ENST00000589300 AXIN2Q9Y2T1 843 aa20.87■□□□□ 0.93
LINC00479-204ENST00000589300 EN1Q05925 392 aaPredicted RBP20.86■□□□□ 0.93
LINC00479-204ENST00000589300 PDE3BQ13370 1112 aa20.86■□□□□ 0.93
LINC00479-204ENST00000589300 PUS7Q96PZ0 661 aaKnown RBP20.86■□□□□ 0.93
LINC00479-204ENST00000589300 LRRC37A3O60309 1634 aa20.86■□□□□ 0.93
LINC00479-204ENST00000589300 USP31Q70CQ4 1352 aa20.85■□□□□ 0.93
LINC00479-204ENST00000589300 TMC1Q8TDI8 760 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms