RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 F12P00748 615 aaPredicted RBP6.03□□□□□ -1.44
ZNF540-207ENST00000589285 MSS51Q4VC12 460 aa6.03□□□□□ -1.44
ZNF540-207ENST00000589285 EVA1BQ9NVM1 165 aa6.03□□□□□ -1.44
ZNF540-207ENST00000589285 TRIM67Q6ZTA4 783 aa6.02□□□□□ -1.45
ZNF540-207ENST00000589285 OCSTAMPQ9BR26 566 aa6.02□□□□□ -1.45
ZNF540-207ENST00000589285 TLL2Q9Y6L7 1015 aa6.02□□□□□ -1.45
ZNF540-207ENST00000589285 RAB15P59190 212 aa6.02□□□□□ -1.45
ZNF540-207ENST00000589285 SPDYE5A6NIY4 337 aa6.01□□□□□ -1.45
ZNF540-207ENST00000589285 POM121CA8CG34 1229 aa6.01□□□□□ -1.45
ZNF540-207ENST00000589285 GJA5P36382 358 aa6.01□□□□□ -1.45
ZNF540-207ENST00000589285 SLC19A1P41440 591 aa6.01□□□□□ -1.45
ZNF540-207ENST00000589285 SH3BP2P78314 561 aa6.01□□□□□ -1.45
ZNF540-207ENST00000589285 AGERQ15109 404 aa6.01□□□□□ -1.45
ZNF540-207ENST00000589285 VAC14Q08AM6 782 aa6.01□□□□□ -1.45
ZNF540-207ENST00000589285 PTPRNQ16849 979 aa6.01□□□□□ -1.45
ZNF540-207ENST00000589285 ANKLE1Q8NAG6 615 aa6□□□□□ -1.45
ZNF540-207ENST00000589285 SUPT5HO00267 1087 aaKnown RBP5.99□□□□□ -1.45
ZNF540-207ENST00000589285 KCNH2Q12809 1159 aa5.99□□□□□ -1.45
ZNF540-207ENST00000589285 ARID5BQ14865 1188 aa5.99□□□□□ -1.45
ZNF540-207ENST00000589285 COG6Q9Y2V7 657 aa5.99□□□□□ -1.45
ZNF540-207ENST00000589285 FBXO45P0C2W1 286 aa5.99□□□□□ -1.45
ZNF540-207ENST00000589285 IRF5Q13568 498 aa5.99□□□□□ -1.45
ZNF540-207ENST00000589285 ZNF697Q5TEC3 545 aa5.99□□□□□ -1.45
ZNF540-207ENST00000589285 SPRYD7Q5W111 196 aa5.99□□□□□ -1.45
ZNF540-207ENST00000589285 MRGPRX2Q96LB1 330 aa5.99□□□□□ -1.45
ZNF540-207ENST00000589285 ZNF511Q8NB15 262 aa5.97□□□□□ -1.45
ZNF540-207ENST00000589285 J3QL48 77 aa5.97□□□□□ -1.45
ZNF540-207ENST00000589285 ZBTB24O43167 697 aaPredicted RBP5.97□□□□□ -1.45
ZNF540-207ENST00000589285 UBTFP17480 764 aaKnown RBP5.97□□□□□ -1.45
ZNF540-207ENST00000589285 TUSC1Q2TAM9 212 aa5.97□□□□□ -1.45
ZNF540-207ENST00000589285 DESI1Q6ICB0 168 aa5.97□□□□□ -1.45
ZNF540-207ENST00000589285 BICRAQ9NZM4 1560 aa5.97□□□□□ -1.45
ZNF540-207ENST00000589285 TSGA10IPQ3SY00 556 aa5.96□□□□□ -1.46
ZNF540-207ENST00000589285 FKBPLQ9UIM3 349 aa5.96□□□□□ -1.46
ZNF540-207ENST00000589285 ZNF777Q9ULD5 760 aaPredicted RBP5.96□□□□□ -1.46
ZNF540-207ENST00000589285 ADAMTS19Q8TE59 1207 aa5.96□□□□□ -1.46
ZNF540-207ENST00000589285 GGCXP38435 758 aa5.95□□□□□ -1.46
ZNF540-207ENST00000589285 RC3H1Q5TC82 1133 aaKnown RBP5.95□□□□□ -1.46
ZNF540-207ENST00000589285 PKD2L1Q9P0L9 805 aa5.95□□□□□ -1.46
ZNF540-207ENST00000589285 TMEM259Q4ZIN3 620 aa5.95□□□□□ -1.46
ZNF540-207ENST00000589285 EHBP1Q8NDI1 1231 aa5.95□□□□□ -1.46
ZNF540-207ENST00000589285 ADAM32Q8TC27 787 aa5.95□□□□□ -1.46
ZNF540-207ENST00000589285 STAU1O95793 577 aaKnown RBP5.94□□□□□ -1.46
ZNF540-207ENST00000589285 C1orf115Q9H7X2 142 aa5.94□□□□□ -1.46
ZNF540-207ENST00000589285 PIK3CDO00329 1044 aa5.93□□□□□ -1.46
ZNF540-207ENST00000589285 LCE2BO14633 110 aa5.93□□□□□ -1.46
ZNF540-207ENST00000589285 ALDH1A1P00352 501 aa5.93□□□□□ -1.46
ZNF540-207ENST00000589285 ERFEQ4G0M1 354 aa5.93□□□□□ -1.46
ZNF540-207ENST00000589285 C14orf37Q86TY3 774 aa5.93□□□□□ -1.46
ZNF540-207ENST00000589285 NR3C2P08235 984 aa5.92□□□□□ -1.46
ZNF540-207ENST00000589285 PDZRN3Q9UPQ7 1066 aa5.92□□□□□ -1.46
ZNF540-207ENST00000589285 GDF9O60383 454 aa5.92□□□□□ -1.46
ZNF540-207ENST00000589285 ARID3AQ99856 593 aa5.92□□□□□ -1.46
ZNF540-207ENST00000589285 ST8SIA5O15466 376 aa5.91□□□□□ -1.46
ZNF540-207ENST00000589285 IFFO2Q5TF58 517 aa5.91□□□□□ -1.46
ZNF540-207ENST00000589285 SH3RF1Q7Z6J0 888 aa5.91□□□□□ -1.46
ZNF540-207ENST00000589285 IRX2Q9BZI1 471 aaPredicted RBP5.91□□□□□ -1.46
ZNF540-207ENST00000589285 DACH1Q9UI36 760 aa5.91□□□□□ -1.46
ZNF540-207ENST00000589285 SH3BP5LQ7L8J4 393 aa5.9□□□□□ -1.46
ZNF540-207ENST00000589285 ZNF598Q86UK7 904 aaKnown RBP5.9□□□□□ -1.46
ZNF540-207ENST00000589285 DEPDC4Q8N2C3 294 aa5.9□□□□□ -1.46
ZNF540-207ENST00000589285 ARHGAP9Q9BRR9 750 aa5.9□□□□□ -1.46
ZNF540-207ENST00000589285 CD2BP2O95400 341 aaKnown RBP5.9□□□□□ -1.46
ZNF540-207ENST00000589285 FSHRP23945 695 aa5.9□□□□□ -1.46
ZNF540-207ENST00000589285 HPS1Q92902 700 aa5.9□□□□□ -1.47
ZNF540-207ENST00000589285 TMPRSS4Q9NRS4 437 aa5.9□□□□□ -1.47
ZNF540-207ENST00000589285 PCDHB9Q9Y5E1 797 aa5.9□□□□□ -1.47
ZNF540-207ENST00000589285 NDUFB9Q9Y6M9 179 aa5.9□□□□□ -1.47
ZNF540-207ENST00000589285 LGR5O75473 907 aa5.89□□□□□ -1.47
ZNF540-207ENST00000589285 BMP1P13497 986 aa5.89□□□□□ -1.47
ZNF540-207ENST00000589285 SIAH2O43255 324 aa5.89□□□□□ -1.47
ZNF540-207ENST00000589285 GFRA3O60609 400 aa5.89□□□□□ -1.47
ZNF540-207ENST00000589285 ZBTB33Q86T24 672 aa5.89□□□□□ -1.47
ZNF540-207ENST00000589285 ZCCHC6Q5VYS8 1495 aaKnown RBP5.89□□□□□ -1.47
ZNF540-207ENST00000589285 BANK1Q8NDB2 785 aa5.88□□□□□ -1.47
ZNF540-207ENST00000589285 FAM187AA6NFU0 413 aa5.88□□□□□ -1.47
ZNF540-207ENST00000589285 GRM5P41594 1212 aa5.88□□□□□ -1.47
ZNF540-207ENST00000589285 SCTRP47872 440 aa5.88□□□□□ -1.47
ZNF540-207ENST00000589285 Q6ZNB5 142 aa5.88□□□□□ -1.47
ZNF540-207ENST00000589285 ZFAND3Q9H8U3 227 aa5.88□□□□□ -1.47
ZNF540-207ENST00000589285 ZNF330Q9Y3S2 320 aaPredicted RBP5.88□□□□□ -1.47
ZNF540-207ENST00000589285 TTC24A2A3L6 582 aaPredicted RBP5.88□□□□□ -1.47
ZNF540-207ENST00000589285 GIGYF1O75420 1035 aaPredicted RBP5.88□□□□□ -1.47
ZNF540-207ENST00000589285 FNBP4Q8N3X1 1017 aaPredicted RBP5.88□□□□□ -1.47
ZNF540-207ENST00000589285 CDCA7Q9BWT1 371 aaPredicted RBP5.88□□□□□ -1.47
ZNF540-207ENST00000589285 ITPKCQ96DU7 683 aa5.87□□□□□ -1.47
ZNF540-207ENST00000589285 ZBBXA8MT70 800 aa5.87□□□□□ -1.47
ZNF540-207ENST00000589285 BPHLQ86WA6 291 aaPredicted RBP5.87□□□□□ -1.47
ZNF540-207ENST00000589285 FAM174AQ8TBP5 190 aa5.87□□□□□ -1.47
ZNF540-207ENST00000589285 APBB1O00213 710 aa5.86□□□□□ -1.47
ZNF540-207ENST00000589285 RFX1P22670 979 aa5.86□□□□□ -1.47
ZNF540-207ENST00000589285 CBLBQ13191 982 aa5.86□□□□□ -1.47
ZNF540-207ENST00000589285 CDCA8Q53HL2 280 aa5.86□□□□□ -1.47
ZNF540-207ENST00000589285 PROSER2Q86WR7 435 aaPredicted RBP5.86□□□□□ -1.47
ZNF540-207ENST00000589285 GAS2L2Q8NHY3 880 aa5.86□□□□□ -1.47
ZNF540-207ENST00000589285 UCN2Q96RP3 112 aa5.86□□□□□ -1.47
ZNF540-207ENST00000589285 POTECB2RU33 542 aa5.86□□□□□ -1.47
ZNF540-207ENST00000589285 RAD21O60216 631 aa5.86□□□□□ -1.47
ZNF540-207ENST00000589285 HDGFL1Q5TGJ6 251 aa5.86□□□□□ -1.47
ZNF540-207ENST00000589285 SMPD1P17405 629 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms