RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 NRKQ7Z2Y5 1582 aa33.64■■■□□ 2.98
RFX1-205ENST00000589239 TTC21BQ7Z4L5 1316 aa33.64■■■□□ 2.98
RFX1-205ENST00000589239 SSH2Q76I76 1423 aa33.63■■■□□ 2.97
RFX1-205ENST00000589239 PSME1Q06323 249 aa33.62■■■□□ 2.97
RFX1-205ENST00000589239 NME9Q86XW9 330 aa33.62■■■□□ 2.97
RFX1-205ENST00000589239 NSD2O96028 1365 aa33.62■■■□□ 2.97
RFX1-205ENST00000589239 KIF1AQ12756 1690 aa33.61■■■□□ 2.97
RFX1-205ENST00000589239 BRINP3Q76B58 766 aa33.61■■■□□ 2.97
RFX1-205ENST00000589239 XPCQ01831 940 aaPredicted RBP33.59■■■□□ 2.97
RFX1-205ENST00000589239 MORC1Q86VD1 984 aa33.58■■■□□ 2.97
RFX1-205ENST00000589239 DDX17Q92841 729 aaKnown RBP33.57■■■□□ 2.96
RFX1-205ENST00000589239 ZRANB1Q9UGI0 708 aa33.57■■■□□ 2.96
RFX1-205ENST00000589239 KIF20BQ96Q89 1820 aa33.57■■■□□ 2.96
RFX1-205ENST00000589239 MYBBP1AQ9BQG0 1328 aaKnown RBP33.56■■■□□ 2.96
RFX1-205ENST00000589239 PAK3O75914 559 aaPredicted RBP33.55■■■□□ 2.96
RFX1-205ENST00000589239 TTC21AQ8NDW8 1320 aa33.54■■■□□ 2.96
RFX1-205ENST00000589239 TNNT2P45379 298 aaPredicted RBP33.54■■■□□ 2.96
RFX1-205ENST00000589239 CCER2I3L3R5 266 aa33.53■■■□□ 2.96
RFX1-205ENST00000589239 KRT28Q7Z3Y7 464 aa33.52■■■□□ 2.96
RFX1-205ENST00000589239 CCDC184Q52MB2 194 aa33.52■■■□□ 2.96
RFX1-205ENST00000589239 BRD4O60885 1362 aaPredicted RBP33.5■■■□□ 2.95
RFX1-205ENST00000589239 NPHP3Q7Z494 1330 aa33.5■■■□□ 2.95
RFX1-205ENST00000589239 PPP2R1AP30153 589 aa33.5■■■□□ 2.95
RFX1-205ENST00000589239 ANKRD26Q9UPS8 1709 aa33.49■■■□□ 2.95
RFX1-205ENST00000589239 COG3Q96JB2 828 aa33.49■■■□□ 2.95
RFX1-205ENST00000589239 ABTB2Q8N961 1025 aa33.47■■■□□ 2.95
RFX1-205ENST00000589239 PIK3C2AO00443 1686 aa33.46■■■□□ 2.95
RFX1-205ENST00000589239 NLRP13Q86W25 1043 aa33.46■■■□□ 2.95
RFX1-205ENST00000589239 NUTM2GQ5VZR2 741 aa33.45■■■□□ 2.95
RFX1-205ENST00000589239 OVOS2A0A0J9YW53 1432 aa33.45■■■□□ 2.94
RFX1-205ENST00000589239 OVOS2Q6IE36 1432 aa33.45■■■□□ 2.94
RFX1-205ENST00000589239 MRS2Q9HD23 443 aa33.44■■■□□ 2.94
RFX1-205ENST00000589239 NLRP6P59044 892 aa33.43■■■□□ 2.94
RFX1-205ENST00000589239 CERKQ8TCT0 537 aa33.43■■■□□ 2.94
RFX1-205ENST00000589239 TRPM3Q9HCF6 1732 aaPredicted RBP33.43■■■□□ 2.94
RFX1-205ENST00000589239 PXDNQ92626 1479 aa33.42■■■□□ 2.94
RFX1-205ENST00000589239 TOM1O60784 492 aa33.42■■■□□ 2.94
RFX1-205ENST00000589239 USP31Q70CQ4 1352 aa33.42■■■□□ 2.94
RFX1-205ENST00000589239 FBLN1P23142 703 aa33.41■■■□□ 2.94
RFX1-205ENST00000589239 LMOD2Q6P5Q4 547 aa33.4■■■□□ 2.94
RFX1-205ENST00000589239 IQSEC2Q5JU85 1478 aa33.4■■■□□ 2.94
RFX1-205ENST00000589239 ROBO1Q9Y6N7 1651 aa33.4■■■□□ 2.94
RFX1-205ENST00000589239 UBAP1LF5GYI3 381 aa33.38■■■□□ 2.93
RFX1-205ENST00000589239 SBNO1A3KN83 1393 aa33.37■■■□□ 2.93
RFX1-205ENST00000589239 SOS2Q07890 1332 aaPredicted RBP33.37■■■□□ 2.93
RFX1-205ENST00000589239 PIP4K2BP78356 416 aa33.36■■■□□ 2.93
RFX1-205ENST00000589239 SOX12O15370 315 aa33.35■■■□□ 2.93
RFX1-205ENST00000589239 NHSL1Q5SYE7 1610 aa33.34■■■□□ 2.93
RFX1-205ENST00000589239 MTHFSP49914 203 aa33.34■■■□□ 2.93
RFX1-205ENST00000589239 MARF1Q9Y4F3 1742 aaKnown RBP33.33■■■□□ 2.93
RFX1-205ENST00000589239 TNS3Q68CZ2 1445 aa33.33■■■□□ 2.93
RFX1-205ENST00000589239 SPATA31A3Q5VYP0 1347 aa33.32■■■□□ 2.92
RFX1-205ENST00000589239 ALS2Q96Q42 1657 aa33.32■■■□□ 2.92
RFX1-205ENST00000589239 PLEKHG5O94827 1062 aa33.31■■■□□ 2.92
RFX1-205ENST00000589239 AATKQ6ZMQ8 1374 aa33.3■■■□□ 2.92
RFX1-205ENST00000589239 USP54Q70EL1 1684 aa33.3■■■□□ 2.92
RFX1-205ENST00000589239 RRS1Q15050 365 aaKnown RBP33.29■■■□□ 2.92
RFX1-205ENST00000589239 POLKQ9UBT6 870 aa33.29■■■□□ 2.92
RFX1-205ENST00000589239 EMILIN1Q9Y6C2 1016 aa33.27■■■□□ 2.92
RFX1-205ENST00000589239 PPM1GO15355 546 aaPredicted RBP33.25■■■□□ 2.91
RFX1-205ENST00000589239 AHDC1Q5TGY3 1603 aaPredicted RBP33.25■■■□□ 2.91
RFX1-205ENST00000589239 MAP2P11137 1827 aaKnown RBP33.24■■■□□ 2.91
RFX1-205ENST00000589239 ARHGEF10O15013 1369 aa33.24■■■□□ 2.91
RFX1-205ENST00000589239 FAM9BQ8IZU0 186 aa33.23■■■□□ 2.91
RFX1-205ENST00000589239 PNISRQ8TF01 805 aaKnown RBP33.23■■■□□ 2.91
RFX1-205ENST00000589239 USP19O94966 1318 aa33.23■■■□□ 2.91
RFX1-205ENST00000589239 SMG6Q86US8 1419 aaKnown RBP33.2■■■□□ 2.91
RFX1-205ENST00000589239 MED1Q15648 1581 aaPredicted RBP33.19■■■□□ 2.9
RFX1-205ENST00000589239 SLIT3O75094 1523 aa33.19■■■□□ 2.9
RFX1-205ENST00000589239 GCP02774 474 aa33.19■■■□□ 2.9
RFX1-205ENST00000589239 KCNH5Q8NCM2 988 aa33.19■■■□□ 2.9
RFX1-205ENST00000589239 MAP3K19Q56UN5 1328 aa33.19■■■□□ 2.9
RFX1-205ENST00000589239 CABLES1Q8TDN4 633 aa33.19■■■□□ 2.9
RFX1-205ENST00000589239 CFAP53Q96M91 514 aa33.19■■■□□ 2.9
RFX1-205ENST00000589239 NFAT5O94916 1531 aa33.17■■■□□ 2.9
RFX1-205ENST00000589239 LRRC59Q96AG4 307 aaKnown RBP33.16■■■□□ 2.9
RFX1-205ENST00000589239 PNPLA6Q8IY17 1366 aa33.16■■■□□ 2.9
RFX1-205ENST00000589239 PHLPP1O60346 1717 aa33.14■■■□□ 2.9
RFX1-205ENST00000589239 CDK12Q9NYV4 1490 aaPredicted RBP33.13■■■□□ 2.89
RFX1-205ENST00000589239 YTHDC1Q96MU7 727 aaKnown RBP33.13■■■□□ 2.89
RFX1-205ENST00000589239 COL3A1P02461 1466 aaPredicted RBP33.13■■■□□ 2.89
RFX1-205ENST00000589239 PEAK1Q9H792 1746 aa33.12■■■□□ 2.89
RFX1-205ENST00000589239 COL16A1Q07092 1604 aaPredicted RBP33.1■■■□□ 2.89
RFX1-205ENST00000589239 AMPHP49418 695 aa33.1■■■□□ 2.89
RFX1-205ENST00000589239 INSRP06213 1382 aa33.1■■■□□ 2.89
RFX1-205ENST00000589239 PHRF1Q9P1Y6 1649 aaKnown RBP33.1■■■□□ 2.89
RFX1-205ENST00000589239 ZBTB7CA1YPR0 619 aa33.09■■■□□ 2.89
RFX1-205ENST00000589239 WDR43Q15061 677 aaKnown RBP eCLIP33.08■■■□□ 2.89
RFX1-205ENST00000589239 HSP90AB2PQ58FF8 381 aa33.08■■■□□ 2.89
RFX1-205ENST00000589239 CRYBG1Q9Y4K1 1723 aa33.08■■■□□ 2.89
RFX1-205ENST00000589239 ZC3H6P61129 1189 aaKnown RBP33.08■■■□□ 2.89
RFX1-205ENST00000589239 FLT4P35916 1363 aa33.08■■■□□ 2.89
RFX1-205ENST00000589239 DIAPH1O60610 1272 aaKnown RBP33.07■■■□□ 2.88
RFX1-205ENST00000589239 ARHGEF25Q86VW2 580 aa33.07■■■□□ 2.88
RFX1-205ENST00000589239 ADAMTS8Q9UP79 889 aa33.07■■■□□ 2.88
RFX1-205ENST00000589239 SHPRHQ149N8 1683 aa33.06■■■□□ 2.88
RFX1-205ENST00000589239 LTN1O94822 1766 aa33.06■■■□□ 2.88
RFX1-205ENST00000589239 HOXC9P31274 260 aa33.05■■■□□ 2.88
RFX1-205ENST00000589239 KIF24Q5T7B8 1368 aa33.04■■■□□ 2.88
RFX1-205ENST00000589239 HAP1P54257 671 aaPredicted RBP33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms