RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 PLEKHG3A1L390 1219 aa16.18■□□□□ 0.18
CCBE1-203ENST00000589116 NRKQ7Z2Y5 1582 aa16.18■□□□□ 0.18
CCBE1-203ENST00000589116 ADGRL3Q9HAR2 1447 aa16.18■□□□□ 0.18
CCBE1-203ENST00000589116 BLMP54132 1417 aaPredicted RBP16.17■□□□□ 0.18
CCBE1-203ENST00000589116 FYB1O15117 783 aa16.16■□□□□ 0.18
CCBE1-203ENST00000589116 ROBO1Q9Y6N7 1651 aa16.14■□□□□ 0.17
CCBE1-203ENST00000589116 RGPD8O14715 1765 aaPredicted RBP16.14■□□□□ 0.17
CCBE1-203ENST00000589116 XIRP1Q702N8 1843 aaKnown RBP16.14■□□□□ 0.17
CCBE1-203ENST00000589116 WDR43Q15061 677 aaKnown RBP eCLIP16.14■□□□□ 0.17
CCBE1-203ENST00000589116 GGNBP2Q9H3C7 697 aa16.13■□□□□ 0.17
CCBE1-203ENST00000589116 USP6P35125 1406 aa16.13■□□□□ 0.17
CCBE1-203ENST00000589116 ACEP12821 1306 aa16.11■□□□□ 0.17
CCBE1-203ENST00000589116 SHPRHQ149N8 1683 aa16.11■□□□□ 0.17
CCBE1-203ENST00000589116 CFAP53Q96M91 514 aa16.11■□□□□ 0.17
CCBE1-203ENST00000589116 JCADQ9P266 1359 aa16.1■□□□□ 0.17
CCBE1-203ENST00000589116 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.1■□□□□ 0.17
CCBE1-203ENST00000589116 SSH2Q76I76 1423 aa16.09■□□□□ 0.17
CCBE1-203ENST00000589116 NCOA3Q9Y6Q9 1424 aa16.09■□□□□ 0.17
CCBE1-203ENST00000589116 NUTM2FA1L443 756 aa16.09■□□□□ 0.17
CCBE1-203ENST00000589116 TNNT2P45379 298 aaPredicted RBP16.09■□□□□ 0.17
CCBE1-203ENST00000589116 MEX3CQ5U5Q3 659 aaKnown RBP16.09■□□□□ 0.17
CCBE1-203ENST00000589116 ZNF772Q68DY9 489 aaPredicted RBP16.09■□□□□ 0.17
CCBE1-203ENST00000589116 MTHFSP49914 203 aa16.08■□□□□ 0.17
CCBE1-203ENST00000589116 TMEM94Q12767 1356 aa16.08■□□□□ 0.16
CCBE1-203ENST00000589116 TTC21BQ7Z4L5 1316 aa16.08■□□□□ 0.16
CCBE1-203ENST00000589116 TTC21AQ8NDW8 1320 aa16.08■□□□□ 0.16
CCBE1-203ENST00000589116 ADAMTS8Q9UP79 889 aa16.08■□□□□ 0.16
CCBE1-203ENST00000589116 AATKQ6ZMQ8 1374 aa16.07■□□□□ 0.16
CCBE1-203ENST00000589116 PHLPP1O60346 1717 aa16.07■□□□□ 0.16
CCBE1-203ENST00000589116 PROSER2Q86WR7 435 aaPredicted RBP16.06■□□□□ 0.16
CCBE1-203ENST00000589116 NME9Q86XW9 330 aa16.06■□□□□ 0.16
CCBE1-203ENST00000589116 SMG6Q86US8 1419 aaKnown RBP16.06■□□□□ 0.16
CCBE1-203ENST00000589116 COL3A1P02461 1466 aaPredicted RBP16.05■□□□□ 0.16
CCBE1-203ENST00000589116 NGDNQ8NEJ9 315 aaKnown RBP16.05■□□□□ 0.16
CCBE1-203ENST00000589116 COG3Q96JB2 828 aa16.05■□□□□ 0.16
CCBE1-203ENST00000589116 OVOS2A0A0J9YW53 1432 aa16.05■□□□□ 0.16
CCBE1-203ENST00000589116 DCCP43146 1447 aa16.05■□□□□ 0.16
CCBE1-203ENST00000589116 OVOS2Q6IE36 1432 aa16.05■□□□□ 0.16
CCBE1-203ENST00000589116 USP54Q70EL1 1684 aa16.05■□□□□ 0.16
CCBE1-203ENST00000589116 C14orf37Q86TY3 774 aa16.05■□□□□ 0.16
CCBE1-203ENST00000589116 MAP2P11137 1827 aaKnown RBP16.04■□□□□ 0.16
CCBE1-203ENST00000589116 PMFBP1Q8TBY8 1022 aa16.04■□□□□ 0.16
CCBE1-203ENST00000589116 GTF3C3Q9Y5Q9 886 aa16.04■□□□□ 0.16
CCBE1-203ENST00000589116 PNPLA6Q8IY17 1366 aa16.04■□□□□ 0.16
CCBE1-203ENST00000589116 RXRBP28702 533 aa16.03■□□□□ 0.16
CCBE1-203ENST00000589116 CDK12Q9NYV4 1490 aaPredicted RBP16.03■□□□□ 0.16
CCBE1-203ENST00000589116 C19orf44Q9H6X5 657 aa16.02■□□□□ 0.16
CCBE1-203ENST00000589116 PHF8Q9UPP1 1060 aa16.02■□□□□ 0.16
CCBE1-203ENST00000589116 KIF1AQ12756 1690 aa16.02■□□□□ 0.16
CCBE1-203ENST00000589116 NGEFQ8N5V2 710 aa16.02■□□□□ 0.15
CCBE1-203ENST00000589116 RBM33Q96EV2 1170 aaKnown RBP16.02■□□□□ 0.15
CCBE1-203ENST00000589116 USP31Q70CQ4 1352 aa16.02■□□□□ 0.15
CCBE1-203ENST00000589116 PIK3C2AO00443 1686 aa16.02■□□□□ 0.15
CCBE1-203ENST00000589116 PDE3BQ13370 1112 aa16.01■□□□□ 0.15
CCBE1-203ENST00000589116 LRP6O75581 1613 aa16.01■□□□□ 0.15
CCBE1-203ENST00000589116 SPATA31A6Q5VVP1 1343 aa16■□□□□ 0.15
CCBE1-203ENST00000589116 MSH6P52701 1360 aa16■□□□□ 0.15
CCBE1-203ENST00000589116 POLKQ9UBT6 870 aa16■□□□□ 0.15
CCBE1-203ENST00000589116 NUDCQ9Y266 331 aa16■□□□□ 0.15
CCBE1-203ENST00000589116 ZRANB1Q9UGI0 708 aa15.99■□□□□ 0.15
CCBE1-203ENST00000589116 SLAIN2Q9P270 581 aa15.98■□□□□ 0.15
CCBE1-203ENST00000589116 C1orf167Q5SNV9 1468 aa15.98■□□□□ 0.15
CCBE1-203ENST00000589116 COL16A1Q07092 1604 aaPredicted RBP15.96■□□□□ 0.15
CCBE1-203ENST00000589116 DIAPH1O60610 1272 aaKnown RBP15.96■□□□□ 0.15
CCBE1-203ENST00000589116 ESCO1Q5FWF5 840 aa15.96■□□□□ 0.15
CCBE1-203ENST00000589116 MARF1Q9Y4F3 1742 aaKnown RBP15.96■□□□□ 0.15
CCBE1-203ENST00000589116 MST1RQ04912 1400 aa15.96■□□□□ 0.15
CCBE1-203ENST00000589116 ATF3P18847 181 aa15.95■□□□□ 0.14
CCBE1-203ENST00000589116 RUNDC1Q96C34 613 aa15.95■□□□□ 0.14
CCBE1-203ENST00000589116 SRCAPQ6ZRS2 3230 aa15.95■□□□□ 0.14
CCBE1-203ENST00000589116 U2AF1L5P0DN76 240 aaPredicted RBP15.94■□□□□ 0.14
CCBE1-203ENST00000589116 U2AF1Q01081 240 aaKnown RBP eCLIP15.94■□□□□ 0.14
CCBE1-203ENST00000589116 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
CCBE1-203ENST00000589116 CADPS2Q86UW7 1296 aa15.94■□□□□ 0.14
CCBE1-203ENST00000589116 CCDC146Q8IYE0 955 aa15.94■□□□□ 0.14
CCBE1-203ENST00000589116 EMILIN1Q9Y6C2 1016 aa15.94■□□□□ 0.14
CCBE1-203ENST00000589116 ZNF521Q96K83 1311 aa15.93■□□□□ 0.14
CCBE1-203ENST00000589116 APAF1O14727 1248 aa15.92■□□□□ 0.14
CCBE1-203ENST00000589116 PNNQ9H307 717 aaKnown RBP15.92■□□□□ 0.14
CCBE1-203ENST00000589116 TRPM3Q9HCF6 1732 aaPredicted RBP15.92■□□□□ 0.14
CCBE1-203ENST00000589116 SENP3-EIF4A1A0A087X0R7 540 aa15.92■□□□□ 0.14
CCBE1-203ENST00000589116 PPM1GO15355 546 aaPredicted RBP15.92■□□□□ 0.14
CCBE1-203ENST00000589116 PSME1Q06323 249 aa15.92■□□□□ 0.14
CCBE1-203ENST00000589116 KIF24Q5T7B8 1368 aa15.92■□□□□ 0.14
CCBE1-203ENST00000589116 SALL2Q9Y467 1007 aaPredicted RBP15.92■□□□□ 0.14
CCBE1-203ENST00000589116 PEAK1Q9H792 1746 aa15.91■□□□□ 0.14
CCBE1-203ENST00000589116 U2SURPO15042 1029 aaKnown RBP15.91■□□□□ 0.14
CCBE1-203ENST00000589116 FBLN1P23142 703 aa15.91■□□□□ 0.14
CCBE1-203ENST00000589116 RRS1Q15050 365 aaKnown RBP15.91■□□□□ 0.14
CCBE1-203ENST00000589116 ORAI2Q96SN7 254 aa15.91■□□□□ 0.14
CCBE1-203ENST00000589116 NUTM2BA6NNL0 878 aaPredicted RBP15.9■□□□□ 0.14
CCBE1-203ENST00000589116 NUTM2EB1AL46 878 aaPredicted RBP15.9■□□□□ 0.14
CCBE1-203ENST00000589116 NLRP6P59044 892 aa15.9■□□□□ 0.14
CCBE1-203ENST00000589116 NUTM2AQ8IVF1 878 aaPredicted RBP15.9■□□□□ 0.14
CCBE1-203ENST00000589116 ABTB2Q8N961 1025 aa15.9■□□□□ 0.14
CCBE1-203ENST00000589116 PAK3O75914 559 aaPredicted RBP15.89■□□□□ 0.13
CCBE1-203ENST00000589116 NEFLP07196 543 aa15.89■□□□□ 0.13
CCBE1-203ENST00000589116 SBNO1A3KN83 1393 aa15.89■□□□□ 0.13
CCBE1-203ENST00000589116 AFF2P51816 1311 aa15.89■□□□□ 0.13
CCBE1-203ENST00000589116 IL13P35225 146 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms