RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 CCDC125Q86Z20 511 aa31.01■■■□□ 2.55
NEDD4L-225ENST00000589054 NRAPQ86VF7 1730 aa30.98■■■□□ 2.55
NEDD4L-225ENST00000589054 CRYBG1Q9Y4K1 1723 aa30.98■■■□□ 2.55
NEDD4L-225ENST00000589054 ACEP12821 1306 aa30.98■■■□□ 2.55
NEDD4L-225ENST00000589054 NUTM2GQ5VZR2 741 aa30.97■■■□□ 2.55
NEDD4L-225ENST00000589054 KIAA1210Q9ULL0 1709 aa30.96■■■□□ 2.55
NEDD4L-225ENST00000589054 POLR3AO14802 1390 aaPredicted RBP30.96■■■□□ 2.55
NEDD4L-225ENST00000589054 FAM98CQ17RN3 349 aaKnown RBP30.96■■■□□ 2.55
NEDD4L-225ENST00000589054 NBPF8Q3BBV2 869 aa30.96■■■□□ 2.55
NEDD4L-225ENST00000589054 DEFB132Q7Z7B7 95 aa30.96■■■□□ 2.55
NEDD4L-225ENST00000589054 SIN3AQ96ST3 1273 aa30.96■■■□□ 2.55
NEDD4L-225ENST00000589054 PLEKHG3A1L390 1219 aa30.95■■■□□ 2.55
NEDD4L-225ENST00000589054 L3MBTL2Q969R5 705 aa30.95■■■□□ 2.55
NEDD4L-225ENST00000589054 CCDC61Q9Y6R9 512 aa30.95■■■□□ 2.55
NEDD4L-225ENST00000589054 BLMP54132 1417 aaPredicted RBP30.95■■■□□ 2.54
NEDD4L-225ENST00000589054 KRT27Q7Z3Y8 459 aa30.94■■■□□ 2.54
NEDD4L-225ENST00000589054 COL14A1Q05707 1796 aaKnown RBP30.92■■■□□ 2.54
NEDD4L-225ENST00000589054 CHRNA2Q15822 529 aa30.92■■■□□ 2.54
NEDD4L-225ENST00000589054 KIAA0232Q92628 1395 aa30.92■■■□□ 2.54
NEDD4L-225ENST00000589054 TOPAZ1Q8N9V7 1692 aa30.91■■■□□ 2.54
NEDD4L-225ENST00000589054 PRDM11Q9NQV5 511 aa30.91■■■□□ 2.54
NEDD4L-225ENST00000589054 SPATA31A5Q5VU36 1347 aa30.91■■■□□ 2.54
NEDD4L-225ENST00000589054 SPATA31A7Q8IWB4 1347 aa30.91■■■□□ 2.54
NEDD4L-225ENST00000589054 CABP2Q9NPB3 220 aa30.9■■■□□ 2.54
NEDD4L-225ENST00000589054 ZRANB1Q9UGI0 708 aa30.9■■■□□ 2.54
NEDD4L-225ENST00000589054 ZC3H6P61129 1189 aaKnown RBP30.89■■■□□ 2.54
NEDD4L-225ENST00000589054 ITSN1Q15811 1721 aa30.89■■■□□ 2.54
NEDD4L-225ENST00000589054 FAM182BQ5T319 152 aa30.88■■■□□ 2.53
NEDD4L-225ENST00000589054 CENPJQ9HC77 1338 aaPredicted RBP30.88■■■□□ 2.53
NEDD4L-225ENST00000589054 A0A0G2JS52 829 aa30.86■■■□□ 2.53
NEDD4L-225ENST00000589054 MYT1Q01538 1121 aa30.86■■■□□ 2.53
NEDD4L-225ENST00000589054 SRPK2P78362 688 aaKnown RBP30.84■■■□□ 2.53
NEDD4L-225ENST00000589054 PHRF1Q9P1Y6 1649 aaKnown RBP30.82■■■□□ 2.52
NEDD4L-225ENST00000589054 PPIP5K1Q6PFW1 1433 aa30.81■■■□□ 2.52
NEDD4L-225ENST00000589054 ABTB2Q8N961 1025 aa30.81■■■□□ 2.52
NEDD4L-225ENST00000589054 SPATA31A1Q5TZJ5 1347 aa30.8■■■□□ 2.52
NEDD4L-225ENST00000589054 NEUROD1Q13562 356 aa30.8■■■□□ 2.52
NEDD4L-225ENST00000589054 STRN4Q9NRL3 753 aa30.8■■■□□ 2.52
NEDD4L-225ENST00000589054 USP19O94966 1318 aa30.78■■■□□ 2.52
NEDD4L-225ENST00000589054 CABP1Q9NZU7 370 aa30.78■■■□□ 2.52
NEDD4L-225ENST00000589054 THSD7AQ9UPZ6 1657 aa30.77■■■□□ 2.52
NEDD4L-225ENST00000589054 SF3B2Q13435 895 aaKnown RBP30.76■■■□□ 2.51
NEDD4L-225ENST00000589054 NRKQ7Z2Y5 1582 aa30.75■■■□□ 2.51
NEDD4L-225ENST00000589054 CAMTA1Q9Y6Y1 1673 aa30.74■■■□□ 2.51
NEDD4L-225ENST00000589054 QRICH2Q9H0J4 1663 aa30.73■■■□□ 2.51
NEDD4L-225ENST00000589054 GCP02774 474 aa30.72■■■□□ 2.51
NEDD4L-225ENST00000589054 LARP1Q6PKG0 1096 aaKnown RBP30.72■■■□□ 2.51
NEDD4L-225ENST00000589054 USP35Q9P2H5 1018 aa30.72■■■□□ 2.51
NEDD4L-225ENST00000589054 SSH2Q76I76 1423 aa30.71■■■□□ 2.51
NEDD4L-225ENST00000589054 CPDO75976 1380 aa30.7■■■□□ 2.51
NEDD4L-225ENST00000589054 TRPM1Q7Z4N2 1603 aa30.7■■■□□ 2.51
NEDD4L-225ENST00000589054 EN1Q05925 392 aaPredicted RBP30.69■■■□□ 2.5
NEDD4L-225ENST00000589054 NLRP13Q86W25 1043 aa30.69■■■□□ 2.5
NEDD4L-225ENST00000589054 USP6P35125 1406 aa30.68■■■□□ 2.5
NEDD4L-225ENST00000589054 EVA1CP58658 441 aa30.67■■■□□ 2.5
NEDD4L-225ENST00000589054 LMO7Q8WWI1 1683 aa30.67■■■□□ 2.5
NEDD4L-225ENST00000589054 BAG6P46379 1132 aa30.66■■■□□ 2.5
NEDD4L-225ENST00000589054 ROCK2O75116 1388 aaKnown RBP30.66■■■□□ 2.5
NEDD4L-225ENST00000589054 BARGINQ6ZT62 677 aa30.64■■■□□ 2.5
NEDD4L-225ENST00000589054 EVC2Q86UK5 1308 aa30.64■■■□□ 2.5
NEDD4L-225ENST00000589054 NLRP6P59044 892 aa30.63■■■□□ 2.49
NEDD4L-225ENST00000589054 PSDA5PKW4 1024 aaPredicted RBP30.62■■■□□ 2.49
NEDD4L-225ENST00000589054 BRD4O60885 1362 aaPredicted RBP30.62■■■□□ 2.49
NEDD4L-225ENST00000589054 TRIM37O94972 964 aa30.6■■■□□ 2.49
NEDD4L-225ENST00000589054 TCP11L2Q8N4U5 519 aa30.59■■■□□ 2.49
NEDD4L-225ENST00000589054 COL5A2P05997 1499 aaPredicted RBP30.58■■■□□ 2.49
NEDD4L-225ENST00000589054 ZBTB7CA1YPR0 619 aa30.58■■■□□ 2.49
NEDD4L-225ENST00000589054 EZH2Q15910 746 aaKnown RBP30.58■■■□□ 2.49
NEDD4L-225ENST00000589054 SLIT3O75094 1523 aa30.57■■■□□ 2.49
NEDD4L-225ENST00000589054 FAM196AQ6ZSG2 479 aa30.57■■■□□ 2.48
NEDD4L-225ENST00000589054 DISP2A7MBM2 1401 aa30.56■■■□□ 2.48
NEDD4L-225ENST00000589054 TTC21BQ7Z4L5 1316 aa30.56■■■□□ 2.48
NEDD4L-225ENST00000589054 AXIN2Q9Y2T1 843 aa30.56■■■□□ 2.48
NEDD4L-225ENST00000589054 TNS1Q9HBL0 1735 aaKnown RBP30.56■■■□□ 2.48
NEDD4L-225ENST00000589054 PIK3C2AO00443 1686 aa30.55■■■□□ 2.48
NEDD4L-225ENST00000589054 CAMKK2Q96RR4 588 aa30.55■■■□□ 2.48
NEDD4L-225ENST00000589054 RGPD1P0DJD0 1748 aa30.55■■■□□ 2.48
NEDD4L-225ENST00000589054 AATKQ6ZMQ8 1374 aa30.54■■■□□ 2.48
NEDD4L-225ENST00000589054 PDE3BQ13370 1112 aa30.52■■■□□ 2.48
NEDD4L-225ENST00000589054 CPSF1Q10570 1443 aaKnown RBP30.52■■■□□ 2.48
NEDD4L-225ENST00000589054 ZNF692Q9BU19 519 aaPredicted RBP30.5■■■□□ 2.47
NEDD4L-225ENST00000589054 THRAP3Q9Y2W1 955 aaKnown RBP30.5■■■□□ 2.47
NEDD4L-225ENST00000589054 COL18A1P39060 1754 aa30.49■■■□□ 2.47
NEDD4L-225ENST00000589054 R3HDM1Q15032 1099 aaKnown RBP30.49■■■□□ 2.47
NEDD4L-225ENST00000589054 ARHGEF25Q86VW2 580 aa30.49■■■□□ 2.47
NEDD4L-225ENST00000589054 CRB1P82279 1406 aa30.48■■■□□ 2.47
NEDD4L-225ENST00000589054 APBA3O96018 575 aa30.48■■■□□ 2.47
NEDD4L-225ENST00000589054 SOX12O15370 315 aa30.47■■■□□ 2.47
NEDD4L-225ENST00000589054 CARD11Q9BXL7 1154 aa30.47■■■□□ 2.47
NEDD4L-225ENST00000589054 AKAP12Q02952 1782 aa30.43■■■□□ 2.46
NEDD4L-225ENST00000589054 KTN1Q86UP2 1357 aaKnown RBP30.43■■■□□ 2.46
NEDD4L-225ENST00000589054 SBNO2Q9Y2G9 1366 aa30.43■■■□□ 2.46
NEDD4L-225ENST00000589054 CD163L1Q9NR16 1453 aa30.43■■■□□ 2.46
NEDD4L-225ENST00000589054 TOM1L2Q6ZVM7 507 aa30.42■■■□□ 2.46
NEDD4L-225ENST00000589054 TTC21AQ8NDW8 1320 aa30.42■■■□□ 2.46
NEDD4L-225ENST00000589054 WDR17Q8IZU2 1322 aa30.4■■■□□ 2.46
NEDD4L-225ENST00000589054 LRP5O75197 1615 aa30.4■■■□□ 2.46
NEDD4L-225ENST00000589054 PARP4Q9UKK3 1724 aaKnown RBP30.39■■■□□ 2.46
NEDD4L-225ENST00000589054 NFAT5O94916 1531 aa30.39■■■□□ 2.46
NEDD4L-225ENST00000589054 PTF1AQ7RTS3 328 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms