RNA–Protein interactions for RNA: ENST00000589017.5

PRKAR1A-216, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 3

Gene PRKAR1A, Length 1,116 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-216ENST00000589017 RALGAPBQ86X10 1494 aa26.64■■□□□ 1.86
PRKAR1A-216ENST00000589017 PLEKHG3A1L390 1219 aa26.64■■□□□ 1.86
PRKAR1A-216ENST00000589017 PLEKHG5O94827 1062 aa26.63■■□□□ 1.85
PRKAR1A-216ENST00000589017 PPIP5K1Q6PFW1 1433 aa26.63■■□□□ 1.85
PRKAR1A-216ENST00000589017 ACEP12821 1306 aa26.63■■□□□ 1.85
PRKAR1A-216ENST00000589017 PAK3O75914 559 aaPredicted RBP26.62■■□□□ 1.85
PRKAR1A-216ENST00000589017 CABP2Q9NPB3 220 aa26.61■■□□□ 1.85
PRKAR1A-216ENST00000589017 PHRF1Q9P1Y6 1649 aaKnown RBP26.61■■□□□ 1.85
PRKAR1A-216ENST00000589017 UNC5CLQ8IV45 518 aa26.6■■□□□ 1.85
PRKAR1A-216ENST00000589017 EVC2Q86UK5 1308 aa26.59■■□□□ 1.85
PRKAR1A-216ENST00000589017 COL14A1Q05707 1796 aaKnown RBP26.58■■□□□ 1.85
PRKAR1A-216ENST00000589017 GLI3P10071 1580 aa26.58■■□□□ 1.85
PRKAR1A-216ENST00000589017 NRAPQ86VF7 1730 aa26.57■■□□□ 1.84
PRKAR1A-216ENST00000589017 GJD4Q96KN9 370 aaPredicted RBP26.56■■□□□ 1.84
PRKAR1A-216ENST00000589017 CARD11Q9BXL7 1154 aa26.55■■□□□ 1.84
PRKAR1A-216ENST00000589017 SBNO2Q9Y2G9 1366 aa26.55■■□□□ 1.84
PRKAR1A-216ENST00000589017 FAM83GA6ND36 823 aa26.53■■□□□ 1.84
PRKAR1A-216ENST00000589017 UPF1Q92900 1129 aaKnown RBP eCLIP26.53■■□□□ 1.84
PRKAR1A-216ENST00000589017 BRD4O60885 1362 aaPredicted RBP26.52■■□□□ 1.84
PRKAR1A-216ENST00000589017 VPS72Q15906 364 aa26.5■■□□□ 1.83
PRKAR1A-216ENST00000589017 CABP1Q9NZU7 370 aa26.5■■□□□ 1.83
PRKAR1A-216ENST00000589017 NRKQ7Z2Y5 1582 aa26.5■■□□□ 1.83
PRKAR1A-216ENST00000589017 USP6P35125 1406 aa26.49■■□□□ 1.83
PRKAR1A-216ENST00000589017 AKAP12Q02952 1782 aa26.49■■□□□ 1.83
PRKAR1A-216ENST00000589017 ATAD2Q6PL18 1390 aa26.46■■□□□ 1.83
PRKAR1A-216ENST00000589017 NUTM2GQ5VZR2 741 aa26.46■■□□□ 1.83
PRKAR1A-216ENST00000589017 ABTB2Q8N961 1025 aa26.46■■□□□ 1.83
PRKAR1A-216ENST00000589017 BTG4Q9NY30 223 aa26.46■■□□□ 1.83
PRKAR1A-216ENST00000589017 USP19O94966 1318 aa26.45■■□□□ 1.83
PRKAR1A-216ENST00000589017 KIAA0232Q92628 1395 aa26.45■■□□□ 1.82
PRKAR1A-216ENST00000589017 PRDM11Q9NQV5 511 aa26.44■■□□□ 1.82
PRKAR1A-216ENST00000589017 SSH2Q76I76 1423 aa26.44■■□□□ 1.82
PRKAR1A-216ENST00000589017 PIK3C2AO00443 1686 aa26.44■■□□□ 1.82
PRKAR1A-216ENST00000589017 BRWD3Q6RI45 1802 aa26.44■■□□□ 1.82
PRKAR1A-216ENST00000589017 CCDC9Q9Y3X0 531 aaKnown RBP26.42■■□□□ 1.82
PRKAR1A-216ENST00000589017 NLRP13Q86W25 1043 aa26.41■■□□□ 1.82
PRKAR1A-216ENST00000589017 MON2Q7Z3U7 1717 aa26.41■■□□□ 1.82
PRKAR1A-216ENST00000589017 CLSPNQ9HAW4 1339 aa26.4■■□□□ 1.82
PRKAR1A-216ENST00000589017 CPSF1Q10570 1443 aaKnown RBP26.39■■□□□ 1.82
PRKAR1A-216ENST00000589017 ZC3H6P61129 1189 aaKnown RBP26.39■■□□□ 1.82
PRKAR1A-216ENST00000589017 PCGF6Q9BYE7 350 aa26.39■■□□□ 1.82
PRKAR1A-216ENST00000589017 SLIT3O75094 1523 aa26.39■■□□□ 1.81
PRKAR1A-216ENST00000589017 LMO7Q8WWI1 1683 aa26.38■■□□□ 1.81
PRKAR1A-216ENST00000589017 CPDO75976 1380 aa26.38■■□□□ 1.81
PRKAR1A-216ENST00000589017 ZNF692Q9BU19 519 aaPredicted RBP26.38■■□□□ 1.81
PRKAR1A-216ENST00000589017 ONECUT3O60422 494 aaPredicted RBP26.37■■□□□ 1.81
PRKAR1A-216ENST00000589017 CHRNA2Q15822 529 aa26.36■■□□□ 1.81
PRKAR1A-216ENST00000589017 SEPT12Q8IYM1 358 aa26.35■■□□□ 1.81
PRKAR1A-216ENST00000589017 GCP02774 474 aa26.34■■□□□ 1.81
PRKAR1A-216ENST00000589017 SPATA31A5Q5VU36 1347 aa26.34■■□□□ 1.81
PRKAR1A-216ENST00000589017 SPATA31A7Q8IWB4 1347 aa26.34■■□□□ 1.81
PRKAR1A-216ENST00000589017 KTN1Q86UP2 1357 aaKnown RBP26.33■■□□□ 1.81
PRKAR1A-216ENST00000589017 NLRP6P59044 892 aa26.33■■□□□ 1.81
PRKAR1A-216ENST00000589017 TIMELESSQ9UNS1 1208 aa26.33■■□□□ 1.81
PRKAR1A-216ENST00000589017 CAMTA1Q9Y6Y1 1673 aa26.33■■□□□ 1.81
PRKAR1A-216ENST00000589017 TTC21BQ7Z4L5 1316 aa26.33■■□□□ 1.81
PRKAR1A-216ENST00000589017 THSD7AQ9UPZ6 1657 aa26.32■■□□□ 1.8
PRKAR1A-216ENST00000589017 CD163L1Q9NR16 1453 aa26.32■■□□□ 1.8
PRKAR1A-216ENST00000589017 TESK2Q96S53 571 aa26.32■■□□□ 1.8
PRKAR1A-216ENST00000589017 TTC21AQ8NDW8 1320 aa26.32■■□□□ 1.8
PRKAR1A-216ENST00000589017 ST20-MTHFSA0A0A6YYL1 179 aa26.31■■□□□ 1.8
PRKAR1A-216ENST00000589017 PUS7Q96PZ0 661 aaKnown RBP26.31■■□□□ 1.8
PRKAR1A-216ENST00000589017 EP400Q96L91 3159 aa26.31■■□□□ 1.8
PRKAR1A-216ENST00000589017 FAM98CQ17RN3 349 aaKnown RBP26.3■■□□□ 1.8
PRKAR1A-216ENST00000589017 USP54Q70EL1 1684 aa26.29■■□□□ 1.8
PRKAR1A-216ENST00000589017 STRN4Q9NRL3 753 aa26.28■■□□□ 1.8
PRKAR1A-216ENST00000589017 USP47Q96K76 1375 aa26.28■■□□□ 1.8
PRKAR1A-216ENST00000589017 SLC24A1O60721 1099 aa26.27■■□□□ 1.8
PRKAR1A-216ENST00000589017 SPATA31A1Q5TZJ5 1347 aa26.27■■□□□ 1.8
PRKAR1A-216ENST00000589017 A0A0G2JS52 829 aa26.26■■□□□ 1.79
PRKAR1A-216ENST00000589017 MYT1Q01538 1121 aa26.26■■□□□ 1.79
PRKAR1A-216ENST00000589017 KRT27Q7Z3Y8 459 aa26.26■■□□□ 1.79
PRKAR1A-216ENST00000589017 TMC1Q8TDI8 760 aa26.26■■□□□ 1.79
PRKAR1A-216ENST00000589017 COL18A1P39060 1754 aa26.25■■□□□ 1.79
PRKAR1A-216ENST00000589017 COL5A2P05997 1499 aaPredicted RBP26.25■■□□□ 1.79
PRKAR1A-216ENST00000589017 CCDC125Q86Z20 511 aa26.25■■□□□ 1.79
PRKAR1A-216ENST00000589017 SLC12A5Q9H2X9 1139 aa26.24■■□□□ 1.79
PRKAR1A-216ENST00000589017 AATKQ6ZMQ8 1374 aa26.23■■□□□ 1.79
PRKAR1A-216ENST00000589017 NINLQ9Y2I6 1382 aa26.23■■□□□ 1.79
PRKAR1A-216ENST00000589017 EVA1CP58658 441 aa26.23■■□□□ 1.79
PRKAR1A-216ENST00000589017 HDGFL2Q7Z4V5 671 aaPredicted RBP26.23■■□□□ 1.79
PRKAR1A-216ENST00000589017 NFAT5O94916 1531 aa26.23■■□□□ 1.79
PRKAR1A-216ENST00000589017 BLMP54132 1417 aaPredicted RBP26.22■■□□□ 1.79
PRKAR1A-216ENST00000589017 EDC4Q6P2E9 1401 aaKnown RBP26.22■■□□□ 1.79
PRKAR1A-216ENST00000589017 KCNH5Q8NCM2 988 aa26.22■■□□□ 1.79
PRKAR1A-216ENST00000589017 A0A1W2PP64 1363 aa26.21■■□□□ 1.79
PRKAR1A-216ENST00000589017 TERF2IPQ9NYB0 399 aa26.21■■□□□ 1.79
PRKAR1A-216ENST00000589017 USP31Q70CQ4 1352 aa26.2■■□□□ 1.79
PRKAR1A-216ENST00000589017 LARP1Q6PKG0 1096 aaKnown RBP26.2■■□□□ 1.78
PRKAR1A-216ENST00000589017 ZBTB7CA1YPR0 619 aa26.19■■□□□ 1.78
PRKAR1A-216ENST00000589017 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.18■■□□□ 1.785e-7■■□□□ 11.7
PRKAR1A-216ENST00000589017 ABCC6O95255 1503 aa26.18■■□□□ 1.78
PRKAR1A-216ENST00000589017 RGPD5Q99666 1765 aa26.18■■□□□ 1.78
PRKAR1A-216ENST00000589017 BARGINQ6ZT62 677 aa26.17■■□□□ 1.78
PRKAR1A-216ENST00000589017 ARHGEF25Q86VW2 580 aa26.17■■□□□ 1.78
PRKAR1A-216ENST00000589017 CCER1Q8TC90 406 aaPredicted RBP26.17■■□□□ 1.78
PRKAR1A-216ENST00000589017 CRB1P82279 1406 aa26.16■■□□□ 1.78
PRKAR1A-216ENST00000589017 TMF1P82094 1093 aa26.16■■□□□ 1.78
PRKAR1A-216ENST00000589017 NME9Q86XW9 330 aa26.16■■□□□ 1.78
PRKAR1A-216ENST00000589017 USP35Q9P2H5 1018 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms