RNA–Protein interactions for RNA: ENST00000588737.5

RPRD1A-207, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 2 BASIC

Gene RPRD1A, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-207ENST00000588737 VPS72Q15906 364 aa32.13■■■□□ 2.73
RPRD1A-207ENST00000588737 ALS2Q96Q42 1657 aa32.13■■■□□ 2.73
RPRD1A-207ENST00000588737 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.13■■■□□ 2.73
RPRD1A-207ENST00000588737 POLR3AO14802 1390 aaPredicted RBP32.11■■■□□ 2.73
RPRD1A-207ENST00000588737 ABCA3Q99758 1704 aa32.11■■■□□ 2.73
RPRD1A-207ENST00000588737 RALGAPBQ86X10 1494 aa32.1■■■□□ 2.73
RPRD1A-207ENST00000588737 BTG4Q9NY30 223 aa32.09■■■□□ 2.73
RPRD1A-207ENST00000588737 TRPM1Q7Z4N2 1603 aa32.08■■■□□ 2.73
RPRD1A-207ENST00000588737 NUTM2GQ5VZR2 741 aa32.08■■■□□ 2.73
RPRD1A-207ENST00000588737 PPIP5K1Q6PFW1 1433 aa32.06■■■□□ 2.72
RPRD1A-207ENST00000588737 QRICH2Q9H0J4 1663 aa32.05■■■□□ 2.72
RPRD1A-207ENST00000588737 EVC2Q86UK5 1308 aa32.05■■■□□ 2.72
RPRD1A-207ENST00000588737 GLI3P10071 1580 aa32.05■■■□□ 2.72
RPRD1A-207ENST00000588737 PLCH1Q4KWH8 1693 aa32.05■■■□□ 2.72
RPRD1A-207ENST00000588737 TOPAZ1Q8N9V7 1692 aa32.05■■■□□ 2.72
RPRD1A-207ENST00000588737 NWD2Q9ULI1 1742 aa32.04■■■□□ 2.72
RPRD1A-207ENST00000588737 ABTB2Q8N961 1025 aa32.04■■■□□ 2.72
RPRD1A-207ENST00000588737 PRDM11Q9NQV5 511 aa32.04■■■□□ 2.72
RPRD1A-207ENST00000588737 CABP1Q9NZU7 370 aa32.03■■■□□ 2.72
RPRD1A-207ENST00000588737 TONSLQ96HA7 1378 aa32.03■■■□□ 2.72
RPRD1A-207ENST00000588737 SEPT12Q8IYM1 358 aa32.02■■■□□ 2.72
RPRD1A-207ENST00000588737 ZC3H6P61129 1189 aaKnown RBP32■■■□□ 2.71
RPRD1A-207ENST00000588737 ONECUT3O60422 494 aaPredicted RBP31.99■■■□□ 2.71
RPRD1A-207ENST00000588737 COL14A1Q05707 1796 aaKnown RBP31.99■■■□□ 2.71
RPRD1A-207ENST00000588737 CARD11Q9BXL7 1154 aa31.97■■■□□ 2.71
RPRD1A-207ENST00000588737 KIAA0232Q92628 1395 aa31.96■■■□□ 2.71
RPRD1A-207ENST00000588737 A0A0G2JS52 829 aa31.96■■■□□ 2.71
RPRD1A-207ENST00000588737 MYT1Q01538 1121 aa31.96■■■□□ 2.71
RPRD1A-207ENST00000588737 CHRNA2Q15822 529 aa31.96■■■□□ 2.71
RPRD1A-207ENST00000588737 NLRP13Q86W25 1043 aa31.96■■■□□ 2.71
RPRD1A-207ENST00000588737 CCDC125Q86Z20 511 aa31.95■■■□□ 2.71
RPRD1A-207ENST00000588737 CRYBG1Q9Y4K1 1723 aa31.95■■■□□ 2.7
RPRD1A-207ENST00000588737 FAM98CQ17RN3 349 aaKnown RBP31.93■■■□□ 2.7
RPRD1A-207ENST00000588737 BRD4O60885 1362 aaPredicted RBP31.93■■■□□ 2.7
RPRD1A-207ENST00000588737 NRAPQ86VF7 1730 aa31.9■■■□□ 2.7
RPRD1A-207ENST00000588737 KRT27Q7Z3Y8 459 aa31.9■■■□□ 2.7
RPRD1A-207ENST00000588737 STRN4Q9NRL3 753 aa31.89■■■□□ 2.7
RPRD1A-207ENST00000588737 SPATA31A5Q5VU36 1347 aa31.89■■■□□ 2.7
RPRD1A-207ENST00000588737 SPATA31A7Q8IWB4 1347 aa31.89■■■□□ 2.7
RPRD1A-207ENST00000588737 EVA1CP58658 441 aa31.88■■■□□ 2.69
RPRD1A-207ENST00000588737 PHRF1Q9P1Y6 1649 aaKnown RBP31.88■■■□□ 2.69
RPRD1A-207ENST00000588737 USP6P35125 1406 aa31.87■■■□□ 2.69
RPRD1A-207ENST00000588737 USP19O94966 1318 aa31.87■■■□□ 2.69
RPRD1A-207ENST00000588737 GCP02774 474 aa31.87■■■□□ 2.69
RPRD1A-207ENST00000588737 ZNF692Q9BU19 519 aaPredicted RBP31.87■■■□□ 2.69
RPRD1A-207ENST00000588737 NLRP6P59044 892 aa31.86■■■□□ 2.69
RPRD1A-207ENST00000588737 BRWD3Q6RI45 1802 aa31.86■■■□□ 2.69
RPRD1A-207ENST00000588737 SF3B2Q13435 895 aaKnown RBP31.81■■■□□ 2.68
RPRD1A-207ENST00000588737 CPDO75976 1380 aa31.81■■■□□ 2.68
RPRD1A-207ENST00000588737 SPATA31A1Q5TZJ5 1347 aa31.8■■■□□ 2.68
RPRD1A-207ENST00000588737 EP400Q96L91 3159 aa31.8■■■□□ 2.68
RPRD1A-207ENST00000588737 ZBTB7CA1YPR0 619 aa31.8■■■□□ 2.68
RPRD1A-207ENST00000588737 SBNO2Q9Y2G9 1366 aa31.8■■■□□ 2.68
RPRD1A-207ENST00000588737 BLMP54132 1417 aaPredicted RBP31.79■■■□□ 2.68
RPRD1A-207ENST00000588737 TTC21BQ7Z4L5 1316 aa31.78■■■□□ 2.68
RPRD1A-207ENST00000588737 NRKQ7Z2Y5 1582 aa31.78■■■□□ 2.68
RPRD1A-207ENST00000588737 USP35Q9P2H5 1018 aa31.78■■■□□ 2.68
RPRD1A-207ENST00000588737 SSH2Q76I76 1423 aa31.77■■■□□ 2.68
RPRD1A-207ENST00000588737 KTN1Q86UP2 1357 aaKnown RBP31.74■■■□□ 2.67
RPRD1A-207ENST00000588737 LARP1Q6PKG0 1096 aaKnown RBP31.74■■■□□ 2.67
RPRD1A-207ENST00000588737 TMC1Q8TDI8 760 aa31.74■■■□□ 2.67
RPRD1A-207ENST00000588737 CAMTA1Q9Y6Y1 1673 aa31.73■■■□□ 2.67
RPRD1A-207ENST00000588737 TTC21AQ8NDW8 1320 aa31.73■■■□□ 2.67
RPRD1A-207ENST00000588737 ZRANB1Q9UGI0 708 aa31.72■■■□□ 2.67
RPRD1A-207ENST00000588737 CPSF1Q10570 1443 aaKnown RBP31.71■■■□□ 2.67
RPRD1A-207ENST00000588737 FAM182BQ5T319 152 aa31.7■■■□□ 2.67
RPRD1A-207ENST00000588737 DEFB132Q7Z7B7 95 aa31.7■■■□□ 2.67
RPRD1A-207ENST00000588737 BARGINQ6ZT62 677 aa31.68■■■□□ 2.66
RPRD1A-207ENST00000588737 TCP11L2Q8N4U5 519 aa31.68■■■□□ 2.66
RPRD1A-207ENST00000588737 KCNH5Q8NCM2 988 aa31.68■■■□□ 2.66
RPRD1A-207ENST00000588737 AKAP12Q02952 1782 aa31.67■■■□□ 2.66
RPRD1A-207ENST00000588737 SLIT3O75094 1523 aa31.67■■■□□ 2.66
RPRD1A-207ENST00000588737 ST20-MTHFSA0A0A6YYL1 179 aa31.67■■■□□ 2.66
RPRD1A-207ENST00000588737 HDGFL2Q7Z4V5 671 aaPredicted RBP31.67■■■□□ 2.66
RPRD1A-207ENST00000588737 PCGF6Q9BYE7 350 aa31.67■■■□□ 2.66
RPRD1A-207ENST00000588737 PIK3C2AO00443 1686 aa31.67■■■□□ 2.66
RPRD1A-207ENST00000588737 SOX12O15370 315 aa31.66■■■□□ 2.66
RPRD1A-207ENST00000588737 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.66■■■□□ 2.669e-7■■□□□ 11.7
RPRD1A-207ENST00000588737 PUS7Q96PZ0 661 aaKnown RBP31.66■■■□□ 2.66
RPRD1A-207ENST00000588737 SLC12A5Q9H2X9 1139 aa31.66■■■□□ 2.66
RPRD1A-207ENST00000588737 AATKQ6ZMQ8 1374 aa31.66■■■□□ 2.66
RPRD1A-207ENST00000588737 LMO7Q8WWI1 1683 aa31.65■■■□□ 2.66
RPRD1A-207ENST00000588737 THSD7AQ9UPZ6 1657 aa31.65■■■□□ 2.66
RPRD1A-207ENST00000588737 SLC24A1O60721 1099 aa31.65■■■□□ 2.66
RPRD1A-207ENST00000588737 BAG6P46379 1132 aa31.63■■■□□ 2.65
RPRD1A-207ENST00000588737 PDE3BQ13370 1112 aa31.63■■■□□ 2.65
RPRD1A-207ENST00000588737 THRAP3Q9Y2W1 955 aaKnown RBP31.63■■■□□ 2.65
RPRD1A-207ENST00000588737 COL5A2P05997 1499 aaPredicted RBP31.62■■■□□ 2.65
RPRD1A-207ENST00000588737 TERF2IPQ9NYB0 399 aa31.62■■■□□ 2.65
RPRD1A-207ENST00000588737 ARHGEF25Q86VW2 580 aa31.61■■■□□ 2.65
RPRD1A-207ENST00000588737 TESK2Q96S53 571 aa31.61■■■□□ 2.65
RPRD1A-207ENST00000588737 FAM196AQ6ZSG2 479 aa31.6■■■□□ 2.65
RPRD1A-207ENST00000588737 TOM1L2Q6ZVM7 507 aa31.59■■■□□ 2.65
RPRD1A-207ENST00000588737 AXIN2Q9Y2T1 843 aa31.58■■■□□ 2.65
RPRD1A-207ENST00000588737 CRB1P82279 1406 aa31.58■■■□□ 2.65
RPRD1A-207ENST00000588737 NME9Q86XW9 330 aa31.57■■■□□ 2.64
RPRD1A-207ENST00000588737 CD163L1Q9NR16 1453 aa31.57■■■□□ 2.64
RPRD1A-207ENST00000588737 TIMELESSQ9UNS1 1208 aa31.56■■■□□ 2.64
RPRD1A-207ENST00000588737 MON2Q7Z3U7 1717 aa31.55■■■□□ 2.64
RPRD1A-207ENST00000588737 USP31Q70CQ4 1352 aa31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms