RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 NBPF8Q3BBV2 869 aa20.63■□□□□ 0.89
DDX39A-208ENST00000588692 RALGAPBQ86X10 1494 aa20.63■□□□□ 0.89
DDX39A-208ENST00000588692 ACEP12821 1306 aa20.62■□□□□ 0.89
DDX39A-208ENST00000588692 PPIP5K1Q6PFW1 1433 aa20.62■□□□□ 0.89
DDX39A-208ENST00000588692 PAK3O75914 559 aaPredicted RBP20.62■□□□□ 0.89
DDX39A-208ENST00000588692 UNC5CLQ8IV45 518 aa20.62■□□□□ 0.89
DDX39A-208ENST00000588692 EVC2Q86UK5 1308 aa20.61■□□□□ 0.89
DDX39A-208ENST00000588692 COL14A1Q05707 1796 aaKnown RBP20.6■□□□□ 0.89
DDX39A-208ENST00000588692 PHRF1Q9P1Y6 1649 aaKnown RBP20.59■□□□□ 0.89
DDX39A-208ENST00000588692 PLEKHG5O94827 1062 aa20.59■□□□□ 0.89
DDX39A-208ENST00000588692 CABP2Q9NPB3 220 aa20.59■□□□□ 0.89
DDX39A-208ENST00000588692 BRD4O60885 1362 aaPredicted RBP20.58■□□□□ 0.89
DDX39A-208ENST00000588692 SBNO2Q9Y2G9 1366 aa20.58■□□□□ 0.89
DDX39A-208ENST00000588692 GJD4Q96KN9 370 aaPredicted RBP20.58■□□□□ 0.89
DDX39A-208ENST00000588692 NRAPQ86VF7 1730 aa20.57■□□□□ 0.88
DDX39A-208ENST00000588692 GLI3P10071 1580 aa20.57■□□□□ 0.88
DDX39A-208ENST00000588692 CARD11Q9BXL7 1154 aa20.56■□□□□ 0.88
DDX39A-208ENST00000588692 UPF1Q92900 1129 aaKnown RBP eCLIP20.55■□□□□ 0.88
DDX39A-208ENST00000588692 FAM83GA6ND36 823 aa20.54■□□□□ 0.88
DDX39A-208ENST00000588692 VPS72Q15906 364 aa20.54■□□□□ 0.88
DDX39A-208ENST00000588692 ATAD2Q6PL18 1390 aa20.53■□□□□ 0.88
DDX39A-208ENST00000588692 USP6P35125 1406 aa20.53■□□□□ 0.88
DDX39A-208ENST00000588692 CABP1Q9NZU7 370 aa20.52■□□□□ 0.88
DDX39A-208ENST00000588692 NRKQ7Z2Y5 1582 aa20.52■□□□□ 0.87
DDX39A-208ENST00000588692 AKAP12Q02952 1782 aa20.51■□□□□ 0.87
DDX39A-208ENST00000588692 ABTB2Q8N961 1025 aa20.5■□□□□ 0.87
DDX39A-208ENST00000588692 PRDM11Q9NQV5 511 aa20.5■□□□□ 0.87
DDX39A-208ENST00000588692 BTG4Q9NY30 223 aa20.5■□□□□ 0.87
DDX39A-208ENST00000588692 USP19O94966 1318 aa20.49■□□□□ 0.87
DDX39A-208ENST00000588692 CLSPNQ9HAW4 1339 aa20.49■□□□□ 0.87
DDX39A-208ENST00000588692 KIAA0232Q92628 1395 aa20.48■□□□□ 0.87
DDX39A-208ENST00000588692 NUTM2GQ5VZR2 741 aa20.48■□□□□ 0.87
DDX39A-208ENST00000588692 NLRP13Q86W25 1043 aa20.48■□□□□ 0.87
DDX39A-208ENST00000588692 CCDC9Q9Y3X0 531 aaKnown RBP20.47■□□□□ 0.87
DDX39A-208ENST00000588692 SSH2Q76I76 1423 aa20.46■□□□□ 0.87
DDX39A-208ENST00000588692 ZNF692Q9BU19 519 aaPredicted RBP20.46■□□□□ 0.87
DDX39A-208ENST00000588692 PIK3C2AO00443 1686 aa20.46■□□□□ 0.87
DDX39A-208ENST00000588692 CPDO75976 1380 aa20.46■□□□□ 0.87
DDX39A-208ENST00000588692 BRWD3Q6RI45 1802 aa20.45■□□□□ 0.86
DDX39A-208ENST00000588692 MON2Q7Z3U7 1717 aa20.45■□□□□ 0.86
DDX39A-208ENST00000588692 ONECUT3O60422 494 aaPredicted RBP20.44■□□□□ 0.86
DDX39A-208ENST00000588692 TIMELESSQ9UNS1 1208 aa20.44■□□□□ 0.86
DDX39A-208ENST00000588692 CPSF1Q10570 1443 aaKnown RBP20.44■□□□□ 0.86
DDX39A-208ENST00000588692 SLIT3O75094 1523 aa20.44■□□□□ 0.86
DDX39A-208ENST00000588692 ZC3H6P61129 1189 aaKnown RBP20.43■□□□□ 0.86
DDX39A-208ENST00000588692 LMO7Q8WWI1 1683 aa20.42■□□□□ 0.86
DDX39A-208ENST00000588692 EP400Q96L91 3159 aa20.42■□□□□ 0.86
DDX39A-208ENST00000588692 SLC24A1O60721 1099 aa20.42■□□□□ 0.86
DDX39A-208ENST00000588692 GCP02774 474 aa20.41■□□□□ 0.86
DDX39A-208ENST00000588692 SEPT12Q8IYM1 358 aa20.41■□□□□ 0.86
DDX39A-208ENST00000588692 PUS7Q96PZ0 661 aaKnown RBP20.41■□□□□ 0.86
DDX39A-208ENST00000588692 PCGF6Q9BYE7 350 aa20.41■□□□□ 0.86
DDX39A-208ENST00000588692 SPATA31A5Q5VU36 1347 aa20.4■□□□□ 0.86
DDX39A-208ENST00000588692 SPATA31A7Q8IWB4 1347 aa20.4■□□□□ 0.86
DDX39A-208ENST00000588692 TTC21AQ8NDW8 1320 aa20.4■□□□□ 0.86
DDX39A-208ENST00000588692 NLRP6P59044 892 aa20.4■□□□□ 0.86
DDX39A-208ENST00000588692 CHRNA2Q15822 529 aa20.4■□□□□ 0.86
DDX39A-208ENST00000588692 KTN1Q86UP2 1357 aaKnown RBP20.4■□□□□ 0.86
DDX39A-208ENST00000588692 TTC21BQ7Z4L5 1316 aa20.4■□□□□ 0.86
DDX39A-208ENST00000588692 THSD7AQ9UPZ6 1657 aa20.38■□□□□ 0.85
DDX39A-208ENST00000588692 CCDC125Q86Z20 511 aa20.38■□□□□ 0.85
DDX39A-208ENST00000588692 CAMTA1Q9Y6Y1 1673 aa20.38■□□□□ 0.85
DDX39A-208ENST00000588692 ST20-MTHFSA0A0A6YYL1 179 aa20.37■□□□□ 0.85
DDX39A-208ENST00000588692 CD163L1Q9NR16 1453 aa20.37■□□□□ 0.85
DDX39A-208ENST00000588692 FAM98CQ17RN3 349 aaKnown RBP20.37■□□□□ 0.85
DDX39A-208ENST00000588692 TESK2Q96S53 571 aa20.37■□□□□ 0.85
DDX39A-208ENST00000588692 USP54Q70EL1 1684 aa20.36■□□□□ 0.85
DDX39A-208ENST00000588692 NINLQ9Y2I6 1382 aa20.36■□□□□ 0.85
DDX39A-208ENST00000588692 SPATA31A1Q5TZJ5 1347 aa20.35■□□□□ 0.85
DDX39A-208ENST00000588692 USP47Q96K76 1375 aa20.35■□□□□ 0.85
DDX39A-208ENST00000588692 A0A0G2JS52 829 aa20.35■□□□□ 0.85
DDX39A-208ENST00000588692 MYT1Q01538 1121 aa20.35■□□□□ 0.85
DDX39A-208ENST00000588692 KRT27Q7Z3Y8 459 aa20.35■□□□□ 0.85
DDX39A-208ENST00000588692 STRN4Q9NRL3 753 aa20.35■□□□□ 0.85
DDX39A-208ENST00000588692 HDGFL2Q7Z4V5 671 aaPredicted RBP20.34■□□□□ 0.85
DDX39A-208ENST00000588692 TMC1Q8TDI8 760 aa20.34■□□□□ 0.85
DDX39A-208ENST00000588692 AATKQ6ZMQ8 1374 aa20.34■□□□□ 0.85
DDX39A-208ENST00000588692 COL5A2P05997 1499 aaPredicted RBP20.33■□□□□ 0.85
DDX39A-208ENST00000588692 EVA1CP58658 441 aa20.33■□□□□ 0.85
DDX39A-208ENST00000588692 KCNH5Q8NCM2 988 aa20.33■□□□□ 0.85
DDX39A-208ENST00000588692 TERF2IPQ9NYB0 399 aa20.33■□□□□ 0.85
DDX39A-208ENST00000588692 BLMP54132 1417 aaPredicted RBP20.33■□□□□ 0.84
DDX39A-208ENST00000588692 EDC4Q6P2E9 1401 aaKnown RBP20.33■□□□□ 0.84
DDX39A-208ENST00000588692 COL18A1P39060 1754 aa20.32■□□□□ 0.84
DDX39A-208ENST00000588692 SLC12A5Q9H2X9 1139 aa20.31■□□□□ 0.84
DDX39A-208ENST00000588692 NFAT5O94916 1531 aa20.31■□□□□ 0.84
DDX39A-208ENST00000588692 A0A1W2PP64 1363 aa20.3■□□□□ 0.84
DDX39A-208ENST00000588692 USP31Q70CQ4 1352 aa20.3■□□□□ 0.84
DDX39A-208ENST00000588692 ABCC6O95255 1503 aa20.3■□□□□ 0.84
DDX39A-208ENST00000588692 BARGINQ6ZT62 677 aa20.29■□□□□ 0.84
DDX39A-208ENST00000588692 TMF1P82094 1093 aa20.28■□□□□ 0.84
DDX39A-208ENST00000588692 CRB1P82279 1406 aa20.28■□□□□ 0.84
DDX39A-208ENST00000588692 LARP1Q6PKG0 1096 aaKnown RBP20.28■□□□□ 0.84
DDX39A-208ENST00000588692 ZBTB7CA1YPR0 619 aa20.27■□□□□ 0.84
DDX39A-208ENST00000588692 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.27■□□□□ 0.84
DDX39A-208ENST00000588692 CCER1Q8TC90 406 aaPredicted RBP20.27■□□□□ 0.84
DDX39A-208ENST00000588692 THRAP3Q9Y2W1 955 aaKnown RBP20.27■□□□□ 0.84
DDX39A-208ENST00000588692 ARHGEF25Q86VW2 580 aa20.26■□□□□ 0.83
DDX39A-208ENST00000588692 TCP11L2Q8N4U5 519 aa20.26■□□□□ 0.83
DDX39A-208ENST00000588692 USP35Q9P2H5 1018 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms