RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 NWD2Q9ULI1 1742 aa14.95□□□□□ -0.02
TPM4-209ENST00000588483 RXRBP28702 533 aa14.94□□□□□ -0.02
TPM4-209ENST00000588483 CABP2Q9NPB3 220 aa14.94□□□□□ -0.02
TPM4-209ENST00000588483 USP21Q9UK80 565 aa14.94□□□□□ -0.02
TPM4-209ENST00000588483 RBM6P78332 1123 aaKnown RBP14.93□□□□□ -0.02
TPM4-209ENST00000588483 QTRT2Q9H974 415 aaKnown RBP14.93□□□□□ -0.02
TPM4-209ENST00000588483 TRPC5Q9UL62 973 aaPredicted RBP14.93□□□□□ -0.02
TPM4-209ENST00000588483 PLCH1Q4KWH8 1693 aa14.93□□□□□ -0.02
TPM4-209ENST00000588483 ATAD2Q6PL18 1390 aa14.92□□□□□ -0.02
TPM4-209ENST00000588483 PHRF1Q9P1Y6 1649 aaKnown RBP14.92□□□□□ -0.02
TPM4-209ENST00000588483 CABLES1Q8TDN4 633 aa14.91□□□□□ -0.02
TPM4-209ENST00000588483 USP6P35125 1406 aa14.91□□□□□ -0.02
TPM4-209ENST00000588483 SSH2Q76I76 1423 aa14.91□□□□□ -0.02
TPM4-209ENST00000588483 AKAP12Q02952 1782 aa14.9□□□□□ -0.02
TPM4-209ENST00000588483 LMOD2Q6P5Q4 547 aa14.9□□□□□ -0.02
TPM4-209ENST00000588483 PUS7Q96PZ0 661 aaKnown RBP14.9□□□□□ -0.02
TPM4-209ENST00000588483 COL14A1Q05707 1796 aaKnown RBP14.9□□□□□ -0.02
TPM4-209ENST00000588483 RGS12O14924 1447 aa14.9□□□□□ -0.02
TPM4-209ENST00000588483 UNC5CLQ8IV45 518 aa14.89□□□□□ -0.03
TPM4-209ENST00000588483 CABP1Q9NZU7 370 aa14.89□□□□□ -0.03
TPM4-209ENST00000588483 CPSF1Q10570 1443 aaKnown RBP14.89□□□□□ -0.03
TPM4-209ENST00000588483 USP19O94966 1318 aa14.89□□□□□ -0.03
TPM4-209ENST00000588483 NRAPQ86VF7 1730 aa14.89□□□□□ -0.03
TPM4-209ENST00000588483 PAK3O75914 559 aaPredicted RBP14.88□□□□□ -0.03
TPM4-209ENST00000588483 NRKQ7Z2Y5 1582 aa14.88□□□□□ -0.03
TPM4-209ENST00000588483 GLI3P10071 1580 aa14.87□□□□□ -0.03
TPM4-209ENST00000588483 SLC24A1O60721 1099 aa14.87□□□□□ -0.03
TPM4-209ENST00000588483 HAP1P54257 671 aaPredicted RBP14.87□□□□□ -0.03
TPM4-209ENST00000588483 TESK2Q96S53 571 aa14.87□□□□□ -0.03
TPM4-209ENST00000588483 FAM83GA6ND36 823 aa14.86□□□□□ -0.03
TPM4-209ENST00000588483 ZNF692Q9BU19 519 aaPredicted RBP14.86□□□□□ -0.03
TPM4-209ENST00000588483 MON2Q7Z3U7 1717 aa14.86□□□□□ -0.03
TPM4-209ENST00000588483 PIK3C2AO00443 1686 aa14.85□□□□□ -0.03
TPM4-209ENST00000588483 CD163L1Q9NR16 1453 aa14.85□□□□□ -0.03
TPM4-209ENST00000588483 VPS72Q15906 364 aa14.85□□□□□ -0.03
TPM4-209ENST00000588483 GJD4Q96KN9 370 aaPredicted RBP14.85□□□□□ -0.03
TPM4-209ENST00000588483 SLIT3O75094 1523 aa14.85□□□□□ -0.03
TPM4-209ENST00000588483 EP400Q96L91 3159 aa14.85□□□□□ -0.03
TPM4-209ENST00000588483 CPDO75976 1380 aa14.85□□□□□ -0.03
TPM4-209ENST00000588483 ST20-MTHFSA0A0A6YYL1 179 aa14.84□□□□□ -0.03
TPM4-209ENST00000588483 ABTB2Q8N961 1025 aa14.84□□□□□ -0.03
TPM4-209ENST00000588483 USP47Q96K76 1375 aa14.84□□□□□ -0.03
TPM4-209ENST00000588483 USP54Q70EL1 1684 aa14.84□□□□□ -0.03
TPM4-209ENST00000588483 NLRP13Q86W25 1043 aa14.83□□□□□ -0.04
TPM4-209ENST00000588483 NINLQ9Y2I6 1382 aa14.83□□□□□ -0.04
TPM4-209ENST00000588483 LMO7Q8WWI1 1683 aa14.82□□□□□ -0.04
TPM4-209ENST00000588483 TTC21AQ8NDW8 1320 aa14.82□□□□□ -0.04
TPM4-209ENST00000588483 KIAA0232Q92628 1395 aa14.82□□□□□ -0.04
TPM4-209ENST00000588483 ONECUT3O60422 494 aaPredicted RBP14.81□□□□□ -0.04
TPM4-209ENST00000588483 TTC21BQ7Z4L5 1316 aa14.81□□□□□ -0.04
TPM4-209ENST00000588483 PRDM11Q9NQV5 511 aa14.8□□□□□ -0.04
TPM4-209ENST00000588483 BTG4Q9NY30 223 aa14.8□□□□□ -0.04
TPM4-209ENST00000588483 KTN1Q86UP2 1357 aaKnown RBP14.8□□□□□ -0.04
TPM4-209ENST00000588483 PLEKHG5O94827 1062 aa14.79□□□□□ -0.04
TPM4-209ENST00000588483 GCP02774 474 aa14.79□□□□□ -0.04
TPM4-209ENST00000588483 NUTM2GQ5VZR2 741 aa14.79□□□□□ -0.04
TPM4-209ENST00000588483 CCER1Q8TC90 406 aaPredicted RBP14.79□□□□□ -0.04
TPM4-209ENST00000588483 EDC4Q6P2E9 1401 aaKnown RBP14.78□□□□□ -0.04
TPM4-209ENST00000588483 USP31Q70CQ4 1352 aa14.78□□□□□ -0.04
TPM4-209ENST00000588483 UPF1Q92900 1129 aaKnown RBP eCLIP14.78□□□□□ -0.04
TPM4-209ENST00000588483 A0A1W2PP64 1363 aa14.77□□□□□ -0.04
TPM4-209ENST00000588483 NLRP6P59044 892 aa14.77□□□□□ -0.05
TPM4-209ENST00000588483 CAMTA1Q9Y6Y1 1673 aa14.77□□□□□ -0.05
TPM4-209ENST00000588483 ABCC6O95255 1503 aa14.76□□□□□ -0.05
TPM4-209ENST00000588483 COL18A1P39060 1754 aa14.76□□□□□ -0.05
TPM4-209ENST00000588483 SPATA31A5Q5VU36 1347 aa14.76□□□□□ -0.05
TPM4-209ENST00000588483 SPATA31A7Q8IWB4 1347 aa14.76□□□□□ -0.05
TPM4-209ENST00000588483 ZC3H6P61129 1189 aaKnown RBP14.76□□□□□ -0.05
TPM4-209ENST00000588483 SLC12A5Q9H2X9 1139 aa14.76□□□□□ -0.05
TPM4-209ENST00000588483 THSD7AQ9UPZ6 1657 aa14.76□□□□□ -0.05
TPM4-209ENST00000588483 NFAT5O94916 1531 aa14.76□□□□□ -0.05
TPM4-209ENST00000588483 BRWD3Q6RI45 1802 aa14.76□□□□□ -0.05
TPM4-209ENST00000588483 AATKQ6ZMQ8 1374 aa14.75□□□□□ -0.05
TPM4-209ENST00000588483 TMF1P82094 1093 aa14.75□□□□□ -0.05
TPM4-209ENST00000588483 HDGFL2Q7Z4V5 671 aaPredicted RBP14.75□□□□□ -0.05
TPM4-209ENST00000588483 TERF2IPQ9NYB0 399 aa14.75□□□□□ -0.05
TPM4-209ENST00000588483 CHRNA2Q15822 529 aa14.74□□□□□ -0.05
TPM4-209ENST00000588483 KCNH5Q8NCM2 988 aa14.74□□□□□ -0.05
TPM4-209ENST00000588483 COL5A2P05997 1499 aaPredicted RBP14.74□□□□□ -0.05
TPM4-209ENST00000588483 ANKRD36BQ8N2N9 1353 aa14.73□□□□□ -0.05
TPM4-209ENST00000588483 CDCA8Q53HL2 280 aa14.73□□□□□ -0.05
TPM4-209ENST00000588483 TMC1Q8TDI8 760 aa14.73□□□□□ -0.05
TPM4-209ENST00000588483 SPATA31A1Q5TZJ5 1347 aa14.72□□□□□ -0.05
TPM4-209ENST00000588483 ARHGEF25Q86VW2 580 aa14.72□□□□□ -0.05
TPM4-209ENST00000588483 SEPT12Q8IYM1 358 aa14.72□□□□□ -0.05
TPM4-209ENST00000588483 OVOS2A0A0J9YW53 1432 aa14.72□□□□□ -0.05
TPM4-209ENST00000588483 OVOS2Q6IE36 1432 aa14.72□□□□□ -0.05
TPM4-209ENST00000588483 MYOM1P52179 1685 aa14.71□□□□□ -0.05
TPM4-209ENST00000588483 CCDC9Q9Y3X0 531 aaKnown RBP14.7□□□□□ -0.06
TPM4-209ENST00000588483 FAM98CQ17RN3 349 aaKnown RBP14.69□□□□□ -0.06
TPM4-209ENST00000588483 BARGINQ6ZT62 677 aa14.69□□□□□ -0.06
TPM4-209ENST00000588483 CRB1P82279 1406 aa14.68□□□□□ -0.06
TPM4-209ENST00000588483 NME9Q86XW9 330 aa14.68□□□□□ -0.06
TPM4-209ENST00000588483 CCDC125Q86Z20 511 aa14.68□□□□□ -0.06
TPM4-209ENST00000588483 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.68□□□□□ -0.06
TPM4-209ENST00000588483 THRAP3Q9Y2W1 955 aaKnown RBP14.68□□□□□ -0.06
TPM4-209ENST00000588483 LARP1Q6PKG0 1096 aaKnown RBP14.67□□□□□ -0.06
TPM4-209ENST00000588483 KRT27Q7Z3Y8 459 aa14.67□□□□□ -0.06
TPM4-209ENST00000588483 STRN4Q9NRL3 753 aa14.67□□□□□ -0.06
TPM4-209ENST00000588483 PARP4Q9UKK3 1724 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms