RNA–Protein interactions for RNA: ENST00000588428.5

NCLN-204, Transcript of nicalin, humanhuman

TSL 5

Gene NCLN, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-204ENST00000588428 PPIP5K1Q6PFW1 1433 aa29.94■■■□□ 2.38
NCLN-204ENST00000588428 ACEP12821 1306 aa29.94■■■□□ 2.38
NCLN-204ENST00000588428 EVC2Q86UK5 1308 aa29.93■■■□□ 2.38
NCLN-204ENST00000588428 CABLES1Q8TDN4 633 aa29.92■■■□□ 2.38
NCLN-204ENST00000588428 RGS12O14924 1447 aa29.91■■■□□ 2.38
NCLN-204ENST00000588428 HAP1P54257 671 aaPredicted RBP29.91■■■□□ 2.38
NCLN-204ENST00000588428 CABP2Q9NPB3 220 aa29.91■■■□□ 2.38
NCLN-204ENST00000588428 BRD4O60885 1362 aaPredicted RBP29.9■■■□□ 2.38
NCLN-204ENST00000588428 CARD11Q9BXL7 1154 aa29.89■■■□□ 2.38
NCLN-204ENST00000588428 CLSPNQ9HAW4 1339 aa29.89■■■□□ 2.38
NCLN-204ENST00000588428 PHRF1Q9P1Y6 1649 aaKnown RBP29.89■■■□□ 2.37
NCLN-204ENST00000588428 COL14A1Q05707 1796 aaKnown RBP29.87■■■□□ 2.37
NCLN-204ENST00000588428 UNC5CLQ8IV45 518 aa29.87■■■□□ 2.37
NCLN-204ENST00000588428 PAK3O75914 559 aaPredicted RBP29.86■■■□□ 2.37
NCLN-204ENST00000588428 NRAPQ86VF7 1730 aa29.85■■■□□ 2.37
NCLN-204ENST00000588428 AKAP12Q02952 1782 aa29.84■■■□□ 2.37
NCLN-204ENST00000588428 GLI3P10071 1580 aa29.81■■■□□ 2.36
NCLN-204ENST00000588428 USP6P35125 1406 aa29.81■■■□□ 2.36
NCLN-204ENST00000588428 ATAD2Q6PL18 1390 aa29.81■■■□□ 2.36
NCLN-204ENST00000588428 GJD4Q96KN9 370 aaPredicted RBP29.81■■■□□ 2.36
NCLN-204ENST00000588428 CABP1Q9NZU7 370 aa29.81■■■□□ 2.36
NCLN-204ENST00000588428 FAM83GA6ND36 823 aa29.79■■■□□ 2.36
NCLN-204ENST00000588428 TIMELESSQ9UNS1 1208 aa29.79■■■□□ 2.36
NCLN-204ENST00000588428 PLEKHG5O94827 1062 aa29.78■■■□□ 2.36
NCLN-204ENST00000588428 PCGF6Q9BYE7 350 aa29.78■■■□□ 2.36
NCLN-204ENST00000588428 NRKQ7Z2Y5 1582 aa29.77■■■□□ 2.36
NCLN-204ENST00000588428 SSH2Q76I76 1423 aa29.77■■■□□ 2.36
NCLN-204ENST00000588428 VPS72Q15906 364 aa29.76■■■□□ 2.35
NCLN-204ENST00000588428 USP19O94966 1318 aa29.75■■■□□ 2.35
NCLN-204ENST00000588428 ABTB2Q8N961 1025 aa29.74■■■□□ 2.35
NCLN-204ENST00000588428 MON2Q7Z3U7 1717 aa29.74■■■□□ 2.35
NCLN-204ENST00000588428 CPSF1Q10570 1443 aaKnown RBP29.72■■■□□ 2.35
NCLN-204ENST00000588428 UPF1Q92900 1129 aaKnown RBP eCLIP29.72■■■□□ 2.35
NCLN-204ENST00000588428 ZNF692Q9BU19 519 aaPredicted RBP29.72■■■□□ 2.35
NCLN-204ENST00000588428 PIK3C2AO00443 1686 aa29.72■■■□□ 2.35
NCLN-204ENST00000588428 PUS7Q96PZ0 661 aaKnown RBP29.71■■■□□ 2.35
NCLN-204ENST00000588428 KIAA0232Q92628 1395 aa29.7■■■□□ 2.35
NCLN-204ENST00000588428 NLRP13Q86W25 1043 aa29.7■■■□□ 2.35
NCLN-204ENST00000588428 PRDM11Q9NQV5 511 aa29.7■■■□□ 2.35
NCLN-204ENST00000588428 CPDO75976 1380 aa29.69■■■□□ 2.34
NCLN-204ENST00000588428 NUTM2GQ5VZR2 741 aa29.69■■■□□ 2.34
NCLN-204ENST00000588428 BTG4Q9NY30 223 aa29.69■■■□□ 2.34
NCLN-204ENST00000588428 SLIT3O75094 1523 aa29.68■■■□□ 2.34
NCLN-204ENST00000588428 BRWD3Q6RI45 1802 aa29.68■■■□□ 2.34
NCLN-204ENST00000588428 SLC24A1O60721 1099 aa29.67■■■□□ 2.34
NCLN-204ENST00000588428 LMO7Q8WWI1 1683 aa29.66■■■□□ 2.34
NCLN-204ENST00000588428 TESK2Q96S53 571 aa29.66■■■□□ 2.34
NCLN-204ENST00000588428 ONECUT3O60422 494 aaPredicted RBP29.65■■■□□ 2.34
NCLN-204ENST00000588428 TTC21AQ8NDW8 1320 aa29.64■■■□□ 2.34
NCLN-204ENST00000588428 USP54Q70EL1 1684 aa29.63■■■□□ 2.33
NCLN-204ENST00000588428 CD163L1Q9NR16 1453 aa29.63■■■□□ 2.33
NCLN-204ENST00000588428 ST20-MTHFSA0A0A6YYL1 179 aa29.63■■■□□ 2.33
NCLN-204ENST00000588428 TTC21BQ7Z4L5 1316 aa29.62■■■□□ 2.33
NCLN-204ENST00000588428 GCP02774 474 aa29.61■■■□□ 2.33
NCLN-204ENST00000588428 KTN1Q86UP2 1357 aaKnown RBP29.61■■■□□ 2.33
NCLN-204ENST00000588428 USP47Q96K76 1375 aa29.61■■■□□ 2.33
NCLN-204ENST00000588428 NLRP6P59044 892 aa29.6■■■□□ 2.33
NCLN-204ENST00000588428 ZC3H6P61129 1189 aaKnown RBP29.6■■■□□ 2.33
NCLN-204ENST00000588428 CCDC9Q9Y3X0 531 aaKnown RBP29.59■■■□□ 2.33
NCLN-204ENST00000588428 NINLQ9Y2I6 1382 aa29.59■■■□□ 2.33
NCLN-204ENST00000588428 SPATA31A5Q5VU36 1347 aa29.58■■■□□ 2.33
NCLN-204ENST00000588428 SPATA31A7Q8IWB4 1347 aa29.58■■■□□ 2.33
NCLN-204ENST00000588428 CAMTA1Q9Y6Y1 1673 aa29.57■■■□□ 2.32
NCLN-204ENST00000588428 CHRNA2Q15822 529 aa29.57■■■□□ 2.32
NCLN-204ENST00000588428 THSD7AQ9UPZ6 1657 aa29.56■■■□□ 2.32
NCLN-204ENST00000588428 SEPT12Q8IYM1 358 aa29.56■■■□□ 2.32
NCLN-204ENST00000588428 COL18A1P39060 1754 aa29.55■■■□□ 2.32
NCLN-204ENST00000588428 EP400Q96L91 3159 aa29.54■■■□□ 2.32
NCLN-204ENST00000588428 EDC4Q6P2E9 1401 aaKnown RBP29.53■■■□□ 2.32
NCLN-204ENST00000588428 USP31Q70CQ4 1352 aa29.52■■■□□ 2.32
NCLN-204ENST00000588428 SLC12A5Q9H2X9 1139 aa29.52■■■□□ 2.32
NCLN-204ENST00000588428 AATKQ6ZMQ8 1374 aa29.52■■■□□ 2.32
NCLN-204ENST00000588428 SPATA31A1Q5TZJ5 1347 aa29.51■■■□□ 2.32
NCLN-204ENST00000588428 HDGFL2Q7Z4V5 671 aaPredicted RBP29.51■■■□□ 2.31
NCLN-204ENST00000588428 CCER1Q8TC90 406 aaPredicted RBP29.51■■■□□ 2.31
NCLN-204ENST00000588428 TMC1Q8TDI8 760 aa29.51■■■□□ 2.31
NCLN-204ENST00000588428 TERF2IPQ9NYB0 399 aa29.51■■■□□ 2.31
NCLN-204ENST00000588428 A0A1W2PP64 1363 aa29.51■■■□□ 2.31
NCLN-204ENST00000588428 NFAT5O94916 1531 aa29.5■■■□□ 2.31
NCLN-204ENST00000588428 KCNH5Q8NCM2 988 aa29.5■■■□□ 2.31
NCLN-204ENST00000588428 COL5A2P05997 1499 aaPredicted RBP29.49■■■□□ 2.31
NCLN-204ENST00000588428 ABCC6O95255 1503 aa29.49■■■□□ 2.31
NCLN-204ENST00000588428 TMF1P82094 1093 aa29.48■■■□□ 2.31
NCLN-204ENST00000588428 FAM98CQ17RN3 349 aaKnown RBP29.48■■■□□ 2.31
NCLN-204ENST00000588428 CCDC125Q86Z20 511 aa29.48■■■□□ 2.31
NCLN-204ENST00000588428 STRN4Q9NRL3 753 aa29.47■■■□□ 2.31
NCLN-204ENST00000588428 EVA1CP58658 441 aa29.45■■■□□ 2.31
NCLN-204ENST00000588428 KRT27Q7Z3Y8 459 aa29.45■■■□□ 2.31
NCLN-204ENST00000588428 RGPD5Q99666 1765 aa29.44■■■□□ 2.3
NCLN-204ENST00000588428 ARHGEF25Q86VW2 580 aa29.43■■■□□ 2.3
NCLN-204ENST00000588428 CDCA8Q53HL2 280 aa29.42■■■□□ 2.3
NCLN-204ENST00000588428 BARGINQ6ZT62 677 aa29.42■■■□□ 2.3
NCLN-204ENST00000588428 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.42■■■□□ 2.3
NCLN-204ENST00000588428 ANKRD36BQ8N2N9 1353 aa29.41■■■□□ 2.3
NCLN-204ENST00000588428 BLMP54132 1417 aaPredicted RBP29.41■■■□□ 2.3
NCLN-204ENST00000588428 LARP1Q6PKG0 1096 aaKnown RBP29.41■■■□□ 2.3
NCLN-204ENST00000588428 OVOS2A0A0J9YW53 1432 aa29.4■■■□□ 2.3
NCLN-204ENST00000588428 CRB1P82279 1406 aa29.4■■■□□ 2.3
NCLN-204ENST00000588428 OVOS2Q6IE36 1432 aa29.4■■■□□ 2.3
NCLN-204ENST00000588428 LTN1O94822 1766 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms