RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 ABCA3Q99758 1704 aa31.15■■■□□ 2.58
CIRBP-219ENST00000588411 TOPAZ1Q8N9V7 1692 aa31.13■■■□□ 2.57
CIRBP-219ENST00000588411 QRICH2Q9H0J4 1663 aa31.13■■■□□ 2.57
CIRBP-219ENST00000588411 NBPF8Q3BBV2 869 aa31.13■■■□□ 2.57
CIRBP-219ENST00000588411 CABP2Q9NPB3 220 aa31.12■■■□□ 2.57
CIRBP-219ENST00000588411 ATAD2Q6PL18 1390 aa31.12■■■□□ 2.57
CIRBP-219ENST00000588411 EVC2Q86UK5 1308 aa31.11■■■□□ 2.57
CIRBP-219ENST00000588411 PPIP5K1Q6PFW1 1433 aa31.1■■■□□ 2.57
CIRBP-219ENST00000588411 FAM83GA6ND36 823 aa31.1■■■□□ 2.57
CIRBP-219ENST00000588411 RALGAPBQ86X10 1494 aa31.09■■■□□ 2.57
CIRBP-219ENST00000588411 VPS72Q15906 364 aa31.09■■■□□ 2.57
CIRBP-219ENST00000588411 NWD2Q9ULI1 1742 aa31.08■■■□□ 2.57
CIRBP-219ENST00000588411 CCDC9Q9Y3X0 531 aaKnown RBP31.08■■■□□ 2.57
CIRBP-219ENST00000588411 PLCH1Q4KWH8 1693 aa31.06■■■□□ 2.56
CIRBP-219ENST00000588411 PRDM11Q9NQV5 511 aa31.04■■■□□ 2.56
CIRBP-219ENST00000588411 CARD11Q9BXL7 1154 aa31.03■■■□□ 2.56
CIRBP-219ENST00000588411 BTG4Q9NY30 223 aa31.03■■■□□ 2.56
CIRBP-219ENST00000588411 BRD4O60885 1362 aaPredicted RBP31.03■■■□□ 2.56
CIRBP-219ENST00000588411 ABTB2Q8N961 1025 aa31.02■■■□□ 2.56
CIRBP-219ENST00000588411 COL14A1Q05707 1796 aaKnown RBP31.02■■■□□ 2.56
CIRBP-219ENST00000588411 GLI3P10071 1580 aa31.01■■■□□ 2.56
CIRBP-219ENST00000588411 CABP1Q9NZU7 370 aa31.01■■■□□ 2.55
CIRBP-219ENST00000588411 NUTM2GQ5VZR2 741 aa31■■■□□ 2.55
CIRBP-219ENST00000588411 CRYBG1Q9Y4K1 1723 aa30.98■■■□□ 2.55
CIRBP-219ENST00000588411 KIAA0232Q92628 1395 aa30.96■■■□□ 2.55
CIRBP-219ENST00000588411 NLRP13Q86W25 1043 aa30.96■■■□□ 2.55
CIRBP-219ENST00000588411 SBNO2Q9Y2G9 1366 aa30.94■■■□□ 2.54
CIRBP-219ENST00000588411 SEPT12Q8IYM1 358 aa30.94■■■□□ 2.54
CIRBP-219ENST00000588411 USP6P35125 1406 aa30.93■■■□□ 2.54
CIRBP-219ENST00000588411 PHRF1Q9P1Y6 1649 aaKnown RBP30.93■■■□□ 2.54
CIRBP-219ENST00000588411 NRAPQ86VF7 1730 aa30.93■■■□□ 2.54
CIRBP-219ENST00000588411 ONECUT3O60422 494 aaPredicted RBP30.92■■■□□ 2.54
CIRBP-219ENST00000588411 ZC3H6P61129 1189 aaKnown RBP30.92■■■□□ 2.54
CIRBP-219ENST00000588411 USP19O94966 1318 aa30.92■■■□□ 2.54
CIRBP-219ENST00000588411 A0A0G2JS52 829 aa30.91■■■□□ 2.54
CIRBP-219ENST00000588411 MYT1Q01538 1121 aa30.91■■■□□ 2.54
CIRBP-219ENST00000588411 CCDC125Q86Z20 511 aa30.91■■■□□ 2.54
CIRBP-219ENST00000588411 ZNF692Q9BU19 519 aaPredicted RBP30.9■■■□□ 2.54
CIRBP-219ENST00000588411 CHRNA2Q15822 529 aa30.89■■■□□ 2.54
CIRBP-219ENST00000588411 SPATA31A5Q5VU36 1347 aa30.87■■■□□ 2.53
CIRBP-219ENST00000588411 SPATA31A7Q8IWB4 1347 aa30.87■■■□□ 2.53
CIRBP-219ENST00000588411 CPDO75976 1380 aa30.87■■■□□ 2.53
CIRBP-219ENST00000588411 NLRP6P59044 892 aa30.86■■■□□ 2.53
CIRBP-219ENST00000588411 FAM98CQ17RN3 349 aaKnown RBP30.86■■■□□ 2.53
CIRBP-219ENST00000588411 NRKQ7Z2Y5 1582 aa30.86■■■□□ 2.53
CIRBP-219ENST00000588411 GCP02774 474 aa30.85■■■□□ 2.53
CIRBP-219ENST00000588411 KRT27Q7Z3Y8 459 aa30.85■■■□□ 2.53
CIRBP-219ENST00000588411 STRN4Q9NRL3 753 aa30.84■■■□□ 2.53
CIRBP-219ENST00000588411 EVA1CP58658 441 aa30.83■■■□□ 2.53
CIRBP-219ENST00000588411 SSH2Q76I76 1423 aa30.82■■■□□ 2.52
CIRBP-219ENST00000588411 EP400Q96L91 3159 aa30.8■■■□□ 2.52
CIRBP-219ENST00000588411 TTC21BQ7Z4L5 1316 aa30.79■■■□□ 2.52
CIRBP-219ENST00000588411 TTC21AQ8NDW8 1320 aa30.79■■■□□ 2.52
CIRBP-219ENST00000588411 SLC24A1O60721 1099 aa30.79■■■□□ 2.52
CIRBP-219ENST00000588411 SPATA31A1Q5TZJ5 1347 aa30.78■■■□□ 2.52
CIRBP-219ENST00000588411 BLMP54132 1417 aaPredicted RBP30.78■■■□□ 2.52
CIRBP-219ENST00000588411 CPSF1Q10570 1443 aaKnown RBP30.78■■■□□ 2.52
CIRBP-219ENST00000588411 KTN1Q86UP2 1357 aaKnown RBP30.78■■■□□ 2.52
CIRBP-219ENST00000588411 BRWD3Q6RI45 1802 aa30.77■■■□□ 2.52
CIRBP-219ENST00000588411 SF3B2Q13435 895 aaKnown RBP30.77■■■□□ 2.52
CIRBP-219ENST00000588411 SLIT3O75094 1523 aa30.75■■■□□ 2.51
CIRBP-219ENST00000588411 TMC1Q8TDI8 760 aa30.75■■■□□ 2.51
CIRBP-219ENST00000588411 PUS7Q96PZ0 661 aaKnown RBP30.75■■■□□ 2.51
CIRBP-219ENST00000588411 CLSPNQ9HAW4 1339 aa30.74■■■□□ 2.51
CIRBP-219ENST00000588411 PCGF6Q9BYE7 350 aa30.74■■■□□ 2.51
CIRBP-219ENST00000588411 AKAP12Q02952 1782 aa30.74■■■□□ 2.51
CIRBP-219ENST00000588411 ZBTB7CA1YPR0 619 aa30.73■■■□□ 2.51
CIRBP-219ENST00000588411 HDGFL2Q7Z4V5 671 aaPredicted RBP30.73■■■□□ 2.51
CIRBP-219ENST00000588411 KCNH5Q8NCM2 988 aa30.73■■■□□ 2.51
CIRBP-219ENST00000588411 PIK3C2AO00443 1686 aa30.73■■■□□ 2.51
CIRBP-219ENST00000588411 CAMTA1Q9Y6Y1 1673 aa30.72■■■□□ 2.51
CIRBP-219ENST00000588411 TIMELESSQ9UNS1 1208 aa30.72■■■□□ 2.51
CIRBP-219ENST00000588411 ST20-MTHFSA0A0A6YYL1 179 aa30.71■■■□□ 2.51
CIRBP-219ENST00000588411 USP35Q9P2H5 1018 aa30.71■■■□□ 2.51
CIRBP-219ENST00000588411 LMO7Q8WWI1 1683 aa30.71■■■□□ 2.51
CIRBP-219ENST00000588411 AATKQ6ZMQ8 1374 aa30.7■■■□□ 2.51
CIRBP-219ENST00000588411 TERF2IPQ9NYB0 399 aa30.7■■■□□ 2.51
CIRBP-219ENST00000588411 LARP1Q6PKG0 1096 aaKnown RBP30.69■■■□□ 2.5
CIRBP-219ENST00000588411 THSD7AQ9UPZ6 1657 aa30.68■■■□□ 2.5
CIRBP-219ENST00000588411 BARGINQ6ZT62 677 aa30.68■■■□□ 2.5
CIRBP-219ENST00000588411 TCP11L2Q8N4U5 519 aa30.68■■■□□ 2.5
CIRBP-219ENST00000588411 TESK2Q96S53 571 aa30.67■■■□□ 2.5
CIRBP-219ENST00000588411 COL5A2P05997 1499 aaPredicted RBP30.67■■■□□ 2.5
CIRBP-219ENST00000588411 SLC12A5Q9H2X9 1139 aa30.66■■■□□ 2.5
CIRBP-219ENST00000588411 THRAP3Q9Y2W1 955 aaKnown RBP30.66■■■□□ 2.5
CIRBP-219ENST00000588411 NINLQ9Y2I6 1382 aa30.66■■■□□ 2.5
CIRBP-219ENST00000588411 MON2Q7Z3U7 1717 aa30.65■■■□□ 2.5
CIRBP-219ENST00000588411 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.65■■■□□ 2.5
CIRBP-219ENST00000588411 ZRANB1Q9UGI0 708 aa30.64■■■□□ 2.5
CIRBP-219ENST00000588411 USP47Q96K76 1375 aa30.64■■■□□ 2.5
CIRBP-219ENST00000588411 SOX12O15370 315 aa30.63■■■□□ 2.49
CIRBP-219ENST00000588411 CD163L1Q9NR16 1453 aa30.63■■■□□ 2.49
CIRBP-219ENST00000588411 ARHGEF25Q86VW2 580 aa30.62■■■□□ 2.49
CIRBP-219ENST00000588411 EDC4Q6P2E9 1401 aaKnown RBP30.62■■■□□ 2.49
CIRBP-219ENST00000588411 USP31Q70CQ4 1352 aa30.61■■■□□ 2.49
CIRBP-219ENST00000588411 CRB1P82279 1406 aa30.61■■■□□ 2.49
CIRBP-219ENST00000588411 A0A1W2PP64 1363 aa30.59■■■□□ 2.49
CIRBP-219ENST00000588411 BAG6P46379 1132 aa30.59■■■□□ 2.49
CIRBP-219ENST00000588411 TMF1P82094 1093 aa30.59■■■□□ 2.49
CIRBP-219ENST00000588411 PDE3BQ13370 1112 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms