RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 PAK3O75914 559 aaPredicted RBP23.14■■□□□ 1.29
ERCC1-206ENST00000588300 NUDT16Q96DE0 195 aaKnown RBP23.14■■□□□ 1.29
ERCC1-206ENST00000588300 ONECUT3O60422 494 aaPredicted RBP23.13■■□□□ 1.29
ERCC1-206ENST00000588300 ZRANB1Q9UGI0 708 aa23.13■■□□□ 1.29
ERCC1-206ENST00000588300 TOPAZ1Q8N9V7 1692 aa23.13■■□□□ 1.29
ERCC1-206ENST00000588300 BTG4Q9NY30 223 aa23.12■■□□□ 1.29
ERCC1-206ENST00000588300 CDK19Q9BWU1 502 aa23.1■■□□□ 1.29
ERCC1-206ENST00000588300 KRT27Q7Z3Y8 459 aa23.09■■□□□ 1.29
ERCC1-206ENST00000588300 PHRF1Q9P1Y6 1649 aaKnown RBP23.08■■□□□ 1.29
ERCC1-206ENST00000588300 A0A0G2JS52 829 aa23.08■■□□□ 1.29
ERCC1-206ENST00000588300 MYT1Q01538 1121 aa23.08■■□□□ 1.29
ERCC1-206ENST00000588300 SF3B2Q13435 895 aaKnown RBP23.07■■□□□ 1.28
ERCC1-206ENST00000588300 POLR3AO14802 1390 aaPredicted RBP23.06■■□□□ 1.28
ERCC1-206ENST00000588300 FAM98CQ17RN3 349 aaKnown RBP23.06■■□□□ 1.28
ERCC1-206ENST00000588300 PRDM11Q9NQV5 511 aa23.06■■□□□ 1.28
ERCC1-206ENST00000588300 NBPF1Q3BBV0 1214 aa23.05■■□□□ 1.28
ERCC1-206ENST00000588300 CCDC61Q9Y6R9 512 aa23.05■■□□□ 1.28
ERCC1-206ENST00000588300 ACEP12821 1306 aa23.04■■□□□ 1.28
ERCC1-206ENST00000588300 PLEKHG3A1L390 1219 aa23.02■■□□□ 1.28
ERCC1-206ENST00000588300 DEFB132Q7Z7B7 95 aa23.02■■□□□ 1.28
ERCC1-206ENST00000588300 SPATA31A5Q5VU36 1347 aa23.02■■□□□ 1.28
ERCC1-206ENST00000588300 SPATA31A7Q8IWB4 1347 aa23.02■■□□□ 1.28
ERCC1-206ENST00000588300 KIAA0232Q92628 1395 aa23.01■■□□□ 1.27
ERCC1-206ENST00000588300 NBPF8Q3BBV2 869 aa23.01■■□□□ 1.27
ERCC1-206ENST00000588300 CENPJQ9HC77 1338 aaPredicted RBP23.01■■□□□ 1.27
ERCC1-206ENST00000588300 QRICH2Q9H0J4 1663 aa23■■□□□ 1.27
ERCC1-206ENST00000588300 THSD7AQ9UPZ6 1657 aa23■■□□□ 1.27
ERCC1-206ENST00000588300 NUTM2GQ5VZR2 741 aa22.99■■□□□ 1.27
ERCC1-206ENST00000588300 SRPK2P78362 688 aaKnown RBP22.98■■□□□ 1.27
ERCC1-206ENST00000588300 PPIP5K1Q6PFW1 1433 aa22.98■■□□□ 1.27
ERCC1-206ENST00000588300 NRKQ7Z2Y5 1582 aa22.97■■□□□ 1.27
ERCC1-206ENST00000588300 ZC3H6P61129 1189 aaKnown RBP22.97■■□□□ 1.27
ERCC1-206ENST00000588300 CHRNA2Q15822 529 aa22.97■■□□□ 1.27
ERCC1-206ENST00000588300 RGPD1P0DJD0 1748 aa22.96■■□□□ 1.27
ERCC1-206ENST00000588300 ABTB2Q8N961 1025 aa22.96■■□□□ 1.27
ERCC1-206ENST00000588300 BAG6P46379 1132 aa22.95■■□□□ 1.26
ERCC1-206ENST00000588300 TRPM1Q7Z4N2 1603 aa22.94■■□□□ 1.26
ERCC1-206ENST00000588300 SPATA31A1Q5TZJ5 1347 aa22.94■■□□□ 1.26
ERCC1-206ENST00000588300 L3MBTL2Q969R5 705 aa22.94■■□□□ 1.26
ERCC1-206ENST00000588300 CABP2Q9NPB3 220 aa22.94■■□□□ 1.26
ERCC1-206ENST00000588300 STRN4Q9NRL3 753 aa22.94■■□□□ 1.26
ERCC1-206ENST00000588300 SRCAPQ6ZRS2 3230 aa22.94■■□□□ 1.26
ERCC1-206ENST00000588300 BRD4O60885 1362 aaPredicted RBP22.92■■□□□ 1.26
ERCC1-206ENST00000588300 USP19O94966 1318 aa22.92■■□□□ 1.26
ERCC1-206ENST00000588300 SSH2Q76I76 1423 aa22.91■■□□□ 1.26
ERCC1-206ENST00000588300 LMO7Q8WWI1 1683 aa22.9■■□□□ 1.26
ERCC1-206ENST00000588300 CPDO75976 1380 aa22.9■■□□□ 1.26
ERCC1-206ENST00000588300 FAM182BQ5T319 152 aa22.9■■□□□ 1.26
ERCC1-206ENST00000588300 NLRP13Q86W25 1043 aa22.9■■□□□ 1.26
ERCC1-206ENST00000588300 TNS1Q9HBL0 1735 aaKnown RBP22.89■■□□□ 1.26
ERCC1-206ENST00000588300 EVA1CP58658 441 aa22.89■■□□□ 1.25
ERCC1-206ENST00000588300 CAMTA1Q9Y6Y1 1673 aa22.89■■□□□ 1.25
ERCC1-206ENST00000588300 SIN3AQ96ST3 1273 aa22.88■■□□□ 1.25
ERCC1-206ENST00000588300 USP35Q9P2H5 1018 aa22.87■■□□□ 1.25
ERCC1-206ENST00000588300 USP6P35125 1406 aa22.87■■□□□ 1.25
ERCC1-206ENST00000588300 GCP02774 474 aa22.86■■□□□ 1.25
ERCC1-206ENST00000588300 CABP1Q9NZU7 370 aa22.86■■□□□ 1.25
ERCC1-206ENST00000588300 EVC2Q86UK5 1308 aa22.85■■□□□ 1.25
ERCC1-206ENST00000588300 DISP2A7MBM2 1401 aa22.85■■□□□ 1.25
ERCC1-206ENST00000588300 NEUROD1Q13562 356 aa22.85■■□□□ 1.25
ERCC1-206ENST00000588300 BARGINQ6ZT62 677 aa22.85■■□□□ 1.25
ERCC1-206ENST00000588300 ROCK2O75116 1388 aaKnown RBP22.85■■□□□ 1.25
ERCC1-206ENST00000588300 EN1Q05925 392 aaPredicted RBP22.84■■□□□ 1.25
ERCC1-206ENST00000588300 LRP5O75197 1615 aa22.83■■□□□ 1.25
ERCC1-206ENST00000588300 LARP1Q6PKG0 1096 aaKnown RBP22.83■■□□□ 1.25
ERCC1-206ENST00000588300 FAM196AQ6ZSG2 479 aa22.83■■□□□ 1.25
ERCC1-206ENST00000588300 SLIT3O75094 1523 aa22.82■■□□□ 1.24
ERCC1-206ENST00000588300 TCP11L2Q8N4U5 519 aa22.82■■□□□ 1.24
ERCC1-206ENST00000588300 PIK3C2AO00443 1686 aa22.81■■□□□ 1.24
ERCC1-206ENST00000588300 COL5A2P05997 1499 aaPredicted RBP22.81■■□□□ 1.24
ERCC1-206ENST00000588300 NLRP6P59044 892 aa22.81■■□□□ 1.24
ERCC1-206ENST00000588300 PDE3BQ13370 1112 aa22.8■■□□□ 1.24
ERCC1-206ENST00000588300 THRAP3Q9Y2W1 955 aaKnown RBP22.8■■□□□ 1.24
ERCC1-206ENST00000588300 AKAP12Q02952 1782 aa22.79■■□□□ 1.24
ERCC1-206ENST00000588300 PSDA5PKW4 1024 aaPredicted RBP22.79■■□□□ 1.24
ERCC1-206ENST00000588300 TRIM37O94972 964 aa22.78■■□□□ 1.24
ERCC1-206ENST00000588300 PARP4Q9UKK3 1724 aaKnown RBP22.78■■□□□ 1.24
ERCC1-206ENST00000588300 CRB1P82279 1406 aa22.77■■□□□ 1.24
ERCC1-206ENST00000588300 ZBTB7CA1YPR0 619 aa22.77■■□□□ 1.24
ERCC1-206ENST00000588300 AATKQ6ZMQ8 1374 aa22.76■■□□□ 1.23
ERCC1-206ENST00000588300 EZH2Q15910 746 aaKnown RBP22.75■■□□□ 1.23
ERCC1-206ENST00000588300 ZNF692Q9BU19 519 aaPredicted RBP22.75■■□□□ 1.23
ERCC1-206ENST00000588300 PARD3Q8TEW0 1356 aa22.74■■□□□ 1.23
ERCC1-206ENST00000588300 COL18A1P39060 1754 aa22.73■■□□□ 1.23
ERCC1-206ENST00000588300 APBA3O96018 575 aa22.73■■□□□ 1.23
ERCC1-206ENST00000588300 CAMKK2Q96RR4 588 aa22.73■■□□□ 1.23
ERCC1-206ENST00000588300 TTC21BQ7Z4L5 1316 aa22.73■■□□□ 1.23
ERCC1-206ENST00000588300 RREB1Q92766 1687 aa22.71■■□□□ 1.23
ERCC1-206ENST00000588300 R3HDM1Q15032 1099 aaKnown RBP22.71■■□□□ 1.23
ERCC1-206ENST00000588300 TTC21AQ8NDW8 1320 aa22.71■■□□□ 1.23
ERCC1-206ENST00000588300 SBNO2Q9Y2G9 1366 aa22.71■■□□□ 1.23
ERCC1-206ENST00000588300 CPSF1Q10570 1443 aaKnown RBP22.71■■□□□ 1.23
ERCC1-206ENST00000588300 KCNH5Q8NCM2 988 aa22.7■■□□□ 1.22
ERCC1-206ENST00000588300 LRRC37A3O60309 1634 aa22.7■■□□□ 1.22
ERCC1-206ENST00000588300 MON2Q7Z3U7 1717 aa22.7■■□□□ 1.22
ERCC1-206ENST00000588300 WNK3Q9BYP7 1800 aa22.7■■□□□ 1.22
ERCC1-206ENST00000588300 KTN1Q86UP2 1357 aaKnown RBP22.69■■□□□ 1.22
ERCC1-206ENST00000588300 C11orf95C9JLR9 678 aaPredicted RBP22.69■■□□□ 1.22
ERCC1-206ENST00000588300 TOM1L2Q6ZVM7 507 aa22.69■■□□□ 1.22
ERCC1-206ENST00000588300 OVOS2A0A0G2JMS6 1433 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms