RNA–Protein interactions for RNA: ENST00000588289.1

TMED1-204, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2 BASIC

Gene TMED1, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-204ENST00000588289 NRKQ7Z2Y5 1582 aa16.97■□□□□ 0.31
TMED1-204ENST00000588289 USP6P35125 1406 aa16.96■□□□□ 0.3
TMED1-204ENST00000588289 POLR3AO14802 1390 aaPredicted RBP16.95■□□□□ 0.3
TMED1-204ENST00000588289 COG3Q96JB2 828 aa16.95■□□□□ 0.3
TMED1-204ENST00000588289 ACEP12821 1306 aa16.95■□□□□ 0.3
TMED1-204ENST00000588289 PRR36Q9H6K5 1346 aa16.95■□□□□ 0.3
TMED1-204ENST00000588289 SCAF1Q9H7N4 1312 aaKnown RBP16.95■□□□□ 0.3
TMED1-204ENST00000588289 CADPS2Q86UW7 1296 aa16.94■□□□□ 0.3
TMED1-204ENST00000588289 STRCP1A6NGW2 1772 aa16.94■□□□□ 0.3
TMED1-204ENST00000588289 HNRNPUQ00839 825 aaKnown RBP eCLIP16.93■□□□□ 0.3
TMED1-204ENST00000588289 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.93■□□□□ 0.3
TMED1-204ENST00000588289 PNISRQ8TF01 805 aaKnown RBP16.93■□□□□ 0.3
TMED1-204ENST00000588289 MAP2P11137 1827 aaKnown RBP16.93■□□□□ 0.3
TMED1-204ENST00000588289 NUTM2FA1L443 756 aa16.92■□□□□ 0.3
TMED1-204ENST00000588289 FYB1O15117 783 aa16.92■□□□□ 0.3
TMED1-204ENST00000588289 PHF8Q9UPP1 1060 aa16.92■□□□□ 0.3
TMED1-204ENST00000588289 TMEM94Q12767 1356 aa16.91■□□□□ 0.3
TMED1-204ENST00000588289 GGNBP2Q9H3C7 697 aa16.91■□□□□ 0.3
TMED1-204ENST00000588289 NUDCQ9Y266 331 aa16.91■□□□□ 0.3
TMED1-204ENST00000588289 PHF23Q9BUL5 403 aaPredicted RBP16.9■□□□□ 0.3
TMED1-204ENST00000588289 PNNQ9H307 717 aaKnown RBP16.89■□□□□ 0.29
TMED1-204ENST00000588289 TTC21BQ7Z4L5 1316 aa16.89■□□□□ 0.29
TMED1-204ENST00000588289 USP54Q70EL1 1684 aa16.88■□□□□ 0.29
TMED1-204ENST00000588289 LRRC7Q96NW7 1537 aa16.88■□□□□ 0.29
TMED1-204ENST00000588289 TNNT2P45379 298 aaPredicted RBP16.88■□□□□ 0.29
TMED1-204ENST00000588289 PIP4K2BP78356 416 aa16.88■□□□□ 0.29
TMED1-204ENST00000588289 PSME1Q06323 249 aa16.88■□□□□ 0.29
TMED1-204ENST00000588289 ESCO1Q5FWF5 840 aa16.88■□□□□ 0.29
TMED1-204ENST00000588289 PMFBP1Q8TBY8 1022 aa16.88■□□□□ 0.29
TMED1-204ENST00000588289 AATKQ6ZMQ8 1374 aa16.88■□□□□ 0.29
TMED1-204ENST00000588289 XIRP1Q702N8 1843 aaKnown RBP16.87■□□□□ 0.29
TMED1-204ENST00000588289 CCDC184Q52MB2 194 aa16.87■□□□□ 0.29
TMED1-204ENST00000588289 NGEFQ8N5V2 710 aa16.87■□□□□ 0.29
TMED1-204ENST00000588289 ZBED9Q6R2W3 1325 aa16.87■□□□□ 0.29
TMED1-204ENST00000588289 RGS17Q9UGC6 210 aaPredicted RBP16.86■□□□□ 0.29
TMED1-204ENST00000588289 C1orf167Q5SNV9 1468 aa16.86■□□□□ 0.29
TMED1-204ENST00000588289 NEFMP07197 916 aa16.84■□□□□ 0.29
TMED1-204ENST00000588289 MTHFSP49914 203 aa16.84■□□□□ 0.29
TMED1-204ENST00000588289 PAK3O75914 559 aaPredicted RBP16.83■□□□□ 0.28
TMED1-204ENST00000588289 BLMP54132 1417 aaPredicted RBP16.83■□□□□ 0.28
TMED1-204ENST00000588289 USP31Q70CQ4 1352 aa16.83■□□□□ 0.28
TMED1-204ENST00000588289 NME9Q86XW9 330 aa16.83■□□□□ 0.28
TMED1-204ENST00000588289 CDK12Q9NYV4 1490 aaPredicted RBP16.83■□□□□ 0.28
TMED1-204ENST00000588289 PIK3C2AO00443 1686 aa16.82■□□□□ 0.28
TMED1-204ENST00000588289 OVOS2A0A0J9YW53 1432 aa16.82■□□□□ 0.28
TMED1-204ENST00000588289 OVOS2Q6IE36 1432 aa16.82■□□□□ 0.28
TMED1-204ENST00000588289 SSH2Q76I76 1423 aa16.82■□□□□ 0.28
TMED1-204ENST00000588289 MST1RQ04912 1400 aa16.81■□□□□ 0.28
TMED1-204ENST00000588289 SMG6Q86US8 1419 aaKnown RBP16.81■□□□□ 0.28
TMED1-204ENST00000588289 NPHP3Q7Z494 1330 aa16.81■□□□□ 0.28
TMED1-204ENST00000588289 RBM33Q96EV2 1170 aaKnown RBP16.81■□□□□ 0.28
TMED1-204ENST00000588289 SHPRHQ149N8 1683 aa16.81■□□□□ 0.28
TMED1-204ENST00000588289 ABTB2Q8N961 1025 aa16.8■□□□□ 0.28
TMED1-204ENST00000588289 KIF24Q5T7B8 1368 aa16.79■□□□□ 0.28
TMED1-204ENST00000588289 DIAPH1O60610 1272 aaKnown RBP16.79■□□□□ 0.28
TMED1-204ENST00000588289 NLRP6P59044 892 aa16.79■□□□□ 0.28
TMED1-204ENST00000588289 KCNH5Q8NCM2 988 aa16.79■□□□□ 0.28
TMED1-204ENST00000588289 TOM1O60784 492 aa16.78■□□□□ 0.28
TMED1-204ENST00000588289 PDE3BQ13370 1112 aa16.78■□□□□ 0.28
TMED1-204ENST00000588289 PPM1GO15355 546 aaPredicted RBP16.77■□□□□ 0.28
TMED1-204ENST00000588289 SRCAPQ6ZRS2 3230 aa16.77■□□□□ 0.27
TMED1-204ENST00000588289 TRPM3Q9HCF6 1732 aaPredicted RBP16.76■□□□□ 0.27
TMED1-204ENST00000588289 ADAMTS8Q9UP79 889 aa16.76■□□□□ 0.27
TMED1-204ENST00000588289 LTN1O94822 1766 aa16.75■□□□□ 0.27
TMED1-204ENST00000588289 SBNO1A3KN83 1393 aa16.75■□□□□ 0.27
TMED1-204ENST00000588289 PNPLA6Q8IY17 1366 aa16.75■□□□□ 0.27
TMED1-204ENST00000588289 MAPK8IP3Q9UPT6 1336 aa16.74■□□□□ 0.27
TMED1-204ENST00000588289 U2SURPO15042 1029 aaKnown RBP16.74■□□□□ 0.27
TMED1-204ENST00000588289 FOXO3O43524 673 aa16.74■□□□□ 0.27
TMED1-204ENST00000588289 U2AF1L5P0DN76 240 aaPredicted RBP16.74■□□□□ 0.27
TMED1-204ENST00000588289 U2AF1Q01081 240 aaKnown RBP eCLIP16.74■□□□□ 0.27
TMED1-204ENST00000588289 KRT28Q7Z3Y7 464 aa16.74■□□□□ 0.27
TMED1-204ENST00000588289 ORAI2Q96SN7 254 aa16.74■□□□□ 0.27
TMED1-204ENST00000588289 POLKQ9UBT6 870 aa16.74■□□□□ 0.27
TMED1-204ENST00000588289 RTL1A6NKG5 1358 aa16.74■□□□□ 0.27
TMED1-204ENST00000588289 ARHGEF10O15013 1369 aa16.74■□□□□ 0.27
TMED1-204ENST00000588289 FLT4P35916 1363 aa16.74■□□□□ 0.27
TMED1-204ENST00000588289 RUNDC1Q96C34 613 aa16.73■□□□□ 0.27
TMED1-204ENST00000588289 COL3A1P02461 1466 aaPredicted RBP16.73■□□□□ 0.27
TMED1-204ENST00000588289 ALS2Q96Q42 1657 aa16.72■□□□□ 0.27
TMED1-204ENST00000588289 AMPHP49418 695 aa16.72■□□□□ 0.27
TMED1-204ENST00000588289 NCBP3Q53F19 620 aaKnown RBP16.72■□□□□ 0.27
TMED1-204ENST00000588289 SLAIN2Q9P270 581 aa16.72■□□□□ 0.27
TMED1-204ENST00000588289 MARF1Q9Y4F3 1742 aaKnown RBP16.71■□□□□ 0.27
TMED1-204ENST00000588289 PHRF1Q9P1Y6 1649 aaKnown RBP16.7■□□□□ 0.26
TMED1-204ENST00000588289 LMOD2Q6P5Q4 547 aa16.7■□□□□ 0.26
TMED1-204ENST00000588289 TNS3Q68CZ2 1445 aa16.7■□□□□ 0.26
TMED1-204ENST00000588289 FCHSD2O94868 740 aa16.69■□□□□ 0.26
TMED1-204ENST00000588289 NEFLP07196 543 aa16.69■□□□□ 0.26
TMED1-204ENST00000588289 POTEAQ6S8J7 498 aa16.68■□□□□ 0.26
TMED1-204ENST00000588289 ZRANB1Q9UGI0 708 aa16.68■□□□□ 0.26
TMED1-204ENST00000588289 EMILIN1Q9Y6C2 1016 aa16.68■□□□□ 0.26
TMED1-204ENST00000588289 SLIT3O75094 1523 aa16.68■□□□□ 0.26
TMED1-204ENST00000588289 NHSL1Q5SYE7 1610 aa16.67■□□□□ 0.26
TMED1-204ENST00000588289 RRS1Q15050 365 aaKnown RBP16.67■□□□□ 0.26
TMED1-204ENST00000588289 SOX12O15370 315 aa16.66■□□□□ 0.26
TMED1-204ENST00000588289 ABCC6O95255 1503 aa16.65■□□□□ 0.26
TMED1-204ENST00000588289 BRINP3Q76B58 766 aa16.65■□□□□ 0.26
TMED1-204ENST00000588289 PXDNQ92626 1479 aa16.65■□□□□ 0.26
TMED1-204ENST00000588289 MAP3K19Q56UN5 1328 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms