RNA–Protein interactions for RNA: ENST00000588166.1

KDM4B-204, Transcript of lysine demethylase 4B, humanhuman

TSL 5

Gene KDM4B, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-204ENST00000588166 MINK1Q8N4C8 1332 aaPredicted RBP21.32■■□□□ 1
KDM4B-204ENST00000588166 WASLO00401 505 aaPredicted RBP21.32■■□□□ 1
KDM4B-204ENST00000588166 GPRASP1Q5JY77 1395 aa21.32■■□□□ 1
KDM4B-204ENST00000588166 ARHGEF28Q8N1W1 1705 aaKnown RBP21.31■■□□□ 1
KDM4B-204ENST00000588166 SPATA31A5Q5VU36 1347 aa21.29■■□□□ 1
KDM4B-204ENST00000588166 SPATA31A7Q8IWB4 1347 aa21.29■■□□□ 1
KDM4B-204ENST00000588166 RGPD1P0DJD0 1748 aa21.29■■□□□ 1
KDM4B-204ENST00000588166 ATP7BP35670 1465 aa21.28■■□□□ 1
KDM4B-204ENST00000588166 ITSN1Q15811 1721 aa21.28■■□□□ 1
KDM4B-204ENST00000588166 TNS1Q9HBL0 1735 aaKnown RBP21.27■■□□□ 1
KDM4B-204ENST00000588166 A0A0G2JS52 829 aa21.26■□□□□ 0.99
KDM4B-204ENST00000588166 BAG6P46379 1132 aa21.26■□□□□ 0.99
KDM4B-204ENST00000588166 MYT1Q01538 1121 aa21.26■□□□□ 0.99
KDM4B-204ENST00000588166 DCAF11Q8TEB1 546 aa21.26■□□□□ 0.99
KDM4B-204ENST00000588166 KDM2AQ9Y2K7 1162 aa21.26■□□□□ 0.99
KDM4B-204ENST00000588166 PHRF1Q9P1Y6 1649 aaKnown RBP21.26■□□□□ 0.99
KDM4B-204ENST00000588166 DISP2A7MBM2 1401 aa21.25■□□□□ 0.99
KDM4B-204ENST00000588166 PSDA5PKW4 1024 aaPredicted RBP21.24■□□□□ 0.99
KDM4B-204ENST00000588166 FAM182BQ5T319 152 aa21.24■□□□□ 0.99
KDM4B-204ENST00000588166 NGDNQ8NEJ9 315 aaKnown RBP21.24■□□□□ 0.99
KDM4B-204ENST00000588166 STAC3Q96MF2 364 aa21.24■□□□□ 0.99
KDM4B-204ENST00000588166 TOPAZ1Q8N9V7 1692 aa21.23■□□□□ 0.99
KDM4B-204ENST00000588166 EN1Q05925 392 aaPredicted RBP21.22■□□□□ 0.99
KDM4B-204ENST00000588166 PRDM11Q9NQV5 511 aa21.22■□□□□ 0.99
KDM4B-204ENST00000588166 KIAA0232Q92628 1395 aa21.22■□□□□ 0.99
KDM4B-204ENST00000588166 PAK3O75914 559 aaPredicted RBP21.21■□□□□ 0.99
KDM4B-204ENST00000588166 NUDT16Q96DE0 195 aaKnown RBP21.21■□□□□ 0.99
KDM4B-204ENST00000588166 PCGF6Q9BYE7 350 aa21.21■□□□□ 0.99
KDM4B-204ENST00000588166 SPATA31A1Q5TZJ5 1347 aa21.21■□□□□ 0.99
KDM4B-204ENST00000588166 POLR3AO14802 1390 aaPredicted RBP21.19■□□□□ 0.98
KDM4B-204ENST00000588166 CHRNA2Q15822 529 aa21.17■□□□□ 0.98
KDM4B-204ENST00000588166 NRKQ7Z2Y5 1582 aa21.16■□□□□ 0.98
KDM4B-204ENST00000588166 KIAA1210Q9ULL0 1709 aa21.15■□□□□ 0.98
KDM4B-204ENST00000588166 CDK19Q9BWU1 502 aa21.15■□□□□ 0.98
KDM4B-204ENST00000588166 LMO7Q8WWI1 1683 aa21.15■□□□□ 0.98
KDM4B-204ENST00000588166 ACEP12821 1306 aa21.13■□□□□ 0.97
KDM4B-204ENST00000588166 CAMTA1Q9Y6Y1 1673 aa21.13■□□□□ 0.97
KDM4B-204ENST00000588166 ZC3H6P61129 1189 aaKnown RBP21.13■□□□□ 0.97
KDM4B-204ENST00000588166 R3HDM1Q15032 1099 aaKnown RBP21.13■□□□□ 0.97
KDM4B-204ENST00000588166 EZH2Q15910 746 aaKnown RBP21.13■□□□□ 0.97
KDM4B-204ENST00000588166 NUTM2GQ5VZR2 741 aa21.13■□□□□ 0.97
KDM4B-204ENST00000588166 CAMKK2Q96RR4 588 aa21.13■□□□□ 0.97
KDM4B-204ENST00000588166 SSH2Q76I76 1423 aa21.12■□□□□ 0.97
KDM4B-204ENST00000588166 PLEKHG3A1L390 1219 aa21.12■□□□□ 0.97
KDM4B-204ENST00000588166 NBPF8Q3BBV2 869 aa21.12■□□□□ 0.97
KDM4B-204ENST00000588166 SIN3AQ96ST3 1273 aa21.12■□□□□ 0.97
KDM4B-204ENST00000588166 STRN4Q9NRL3 753 aa21.12■□□□□ 0.97
KDM4B-204ENST00000588166 RREB1Q92766 1687 aa21.12■□□□□ 0.97
KDM4B-204ENST00000588166 TRIM37O94972 964 aa21.11■□□□□ 0.97
KDM4B-204ENST00000588166 FAM196AQ6ZSG2 479 aa21.11■□□□□ 0.97
KDM4B-204ENST00000588166 BARGINQ6ZT62 677 aa21.11■□□□□ 0.97
KDM4B-204ENST00000588166 CCDC61Q9Y6R9 512 aa21.11■□□□□ 0.97
KDM4B-204ENST00000588166 CPDO75976 1380 aa21.1■□□□□ 0.97
KDM4B-204ENST00000588166 USP19O94966 1318 aa21.1■□□□□ 0.97
KDM4B-204ENST00000588166 NEUROD1Q13562 356 aa21.1■□□□□ 0.97
KDM4B-204ENST00000588166 PARD3Q8TEW0 1356 aa21.08■□□□□ 0.96
KDM4B-204ENST00000588166 NUP188Q5SRE5 1749 aa21.07■□□□□ 0.96
KDM4B-204ENST00000588166 LARP1Q6PKG0 1096 aaKnown RBP21.06■□□□□ 0.96
KDM4B-204ENST00000588166 USP35Q9P2H5 1018 aa21.06■□□□□ 0.96
KDM4B-204ENST00000588166 PARP4Q9UKK3 1724 aaKnown RBP21.05■□□□□ 0.96
KDM4B-204ENST00000588166 NBPF1Q3BBV0 1214 aa21.05■□□□□ 0.96
KDM4B-204ENST00000588166 ABTB2Q8N961 1025 aa21.05■□□□□ 0.96
KDM4B-204ENST00000588166 APBA3O96018 575 aa21.04■□□□□ 0.96
KDM4B-204ENST00000588166 L3MBTL2Q969R5 705 aa21.04■□□□□ 0.96
KDM4B-204ENST00000588166 COL5A2P05997 1499 aaPredicted RBP21.03■□□□□ 0.96
KDM4B-204ENST00000588166 EVA1CP58658 441 aa21.03■□□□□ 0.96
KDM4B-204ENST00000588166 TCP11L2Q8N4U5 519 aa21.03■□□□□ 0.96
KDM4B-204ENST00000588166 PPIP5K1Q6PFW1 1433 aa21.03■□□□□ 0.96
KDM4B-204ENST00000588166 TONSLQ96HA7 1378 aa21.02■□□□□ 0.96
KDM4B-204ENST00000588166 PEAK1Q9H792 1746 aa21.01■□□□□ 0.95
KDM4B-204ENST00000588166 GCP02774 474 aa21.01■□□□□ 0.95
KDM4B-204ENST00000588166 PDE3BQ13370 1112 aa21.01■□□□□ 0.95
KDM4B-204ENST00000588166 CLSPNQ9HAW4 1339 aa21.01■□□□□ 0.95
KDM4B-204ENST00000588166 THRAP3Q9Y2W1 955 aaKnown RBP21■□□□□ 0.95
KDM4B-204ENST00000588166 QRICH2Q9H0J4 1663 aa20.99■□□□□ 0.95
KDM4B-204ENST00000588166 NLRP13Q86W25 1043 aa20.99■□□□□ 0.95
KDM4B-204ENST00000588166 SLIT3O75094 1523 aa20.99■□□□□ 0.95
KDM4B-204ENST00000588166 BRD4O60885 1362 aaPredicted RBP20.98■□□□□ 0.95
KDM4B-204ENST00000588166 TRPM1Q7Z4N2 1603 aa20.98■□□□□ 0.95
KDM4B-204ENST00000588166 CABP2Q9NPB3 220 aa20.98■□□□□ 0.95
KDM4B-204ENST00000588166 CENPJQ9HC77 1338 aaPredicted RBP20.98■□□□□ 0.95
KDM4B-204ENST00000588166 COL18A1P39060 1754 aa20.97■□□□□ 0.95
KDM4B-204ENST00000588166 SBF2Q86WG5 1849 aa20.97■□□□□ 0.95
KDM4B-204ENST00000588166 LRRC37A3O60309 1634 aa20.96■□□□□ 0.95
KDM4B-204ENST00000588166 USP6P35125 1406 aa20.96■□□□□ 0.95
KDM4B-204ENST00000588166 CRB1P82279 1406 aa20.96■□□□□ 0.95
KDM4B-204ENST00000588166 RGPD3A6NKT7 1758 aaPredicted RBP20.96■□□□□ 0.95
KDM4B-204ENST00000588166 RGPD4Q7Z3J3 1758 aa20.96■□□□□ 0.95
KDM4B-204ENST00000588166 SRPK2P78362 688 aaKnown RBP20.96■□□□□ 0.95
KDM4B-204ENST00000588166 PIK3C2AO00443 1686 aa20.96■□□□□ 0.95
KDM4B-204ENST00000588166 AATKQ6ZMQ8 1374 aa20.95■□□□□ 0.94
KDM4B-204ENST00000588166 WNK3Q9BYP7 1800 aa20.94■□□□□ 0.94
KDM4B-204ENST00000588166 CABP1Q9NZU7 370 aa20.92■□□□□ 0.94
KDM4B-204ENST00000588166 OVOS2A0A0G2JMS6 1433 aa20.92■□□□□ 0.94
KDM4B-204ENST00000588166 OVOS2A0A0J9YW53 1432 aa20.92■□□□□ 0.94
KDM4B-204ENST00000588166 OVOS2Q6IE36 1432 aa20.92■□□□□ 0.94
KDM4B-204ENST00000588166 UTRNP46939 3433 aa20.91■□□□□ 0.94
KDM4B-204ENST00000588166 NBPF14Q5TI25 921 aa20.91■□□□□ 0.94
KDM4B-204ENST00000588166 C11orf95C9JLR9 678 aaPredicted RBP20.9■□□□□ 0.94
KDM4B-204ENST00000588166 CCER1Q8TC90 406 aaPredicted RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms