RNA–Protein interactions for RNA: ENST00000588161.5

RBM42-203, Transcript of RNA binding motif protein 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM42, Length 1,609 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-203ENST00000588161 TTC21BQ7Z4L5 1316 aa29.83■■■□□ 2.37
RBM42-203ENST00000588161 SSH2Q76I76 1423 aa29.83■■■□□ 2.37
RBM42-203ENST00000588161 C1orf167Q5SNV9 1468 aa29.82■■■□□ 2.36
RBM42-203ENST00000588161 YTHDC1Q96MU7 727 aaKnown RBP29.82■■■□□ 2.36
RBM42-203ENST00000588161 MST1RQ04912 1400 aa29.8■■■□□ 2.36
RBM42-203ENST00000588161 TTC21AQ8NDW8 1320 aa29.8■■■□□ 2.36
RBM42-203ENST00000588161 NME9Q86XW9 330 aa29.78■■■□□ 2.36
RBM42-203ENST00000588161 PNISRQ8TF01 805 aaKnown RBP29.78■■■□□ 2.36
RBM42-203ENST00000588161 ORAI2Q96SN7 254 aa29.76■■■□□ 2.35
RBM42-203ENST00000588161 TNNT2P45379 298 aaPredicted RBP29.75■■■□□ 2.35
RBM42-203ENST00000588161 FAM9BQ8IZU0 186 aa29.75■■■□□ 2.35
RBM42-203ENST00000588161 SCAF1Q9H7N4 1312 aaKnown RBP29.75■■■□□ 2.35
RBM42-203ENST00000588161 AEBP2Q6ZN18 517 aaPredicted RBP29.74■■■□□ 2.35
RBM42-203ENST00000588161 COG3Q96JB2 828 aa29.74■■■□□ 2.35
RBM42-203ENST00000588161 KIF1AQ12756 1690 aa29.73■■■□□ 2.35
RBM42-203ENST00000588161 PSME1Q06323 249 aa29.71■■■□□ 2.35
RBM42-203ENST00000588161 ZRANB1Q9UGI0 708 aa29.69■■■□□ 2.34
RBM42-203ENST00000588161 MTHFSP49914 203 aa29.68■■■□□ 2.34
RBM42-203ENST00000588161 OVOS2A0A0J9YW53 1432 aa29.68■■■□□ 2.34
RBM42-203ENST00000588161 OVOS2Q6IE36 1432 aa29.68■■■□□ 2.34
RBM42-203ENST00000588161 USP31Q70CQ4 1352 aa29.68■■■□□ 2.34
RBM42-203ENST00000588161 LTBP4Q8N2S1 1624 aa29.67■■■□□ 2.34
RBM42-203ENST00000588161 FOXO3O43524 673 aa29.67■■■□□ 2.34
RBM42-203ENST00000588161 AATKQ6ZMQ8 1374 aa29.66■■■□□ 2.34
RBM42-203ENST00000588161 CFAP53Q96M91 514 aa29.64■■■□□ 2.34
RBM42-203ENST00000588161 PAK3O75914 559 aaPredicted RBP29.63■■■□□ 2.33
RBM42-203ENST00000588161 SLAIN2Q9P270 581 aa29.63■■■□□ 2.33
RBM42-203ENST00000588161 PIK3C2AO00443 1686 aa29.62■■■□□ 2.33
RBM42-203ENST00000588161 INSRP06213 1382 aa29.61■■■□□ 2.33
RBM42-203ENST00000588161 KRT28Q7Z3Y7 464 aa29.6■■■□□ 2.33
RBM42-203ENST00000588161 ABTB2Q8N961 1025 aa29.6■■■□□ 2.33
RBM42-203ENST00000588161 POLKQ9UBT6 870 aa29.6■■■□□ 2.33
RBM42-203ENST00000588161 NLRP6P59044 892 aa29.59■■■□□ 2.33
RBM42-203ENST00000588161 WDR43Q15061 677 aaKnown RBP eCLIP29.59■■■□□ 2.33
RBM42-203ENST00000588161 USP54Q70EL1 1684 aa29.59■■■□□ 2.33
RBM42-203ENST00000588161 NPHP3Q7Z494 1330 aa29.58■■■□□ 2.33
RBM42-203ENST00000588161 CENPBP07199 599 aaPredicted RBP29.57■■■□□ 2.32
RBM42-203ENST00000588161 BRINP3Q76B58 766 aa29.56■■■□□ 2.32
RBM42-203ENST00000588161 SMG6Q86US8 1419 aaKnown RBP29.56■■■□□ 2.32
RBM42-203ENST00000588161 PNPLA6Q8IY17 1366 aa29.56■■■□□ 2.32
RBM42-203ENST00000588161 HNRNPUQ00839 825 aaKnown RBP eCLIP29.56■■■□□ 2.32
RBM42-203ENST00000588161 TRPM3Q9HCF6 1732 aaPredicted RBP29.55■■■□□ 2.32
RBM42-203ENST00000588161 FBLN1P23142 703 aa29.54■■■□□ 2.32
RBM42-203ENST00000588161 XPCQ01831 940 aaPredicted RBP29.54■■■□□ 2.32
RBM42-203ENST00000588161 MAP2P11137 1827 aaKnown RBP29.54■■■□□ 2.32
RBM42-203ENST00000588161 ADAMTS8Q9UP79 889 aa29.53■■■□□ 2.32
RBM42-203ENST00000588161 SBNO1A3KN83 1393 aa29.52■■■□□ 2.32
RBM42-203ENST00000588161 COL3A1P02461 1466 aaPredicted RBP29.5■■■□□ 2.31
RBM42-203ENST00000588161 NUTM2GQ5VZR2 741 aa29.5■■■□□ 2.31
RBM42-203ENST00000588161 EMILIN1Q9Y6C2 1016 aa29.5■■■□□ 2.31
RBM42-203ENST00000588161 MARF1Q9Y4F3 1742 aaKnown RBP29.5■■■□□ 2.31
RBM42-203ENST00000588161 CDK12Q9NYV4 1490 aaPredicted RBP29.5■■■□□ 2.31
RBM42-203ENST00000588161 RRS1Q15050 365 aaKnown RBP29.49■■■□□ 2.31
RBM42-203ENST00000588161 SHPRHQ149N8 1683 aa29.49■■■□□ 2.31
RBM42-203ENST00000588161 BLMP54132 1417 aaPredicted RBP29.49■■■□□ 2.31
RBM42-203ENST00000588161 PPM1GO15355 546 aaPredicted RBP29.48■■■□□ 2.31
RBM42-203ENST00000588161 PXDNQ92626 1479 aa29.48■■■□□ 2.31
RBM42-203ENST00000588161 DDX17Q92841 729 aaKnown RBP29.47■■■□□ 2.31
RBM42-203ENST00000588161 NUDCQ9Y266 331 aa29.47■■■□□ 2.31
RBM42-203ENST00000588161 DIAPH1O60610 1272 aaKnown RBP29.45■■■□□ 2.31
RBM42-203ENST00000588161 ALS2Q96Q42 1657 aa29.44■■■□□ 2.3
RBM42-203ENST00000588161 KCNH5Q8NCM2 988 aa29.44■■■□□ 2.3
RBM42-203ENST00000588161 SOX12O15370 315 aa29.42■■■□□ 2.3
RBM42-203ENST00000588161 LMOD2Q6P5Q4 547 aa29.42■■■□□ 2.3
RBM42-203ENST00000588161 SOS2Q07890 1332 aaPredicted RBP29.42■■■□□ 2.3
RBM42-203ENST00000588161 ZBED9Q6R2W3 1325 aa29.42■■■□□ 2.3
RBM42-203ENST00000588161 TNS3Q68CZ2 1445 aa29.42■■■□□ 2.3
RBM42-203ENST00000588161 USP19O94966 1318 aa29.42■■■□□ 2.3
RBM42-203ENST00000588161 MAP3K19Q56UN5 1328 aa29.42■■■□□ 2.3
RBM42-203ENST00000588161 KIF24Q5T7B8 1368 aa29.41■■■□□ 2.3
RBM42-203ENST00000588161 SPATA31A3Q5VYP0 1347 aa29.41■■■□□ 2.3
RBM42-203ENST00000588161 SLIT3O75094 1523 aa29.4■■■□□ 2.3
RBM42-203ENST00000588161 ARHGEF10O15013 1369 aa29.39■■■□□ 2.29
RBM42-203ENST00000588161 NFAT5O94916 1531 aa29.38■■■□□ 2.29
RBM42-203ENST00000588161 U2AF1L5P0DN76 240 aaPredicted RBP29.38■■■□□ 2.29
RBM42-203ENST00000588161 U2AF1Q01081 240 aaKnown RBP eCLIP29.38■■■□□ 2.29
RBM42-203ENST00000588161 FLT4P35916 1363 aa29.37■■■□□ 2.29
RBM42-203ENST00000588161 NHSL1Q5SYE7 1610 aa29.37■■■□□ 2.29
RBM42-203ENST00000588161 IL13P35225 146 aa29.37■■■□□ 2.29
RBM42-203ENST00000588161 PEAK1Q9H792 1746 aa29.36■■■□□ 2.29
RBM42-203ENST00000588161 U2SURPO15042 1029 aaKnown RBP29.36■■■□□ 2.29
RBM42-203ENST00000588161 GCP02774 474 aa29.35■■■□□ 2.29
RBM42-203ENST00000588161 AMPHP49418 695 aa29.35■■■□□ 2.29
RBM42-203ENST00000588161 RTL1A6NKG5 1358 aa29.33■■■□□ 2.29
RBM42-203ENST00000588161 TOM1O60784 492 aa29.32■■■□□ 2.28
RBM42-203ENST00000588161 HSP90AB2PQ58FF8 381 aa29.32■■■□□ 2.28
RBM42-203ENST00000588161 IQSEC2Q5JU85 1478 aa29.32■■■□□ 2.28
RBM42-203ENST00000588161 CCDC146Q8IYE0 955 aa29.31■■■□□ 2.28
RBM42-203ENST00000588161 RUNDC1Q96C34 613 aa29.31■■■□□ 2.28
RBM42-203ENST00000588161 ROBO1Q9Y6N7 1651 aa29.31■■■□□ 2.28
RBM42-203ENST00000588161 MED1Q15648 1581 aaPredicted RBP29.3■■■□□ 2.28
RBM42-203ENST00000588161 HOXC9P31274 260 aa29.3■■■□□ 2.28
RBM42-203ENST00000588161 EIF4A2Q14240 407 aaKnown RBP29.3■■■□□ 2.28
RBM42-203ENST00000588161 PNNQ9H307 717 aaKnown RBP29.3■■■□□ 2.28
RBM42-203ENST00000588161 FCHSD2O94868 740 aa29.28■■■□□ 2.28
RBM42-203ENST00000588161 ARHGEF25Q86VW2 580 aa29.28■■■□□ 2.28
RBM42-203ENST00000588161 PHRF1Q9P1Y6 1649 aaKnown RBP29.28■■■□□ 2.28
RBM42-203ENST00000588161 NGEFQ8N5V2 710 aa29.27■■■□□ 2.28
RBM42-203ENST00000588161 IP6K1Q92551 441 aa29.27■■■□□ 2.28
RBM42-203ENST00000588161 LTN1O94822 1766 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms