RNA–Protein interactions for RNA: ENST00000587799.1

RANBP3-212, Transcript of RAN binding protein 3, humanhuman

TSL 2

Gene RANBP3, Length 403 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-212ENST00000587799 EDC4Q6P2E9 1401 aaKnown RBP13.67□□□□□ -0.22
RANBP3-212ENST00000587799 HDGFL2Q7Z4V5 671 aaPredicted RBP13.67□□□□□ -0.22
RANBP3-212ENST00000587799 DDX17Q92841 729 aaKnown RBP13.67□□□□□ -0.22
RANBP3-212ENST00000587799 KTN1Q86UP2 1357 aaKnown RBP13.66□□□□□ -0.22
RANBP3-212ENST00000587799 A0A1W2PP64 1363 aa13.65□□□□□ -0.22
RANBP3-212ENST00000587799 MYOM1P52179 1685 aa13.65□□□□□ -0.22
RANBP3-212ENST00000587799 USP54Q70EL1 1684 aa13.63□□□□□ -0.23
RANBP3-212ENST00000587799 XPCQ01831 940 aaPredicted RBP13.63□□□□□ -0.23
RANBP3-212ENST00000587799 TMC1Q8TDI8 760 aa13.63□□□□□ -0.23
RANBP3-212ENST00000587799 SLC12A5Q9H2X9 1139 aa13.63□□□□□ -0.23
RANBP3-212ENST00000587799 USP19O94966 1318 aa13.63□□□□□ -0.23
RANBP3-212ENST00000587799 TTC21BQ7Z4L5 1316 aa13.62□□□□□ -0.23
RANBP3-212ENST00000587799 USP31Q70CQ4 1352 aa13.61□□□□□ -0.23
RANBP3-212ENST00000587799 NLRP13Q86W25 1043 aa13.61□□□□□ -0.23
RANBP3-212ENST00000587799 ABCA3Q99758 1704 aa13.61□□□□□ -0.23
RANBP3-212ENST00000587799 CRYBG1Q9Y4K1 1723 aa13.61□□□□□ -0.23
RANBP3-212ENST00000587799 LRP6O75581 1613 aa13.61□□□□□ -0.23
RANBP3-212ENST00000587799 PAK3O75914 559 aaPredicted RBP13.6□□□□□ -0.23
RANBP3-212ENST00000587799 KIF7Q2M1P5 1343 aa13.6□□□□□ -0.23
RANBP3-212ENST00000587799 PIK3C2AO00443 1686 aa13.59□□□□□ -0.23
RANBP3-212ENST00000587799 SLIT3O75094 1523 aa13.59□□□□□ -0.23
RANBP3-212ENST00000587799 ABTB2Q8N961 1025 aa13.59□□□□□ -0.23
RANBP3-212ENST00000587799 CCDC7Q96M83 1385 aa13.58□□□□□ -0.23
RANBP3-212ENST00000587799 ABCC6O95255 1503 aa13.58□□□□□ -0.24
RANBP3-212ENST00000587799 CPDO75976 1380 aa13.58□□□□□ -0.24
RANBP3-212ENST00000587799 PHRF1Q9P1Y6 1649 aaKnown RBP13.57□□□□□ -0.24
RANBP3-212ENST00000587799 OVOS2A0A0J9YW53 1432 aa13.57□□□□□ -0.24
RANBP3-212ENST00000587799 OVOS2Q6IE36 1432 aa13.57□□□□□ -0.24
RANBP3-212ENST00000587799 KCNH5Q8NCM2 988 aa13.57□□□□□ -0.24
RANBP3-212ENST00000587799 NSD2O96028 1365 aa13.57□□□□□ -0.24
RANBP3-212ENST00000587799 MARF1Q9Y4F3 1742 aaKnown RBP13.56□□□□□ -0.24
RANBP3-212ENST00000587799 LMOD2Q6P5Q4 547 aa13.56□□□□□ -0.24
RANBP3-212ENST00000587799 C11orf95C9JLR9 678 aaPredicted RBP13.55□□□□□ -0.24
RANBP3-212ENST00000587799 HAP1P54257 671 aaPredicted RBP13.55□□□□□ -0.24
RANBP3-212ENST00000587799 NLRP6P59044 892 aa13.55□□□□□ -0.24
RANBP3-212ENST00000587799 CGNL1Q0VF96 1302 aa13.55□□□□□ -0.24
RANBP3-212ENST00000587799 WASHC2AQ641Q2 1341 aa13.55□□□□□ -0.24
RANBP3-212ENST00000587799 NSD3Q9BZ95 1437 aa13.55□□□□□ -0.24
RANBP3-212ENST00000587799 MEX3CQ5U5Q3 659 aaKnown RBP13.54□□□□□ -0.24
RANBP3-212ENST00000587799 FNBP4Q8N3X1 1017 aaPredicted RBP13.54□□□□□ -0.24
RANBP3-212ENST00000587799 SLIT2O94813 1529 aa13.54□□□□□ -0.24
RANBP3-212ENST00000587799 NWD2Q9ULI1 1742 aa13.53□□□□□ -0.24
RANBP3-212ENST00000587799 GCP02774 474 aa13.53□□□□□ -0.24
RANBP3-212ENST00000587799 ZNF772Q68DY9 489 aaPredicted RBP13.53□□□□□ -0.24
RANBP3-212ENST00000587799 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.53□□□□□ -0.24
RANBP3-212ENST00000587799 COL14A1Q05707 1796 aaKnown RBP13.53□□□□□ -0.24
RANBP3-212ENST00000587799 NUTM2BA6NNL0 878 aaPredicted RBP13.52□□□□□ -0.25
RANBP3-212ENST00000587799 NUTM2EB1AL46 878 aaPredicted RBP13.52□□□□□ -0.25
RANBP3-212ENST00000587799 NUTM2AQ8IVF1 878 aaPredicted RBP13.52□□□□□ -0.25
RANBP3-212ENST00000587799 NPC1L1Q9UHC9 1359 aa13.52□□□□□ -0.25
RANBP3-212ENST00000587799 NFAT5O94916 1531 aa13.52□□□□□ -0.25
RANBP3-212ENST00000587799 KIF20BQ96Q89 1820 aa13.51□□□□□ -0.25
RANBP3-212ENST00000587799 KIF24Q5T7B8 1368 aa13.51□□□□□ -0.25
RANBP3-212ENST00000587799 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.51□□□□□ -0.25
RANBP3-212ENST00000587799 COG3Q96JB2 828 aa13.51□□□□□ -0.25
RANBP3-212ENST00000587799 PHF23Q9BUL5 403 aaPredicted RBP13.51□□□□□ -0.25
RANBP3-212ENST00000587799 CARD14Q9BXL6 1004 aa13.51□□□□□ -0.25
RANBP3-212ENST00000587799 AATKQ6ZMQ8 1374 aa13.5□□□□□ -0.25
RANBP3-212ENST00000587799 FYB1O15117 783 aa13.5□□□□□ -0.25
RANBP3-212ENST00000587799 NME9Q86XW9 330 aa13.5□□□□□ -0.25
RANBP3-212ENST00000587799 CABLES1Q8TDN4 633 aa13.5□□□□□ -0.25
RANBP3-212ENST00000587799 POLR3GLQ9BT43 218 aa13.5□□□□□ -0.25
RANBP3-212ENST00000587799 PANK3Q9H999 370 aa13.5□□□□□ -0.25
RANBP3-212ENST00000587799 KIAA0232Q92628 1395 aa13.49□□□□□ -0.25
RANBP3-212ENST00000587799 ADAMTS2O95450 1211 aa13.49□□□□□ -0.25
RANBP3-212ENST00000587799 NGLY1Q96IV0 654 aa13.49□□□□□ -0.25
RANBP3-212ENST00000587799 PRDM11Q9NQV5 511 aa13.49□□□□□ -0.25
RANBP3-212ENST00000587799 KNSTRNQ9Y448 316 aa13.49□□□□□ -0.25
RANBP3-212ENST00000587799 RTL1A6NKG5 1358 aa13.48□□□□□ -0.25
RANBP3-212ENST00000587799 ANKRD26Q9UPS8 1709 aa13.48□□□□□ -0.25
RANBP3-212ENST00000587799 AFF2P51816 1311 aa13.48□□□□□ -0.25
RANBP3-212ENST00000587799 PLCH1Q4KWH8 1693 aa13.48□□□□□ -0.25
RANBP3-212ENST00000587799 LMO7Q8WWI1 1683 aa13.48□□□□□ -0.25
RANBP3-212ENST00000587799 C8orf37Q96NL8 207 aa13.48□□□□□ -0.25
RANBP3-212ENST00000587799 BCL9LQ86UU0 1499 aa13.48□□□□□ -0.25
RANBP3-212ENST00000587799 NUTM2GQ5VZR2 741 aa13.47□□□□□ -0.25
RANBP3-212ENST00000587799 ARHGEF25Q86VW2 580 aa13.47□□□□□ -0.25
RANBP3-212ENST00000587799 BLMP54132 1417 aaPredicted RBP13.47□□□□□ -0.25
RANBP3-212ENST00000587799 PER1O15534 1290 aaPredicted RBP13.46□□□□□ -0.25
RANBP3-212ENST00000587799 UNC5CLQ8IV45 518 aa13.46□□□□□ -0.25
RANBP3-212ENST00000587799 CDK12Q9NYV4 1490 aaPredicted RBP13.46□□□□□ -0.25
RANBP3-212ENST00000587799 ATRNO75882 1429 aa13.46□□□□□ -0.26
RANBP3-212ENST00000587799 NRAPQ86VF7 1730 aa13.45□□□□□ -0.26
RANBP3-212ENST00000587799 FAM83GA6ND36 823 aa13.45□□□□□ -0.26
RANBP3-212ENST00000587799 USP21Q9UK80 565 aa13.45□□□□□ -0.26
RANBP3-212ENST00000587799 TRPC5Q9UL62 973 aaPredicted RBP13.45□□□□□ -0.26
RANBP3-212ENST00000587799 AMER1Q5JTC6 1135 aaPredicted RBP13.44□□□□□ -0.26
RANBP3-212ENST00000587799 GGNBP2Q9H3C7 697 aa13.44□□□□□ -0.26
RANBP3-212ENST00000587799 RGS17Q9UGC6 210 aaPredicted RBP13.44□□□□□ -0.26
RANBP3-212ENST00000587799 ZC3H6P61129 1189 aaKnown RBP13.43□□□□□ -0.26
RANBP3-212ENST00000587799 VPS72Q15906 364 aa13.43□□□□□ -0.26
RANBP3-212ENST00000587799 SMG6Q86US8 1419 aaKnown RBP13.43□□□□□ -0.26
RANBP3-212ENST00000587799 COL18A1P39060 1754 aa13.43□□□□□ -0.26
RANBP3-212ENST00000587799 COL5A2P05997 1499 aaPredicted RBP13.42□□□□□ -0.26
RANBP3-212ENST00000587799 BTG4Q9NY30 223 aa13.42□□□□□ -0.26
RANBP3-212ENST00000587799 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
RANBP3-212ENST00000587799 CAMTA1Q9Y6Y1 1673 aa13.42□□□□□ -0.26
RANBP3-212ENST00000587799 LTN1O94822 1766 aa13.41□□□□□ -0.26
RANBP3-212ENST00000587799 RBM6P78332 1123 aaKnown RBP13.41□□□□□ -0.26
RANBP3-212ENST00000587799 FLT4P35916 1363 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms