RNA–Protein interactions for RNA: ENST00000587623.1

CTDP1-204, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 435 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-204ENST00000587623 CABLES1Q8TDN4 633 aa12.19□□□□□ -0.46
CTDP1-204ENST00000587623 QTRT2Q9H974 415 aaKnown RBP12.19□□□□□ -0.46
CTDP1-204ENST00000587623 COL22A1Q8NFW1 1626 aaPredicted RBP12.19□□□□□ -0.46
CTDP1-204ENST00000587623 BRD4O60885 1362 aaPredicted RBP12.18□□□□□ -0.46
CTDP1-204ENST00000587623 SOCS7O14512 581 aa12.18□□□□□ -0.46
CTDP1-204ENST00000587623 TMF1P82094 1093 aa12.18□□□□□ -0.46
CTDP1-204ENST00000587623 CDCA8Q53HL2 280 aa12.18□□□□□ -0.46
CTDP1-204ENST00000587623 HDGFL2Q7Z4V5 671 aaPredicted RBP12.18□□□□□ -0.46
CTDP1-204ENST00000587623 TRPC5Q9UL62 973 aaPredicted RBP12.18□□□□□ -0.46
CTDP1-204ENST00000587623 USP47Q96K76 1375 aa12.18□□□□□ -0.46
CTDP1-204ENST00000587623 NLRP13Q86W25 1043 aa12.17□□□□□ -0.46
CTDP1-204ENST00000587623 RBM6P78332 1123 aaKnown RBP12.16□□□□□ -0.46
CTDP1-204ENST00000587623 NUTM2GQ5VZR2 741 aa12.16□□□□□ -0.46
CTDP1-204ENST00000587623 FNBP4Q8N3X1 1017 aaPredicted RBP12.16□□□□□ -0.46
CTDP1-204ENST00000587623 PUS7Q96PZ0 661 aaKnown RBP12.16□□□□□ -0.46
CTDP1-204ENST00000587623 TERF2IPQ9NYB0 399 aa12.16□□□□□ -0.46
CTDP1-204ENST00000587623 PRDM11Q9NQV5 511 aa12.15□□□□□ -0.46
CTDP1-204ENST00000587623 CCDC9Q9Y3X0 531 aaKnown RBP12.15□□□□□ -0.46
CTDP1-204ENST00000587623 TOPAZ1Q8N9V7 1692 aa12.15□□□□□ -0.46
CTDP1-204ENST00000587623 NLRP6P59044 892 aa12.14□□□□□ -0.47
CTDP1-204ENST00000587623 UNC5CLQ8IV45 518 aa12.14□□□□□ -0.47
CTDP1-204ENST00000587623 KTN1Q86UP2 1357 aaKnown RBP12.14□□□□□ -0.47
CTDP1-204ENST00000587623 USP6P35125 1406 aa12.13□□□□□ -0.47
CTDP1-204ENST00000587623 EIF4G2P78344 907 aaKnown RBP eCLIP12.13□□□□□ -0.47
CTDP1-204ENST00000587623 TRPM3Q9HCF6 1732 aaPredicted RBP12.13□□□□□ -0.47
CTDP1-204ENST00000587623 NINLQ9Y2I6 1382 aa12.13□□□□□ -0.47
CTDP1-204ENST00000587623 TTC21AQ8NDW8 1320 aa12.12□□□□□ -0.47
CTDP1-204ENST00000587623 TESK2Q96S53 571 aa12.12□□□□□ -0.47
CTDP1-204ENST00000587623 TTC21BQ7Z4L5 1316 aa12.11□□□□□ -0.47
CTDP1-204ENST00000587623 ALS2Q96Q42 1657 aa12.11□□□□□ -0.47
CTDP1-204ENST00000587623 ZBTB7CA1YPR0 619 aa12.11□□□□□ -0.47
CTDP1-204ENST00000587623 FAM83GA6ND36 823 aa12.11□□□□□ -0.47
CTDP1-204ENST00000587623 ZC3H6P61129 1189 aaKnown RBP12.11□□□□□ -0.47
CTDP1-204ENST00000587623 POLR3GLQ9BT43 218 aa12.11□□□□□ -0.47
CTDP1-204ENST00000587623 SLC12A5Q9H2X9 1139 aa12.11□□□□□ -0.47
CTDP1-204ENST00000587623 MARF1Q9Y4F3 1742 aaKnown RBP12.11□□□□□ -0.47
CTDP1-204ENST00000587623 EVA1CP58658 441 aa12.1□□□□□ -0.47
CTDP1-204ENST00000587623 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.1□□□□□ -0.47
CTDP1-204ENST00000587623 BTG4Q9NY30 223 aa12.1□□□□□ -0.47
CTDP1-204ENST00000587623 A0A0G2JS52 829 aa12.09□□□□□ -0.47
CTDP1-204ENST00000587623 GCP02774 474 aa12.09□□□□□ -0.47
CTDP1-204ENST00000587623 MYT1Q01538 1121 aa12.09□□□□□ -0.47
CTDP1-204ENST00000587623 KCNH5Q8NCM2 988 aa12.09□□□□□ -0.47
CTDP1-204ENST00000587623 GJD4Q96KN9 370 aaPredicted RBP12.09□□□□□ -0.47
CTDP1-204ENST00000587623 KIAA0232Q92628 1395 aa12.08□□□□□ -0.48
CTDP1-204ENST00000587623 CHRNA2Q15822 529 aa12.08□□□□□ -0.48
CTDP1-204ENST00000587623 VPS72Q15906 364 aa12.08□□□□□ -0.48
CTDP1-204ENST00000587623 ATRNO75882 1429 aa12.08□□□□□ -0.48
CTDP1-204ENST00000587623 BCL9LQ86UU0 1499 aa12.08□□□□□ -0.48
CTDP1-204ENST00000587623 CDK12Q9NYV4 1490 aaPredicted RBP12.08□□□□□ -0.48
CTDP1-204ENST00000587623 SLIT2O94813 1529 aa12.07□□□□□ -0.48
CTDP1-204ENST00000587623 SOX12O15370 315 aa12.07□□□□□ -0.48
CTDP1-204ENST00000587623 CPSF1Q10570 1443 aaKnown RBP12.07□□□□□ -0.48
CTDP1-204ENST00000587623 STRN4Q9NRL3 753 aa12.07□□□□□ -0.48
CTDP1-204ENST00000587623 USP19O94966 1318 aa12.07□□□□□ -0.48
CTDP1-204ENST00000587623 EDC4Q6P2E9 1401 aaKnown RBP12.06□□□□□ -0.48
CTDP1-204ENST00000587623 COL14A1Q05707 1796 aaKnown RBP12.06□□□□□ -0.48
CTDP1-204ENST00000587623 HSPA5P11021 654 aaKnown RBP12.06□□□□□ -0.48
CTDP1-204ENST00000587623 ABCA3Q99758 1704 aa12.06□□□□□ -0.48
CTDP1-204ENST00000587623 AKAP12Q02952 1782 aa12.05□□□□□ -0.48
CTDP1-204ENST00000587623 A0A1W2PP64 1363 aa12.05□□□□□ -0.48
CTDP1-204ENST00000587623 CPDO75976 1380 aa12.05□□□□□ -0.48
CTDP1-204ENST00000587623 SSH2Q76I76 1423 aa12.04□□□□□ -0.48
CTDP1-204ENST00000587623 NWD2Q9ULI1 1742 aa12.04□□□□□ -0.48
CTDP1-204ENST00000587623 COG3Q96JB2 828 aa12.04□□□□□ -0.48
CTDP1-204ENST00000587623 ANKRD36BQ8N2N9 1353 aa12.04□□□□□ -0.48
CTDP1-204ENST00000587623 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.03□□□□□ -0.48
CTDP1-204ENST00000587623 NME9Q86XW9 330 aa12.03□□□□□ -0.48
CTDP1-204ENST00000587623 PHRF1Q9P1Y6 1649 aaKnown RBP12.03□□□□□ -0.48
CTDP1-204ENST00000587623 PLCH1Q4KWH8 1693 aa12.03□□□□□ -0.48
CTDP1-204ENST00000587623 CSB-PGBD3P0DP91 1061 aa12.02□□□□□ -0.49
CTDP1-204ENST00000587623 RGS12O14924 1447 aa12.02□□□□□ -0.49
CTDP1-204ENST00000587623 MON2Q7Z3U7 1717 aa12.01□□□□□ -0.49
CTDP1-204ENST00000587623 FAM98CQ17RN3 349 aaKnown RBP12.01□□□□□ -0.49
CTDP1-204ENST00000587623 SEPT12Q8IYM1 358 aa12.01□□□□□ -0.49
CTDP1-204ENST00000587623 USP35Q9P2H5 1018 aa12.01□□□□□ -0.49
CTDP1-204ENST00000587623 USP31Q70CQ4 1352 aa12.01□□□□□ -0.49
CTDP1-204ENST00000587623 NRKQ7Z2Y5 1582 aa12.01□□□□□ -0.49
CTDP1-204ENST00000587623 PIK3C2AO00443 1686 aa12□□□□□ -0.49
CTDP1-204ENST00000587623 ZRANB1Q9UGI0 708 aa12□□□□□ -0.49
CTDP1-204ENST00000587623 SPATA31A5Q5VU36 1347 aa12□□□□□ -0.49
CTDP1-204ENST00000587623 SPATA31A7Q8IWB4 1347 aa12□□□□□ -0.49
CTDP1-204ENST00000587623 AATKQ6ZMQ8 1374 aa12□□□□□ -0.49
CTDP1-204ENST00000587623 CD163L1Q9NR16 1453 aa12□□□□□ -0.49
CTDP1-204ENST00000587623 SLIT3O75094 1523 aa12□□□□□ -0.49
CTDP1-204ENST00000587623 CRYBG1Q9Y4K1 1723 aa12□□□□□ -0.49
CTDP1-204ENST00000587623 TOM1L2Q6ZVM7 507 aa11.99□□□□□ -0.49
CTDP1-204ENST00000587623 ARHGEF25Q86VW2 580 aa11.99□□□□□ -0.49
CTDP1-204ENST00000587623 LARP1Q6PKG0 1096 aaKnown RBP11.98□□□□□ -0.49
CTDP1-204ENST00000587623 KRT27Q7Z3Y8 459 aa11.98□□□□□ -0.49
CTDP1-204ENST00000587623 TCP11L2Q8N4U5 519 aa11.98□□□□□ -0.49
CTDP1-204ENST00000587623 CGNL1Q0VF96 1302 aa11.97□□□□□ -0.49
CTDP1-204ENST00000587623 SPATA31A1Q5TZJ5 1347 aa11.97□□□□□ -0.49
CTDP1-204ENST00000587623 AMPHP49418 695 aa11.97□□□□□ -0.49
CTDP1-204ENST00000587623 SF3B2Q13435 895 aaKnown RBP11.97□□□□□ -0.49
CTDP1-204ENST00000587623 THRAP3Q9Y2W1 955 aaKnown RBP11.97□□□□□ -0.49
CTDP1-204ENST00000587623 ONECUT3O60422 494 aaPredicted RBP11.96□□□□□ -0.49
CTDP1-204ENST00000587623 PDE3BQ13370 1112 aa11.96□□□□□ -0.49
CTDP1-204ENST00000587623 UPF1Q92900 1129 aaKnown RBP eCLIP11.96□□□□□ -0.49
CTDP1-204ENST00000587623 GGNBP2Q9H3C7 697 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms