RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 NHSL1Q5SYE7 1610 aa14.09□□□□□ -0.15
CLPTM1-207ENST00000587537 AMER1Q5JTC6 1135 aaPredicted RBP14.09□□□□□ -0.15
CLPTM1-207ENST00000587537 BRINP3Q76B58 766 aa14.09□□□□□ -0.15
CLPTM1-207ENST00000587537 PMFBP1Q8TBY8 1022 aa14.09□□□□□ -0.15
CLPTM1-207ENST00000587537 CARD14Q9BXL6 1004 aa14.09□□□□□ -0.15
CLPTM1-207ENST00000587537 USP54Q70EL1 1684 aa14.09□□□□□ -0.15
CLPTM1-207ENST00000587537 ORAI2Q96SN7 254 aa14.08□□□□□ -0.16
CLPTM1-207ENST00000587537 TTC21BQ7Z4L5 1316 aa14.08□□□□□ -0.16
CLPTM1-207ENST00000587537 AHDC1Q5TGY3 1603 aaPredicted RBP14.08□□□□□ -0.16
CLPTM1-207ENST00000587537 ROBO1Q9Y6N7 1651 aa14.07□□□□□ -0.16
CLPTM1-207ENST00000587537 SCAF1Q9H7N4 1312 aaKnown RBP14.07□□□□□ -0.16
CLPTM1-207ENST00000587537 USP31Q70CQ4 1352 aa14.07□□□□□ -0.16
CLPTM1-207ENST00000587537 TRPM3Q9HCF6 1732 aaPredicted RBP14.07□□□□□ -0.16
CLPTM1-207ENST00000587537 ARHGEF10O15013 1369 aa14.06□□□□□ -0.16
CLPTM1-207ENST00000587537 PARD3Q8TEW0 1356 aa14.06□□□□□ -0.16
CLPTM1-207ENST00000587537 PXDNQ92626 1479 aa14.06□□□□□ -0.16
CLPTM1-207ENST00000587537 FOXO3O43524 673 aa14.05□□□□□ -0.16
CLPTM1-207ENST00000587537 KRT28Q7Z3Y7 464 aa14.05□□□□□ -0.16
CLPTM1-207ENST00000587537 PRKRIP1Q9H875 184 aaPredicted RBP14.05□□□□□ -0.16
CLPTM1-207ENST00000587537 SOS2Q07890 1332 aaPredicted RBP14.05□□□□□ -0.16
CLPTM1-207ENST00000587537 UBAP1LF5GYI3 381 aa14.04□□□□□ -0.16
CLPTM1-207ENST00000587537 FYB1O15117 783 aa14.04□□□□□ -0.16
CLPTM1-207ENST00000587537 COG3Q96JB2 828 aa14.04□□□□□ -0.16
CLPTM1-207ENST00000587537 TNS3Q68CZ2 1445 aa14.04□□□□□ -0.16
CLPTM1-207ENST00000587537 ALS2Q96Q42 1657 aa14.03□□□□□ -0.16
CLPTM1-207ENST00000587537 PIK3C2AO00443 1686 aa14.02□□□□□ -0.16
CLPTM1-207ENST00000587537 OVOS2A0A0J9YW53 1432 aa14.02□□□□□ -0.16
CLPTM1-207ENST00000587537 OVOS2Q6IE36 1432 aa14.02□□□□□ -0.16
CLPTM1-207ENST00000587537 MORC1Q86VD1 984 aa14.02□□□□□ -0.17
CLPTM1-207ENST00000587537 NLRP13Q86W25 1043 aa14.02□□□□□ -0.17
CLPTM1-207ENST00000587537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.02□□□□□ -0.17
CLPTM1-207ENST00000587537 MED1Q15648 1581 aaPredicted RBP14.01□□□□□ -0.17
CLPTM1-207ENST00000587537 AATKQ6ZMQ8 1374 aa14.01□□□□□ -0.17
CLPTM1-207ENST00000587537 MYBBP1AQ9BQG0 1328 aaKnown RBP14.01□□□□□ -0.17
CLPTM1-207ENST00000587537 PAK3O75914 559 aaPredicted RBP14.01□□□□□ -0.17
CLPTM1-207ENST00000587537 ABTB2Q8N961 1025 aa14.01□□□□□ -0.17
CLPTM1-207ENST00000587537 SPATA31A3Q5VYP0 1347 aa14□□□□□ -0.17
CLPTM1-207ENST00000587537 CCER2I3L3R5 266 aa14□□□□□ -0.17
CLPTM1-207ENST00000587537 CC2D1BQ5T0F9 858 aaKnown RBP14□□□□□ -0.17
CLPTM1-207ENST00000587537 KCNH5Q8NCM2 988 aa14□□□□□ -0.17
CLPTM1-207ENST00000587537 LRRC59Q96AG4 307 aaKnown RBP14□□□□□ -0.17
CLPTM1-207ENST00000587537 KIF24Q5T7B8 1368 aa13.99□□□□□ -0.17
CLPTM1-207ENST00000587537 PHLPP1O60346 1717 aa13.98□□□□□ -0.17
CLPTM1-207ENST00000587537 NLRP6P59044 892 aa13.98□□□□□ -0.17
CLPTM1-207ENST00000587537 NME9Q86XW9 330 aa13.98□□□□□ -0.17
CLPTM1-207ENST00000587537 GGNBP2Q9H3C7 697 aa13.98□□□□□ -0.17
CLPTM1-207ENST00000587537 USP19O94966 1318 aa13.97□□□□□ -0.17
CLPTM1-207ENST00000587537 SLIT3O75094 1523 aa13.97□□□□□ -0.17
CLPTM1-207ENST00000587537 COL16A1Q07092 1604 aaPredicted RBP13.96□□□□□ -0.17
CLPTM1-207ENST00000587537 COL22A1Q8NFW1 1626 aaPredicted RBP13.96□□□□□ -0.17
CLPTM1-207ENST00000587537 MARF1Q9Y4F3 1742 aaKnown RBP13.95□□□□□ -0.18
CLPTM1-207ENST00000587537 ABCC6O95255 1503 aa13.95□□□□□ -0.18
CLPTM1-207ENST00000587537 PHRF1Q9P1Y6 1649 aaKnown RBP13.95□□□□□ -0.18
CLPTM1-207ENST00000587537 SMG6Q86US8 1419 aaKnown RBP13.95□□□□□ -0.18
CLPTM1-207ENST00000587537 PPP2R1AP30153 589 aa13.94□□□□□ -0.18
CLPTM1-207ENST00000587537 PIP4K2BP78356 416 aa13.94□□□□□ -0.18
CLPTM1-207ENST00000587537 CFAP53Q96M91 514 aa13.94□□□□□ -0.18
CLPTM1-207ENST00000587537 RTL1A6NKG5 1358 aa13.94□□□□□ -0.18
CLPTM1-207ENST00000587537 MAP2P11137 1827 aaKnown RBP13.93□□□□□ -0.18
CLPTM1-207ENST00000587537 XPCQ01831 940 aaPredicted RBP13.93□□□□□ -0.18
CLPTM1-207ENST00000587537 LMOD2Q6P5Q4 547 aa13.93□□□□□ -0.18
CLPTM1-207ENST00000587537 INSRP06213 1382 aa13.93□□□□□ -0.18
CLPTM1-207ENST00000587537 CDK12Q9NYV4 1490 aaPredicted RBP13.93□□□□□ -0.18
CLPTM1-207ENST00000587537 CRYBG1Q9Y4K1 1723 aa13.93□□□□□ -0.18
CLPTM1-207ENST00000587537 SHPRHQ149N8 1683 aa13.92□□□□□ -0.18
CLPTM1-207ENST00000587537 NFAT5O94916 1531 aa13.92□□□□□ -0.18
CLPTM1-207ENST00000587537 MIER1Q8N108 512 aa13.91□□□□□ -0.18
CLPTM1-207ENST00000587537 DDX17Q92841 729 aaKnown RBP13.91□□□□□ -0.18
CLPTM1-207ENST00000587537 CPDO75976 1380 aa13.91□□□□□ -0.18
CLPTM1-207ENST00000587537 GCP02774 474 aa13.9□□□□□ -0.18
CLPTM1-207ENST00000587537 FLT4P35916 1363 aa13.9□□□□□ -0.18
CLPTM1-207ENST00000587537 PNPLA6Q8IY17 1366 aa13.9□□□□□ -0.18
CLPTM1-207ENST00000587537 JCADQ9P266 1359 aa13.9□□□□□ -0.18
CLPTM1-207ENST00000587537 ABCA3Q99758 1704 aa13.9□□□□□ -0.18
CLPTM1-207ENST00000587537 LTN1O94822 1766 aa13.88□□□□□ -0.19
CLPTM1-207ENST00000587537 MTHFSP49914 203 aa13.88□□□□□ -0.19
CLPTM1-207ENST00000587537 MRS2Q9HD23 443 aa13.88□□□□□ -0.19
CLPTM1-207ENST00000587537 POLKQ9UBT6 870 aa13.88□□□□□ -0.19
CLPTM1-207ENST00000587537 ZRANB1Q9UGI0 708 aa13.88□□□□□ -0.19
CLPTM1-207ENST00000587537 BLMP54132 1417 aaPredicted RBP13.88□□□□□ -0.19
CLPTM1-207ENST00000587537 SPATA31A6Q5VVP1 1343 aa13.88□□□□□ -0.19
CLPTM1-207ENST00000587537 TNNT2P45379 298 aaPredicted RBP13.87□□□□□ -0.19
CLPTM1-207ENST00000587537 HAP1P54257 671 aaPredicted RBP13.87□□□□□ -0.19
CLPTM1-207ENST00000587537 CNGB1Q14028 1251 aaPredicted RBP13.87□□□□□ -0.19
CLPTM1-207ENST00000587537 NUTM2GQ5VZR2 741 aa13.87□□□□□ -0.19
CLPTM1-207ENST00000587537 NUDCQ9Y266 331 aa13.87□□□□□ -0.19
CLPTM1-207ENST00000587537 AMPHP49418 695 aa13.86□□□□□ -0.19
CLPTM1-207ENST00000587537 ARHGEF25Q86VW2 580 aa13.86□□□□□ -0.19
CLPTM1-207ENST00000587537 MAP3K19Q56UN5 1328 aa13.86□□□□□ -0.19
CLPTM1-207ENST00000587537 FBXO41Q8TF61 875 aa13.85□□□□□ -0.19
CLPTM1-207ENST00000587537 IP6K1Q92551 441 aa13.85□□□□□ -0.19
CLPTM1-207ENST00000587537 FAM208AQ9UK61 1670 aaKnown RBP13.84□□□□□ -0.19
CLPTM1-207ENST00000587537 COL3A1P02461 1466 aaPredicted RBP13.83□□□□□ -0.2
CLPTM1-207ENST00000587537 DIAPH1O60610 1272 aaKnown RBP13.83□□□□□ -0.2
CLPTM1-207ENST00000587537 RRS1Q15050 365 aaKnown RBP13.83□□□□□ -0.2
CLPTM1-207ENST00000587537 PNNQ9H307 717 aaKnown RBP13.83□□□□□ -0.2
CLPTM1-207ENST00000587537 EMILIN1Q9Y6C2 1016 aa13.83□□□□□ -0.2
CLPTM1-207ENST00000587537 COL14A1Q05707 1796 aaKnown RBP13.83□□□□□ -0.2
CLPTM1-207ENST00000587537 HOXC9P31274 260 aa13.82□□□□□ -0.2
CLPTM1-207ENST00000587537 WDR43Q15061 677 aaKnown RBP eCLIP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms