RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.28■■■□□ 2.92
LSM7-204ENST00000587502 GJD4Q96KN9 370 aaPredicted RBP33.27■■■□□ 2.92
LSM7-204ENST00000587502 ABCA3Q99758 1704 aa33.27■■■□□ 2.92
LSM7-204ENST00000587502 EVC2Q86UK5 1308 aa33.27■■■□□ 2.92
LSM7-204ENST00000587502 CABP2Q9NPB3 220 aa33.26■■■□□ 2.91
LSM7-204ENST00000587502 UPF1Q92900 1129 aaKnown RBP eCLIP33.25■■■□□ 2.91
LSM7-204ENST00000587502 PCGF6Q9BYE7 350 aa33.24■■■□□ 2.91
LSM7-204ENST00000587502 PPIP5K1Q6PFW1 1433 aa33.23■■■□□ 2.91
LSM7-204ENST00000587502 FAM83GA6ND36 823 aa33.21■■■□□ 2.91
LSM7-204ENST00000587502 NWD2Q9ULI1 1742 aa33.21■■■□□ 2.91
LSM7-204ENST00000587502 CARD11Q9BXL7 1154 aa33.19■■■□□ 2.9
LSM7-204ENST00000587502 BRD4O60885 1362 aaPredicted RBP33.19■■■□□ 2.9
LSM7-204ENST00000587502 VPS72Q15906 364 aa33.18■■■□□ 2.9
LSM7-204ENST00000587502 RALGAPBQ86X10 1494 aa33.16■■■□□ 2.9
LSM7-204ENST00000587502 PLCH1Q4KWH8 1693 aa33.16■■■□□ 2.9
LSM7-204ENST00000587502 ATAD2Q6PL18 1390 aa33.15■■■□□ 2.9
LSM7-204ENST00000587502 CABP1Q9NZU7 370 aa33.15■■■□□ 2.9
LSM7-204ENST00000587502 ABTB2Q8N961 1025 aa33.14■■■□□ 2.9
LSM7-204ENST00000587502 COL14A1Q05707 1796 aaKnown RBP33.12■■■□□ 2.89
LSM7-204ENST00000587502 BTG4Q9NY30 223 aa33.12■■■□□ 2.89
LSM7-204ENST00000587502 CCDC9Q9Y3X0 531 aaKnown RBP33.12■■■□□ 2.89
LSM7-204ENST00000587502 CRYBG1Q9Y4K1 1723 aa33.11■■■□□ 2.89
LSM7-204ENST00000587502 SBNO2Q9Y2G9 1366 aa33.11■■■□□ 2.89
LSM7-204ENST00000587502 PRDM11Q9NQV5 511 aa33.11■■■□□ 2.89
LSM7-204ENST00000587502 GLI3P10071 1580 aa33.09■■■□□ 2.89
LSM7-204ENST00000587502 NUTM2GQ5VZR2 741 aa33.09■■■□□ 2.89
LSM7-204ENST00000587502 NLRP13Q86W25 1043 aa33.08■■■□□ 2.89
LSM7-204ENST00000587502 ZNF692Q9BU19 519 aaPredicted RBP33.07■■■□□ 2.88
LSM7-204ENST00000587502 USP6P35125 1406 aa33.06■■■□□ 2.88
LSM7-204ENST00000587502 KIAA0232Q92628 1395 aa33.05■■■□□ 2.88
LSM7-204ENST00000587502 PHRF1Q9P1Y6 1649 aaKnown RBP33.04■■■□□ 2.88
LSM7-204ENST00000587502 ONECUT3O60422 494 aaPredicted RBP33.04■■■□□ 2.88
LSM7-204ENST00000587502 USP19O94966 1318 aa33.02■■■□□ 2.88
LSM7-204ENST00000587502 NRAPQ86VF7 1730 aa33.02■■■□□ 2.88
LSM7-204ENST00000587502 ZC3H6P61129 1189 aaKnown RBP33.01■■■□□ 2.87
LSM7-204ENST00000587502 SEPT12Q8IYM1 358 aa33.01■■■□□ 2.87
LSM7-204ENST00000587502 CLSPNQ9HAW4 1339 aa33■■■□□ 2.87
LSM7-204ENST00000587502 SLC24A1O60721 1099 aa32.99■■■□□ 2.87
LSM7-204ENST00000587502 CCDC125Q86Z20 511 aa32.98■■■□□ 2.87
LSM7-204ENST00000587502 CPDO75976 1380 aa32.97■■■□□ 2.87
LSM7-204ENST00000587502 SSH2Q76I76 1423 aa32.97■■■□□ 2.87
LSM7-204ENST00000587502 GCP02774 474 aa32.97■■■□□ 2.87
LSM7-204ENST00000587502 CHRNA2Q15822 529 aa32.97■■■□□ 2.87
LSM7-204ENST00000587502 NLRP6P59044 892 aa32.96■■■□□ 2.87
LSM7-204ENST00000587502 TIMELESSQ9UNS1 1208 aa32.96■■■□□ 2.87
LSM7-204ENST00000587502 PUS7Q96PZ0 661 aaKnown RBP32.95■■■□□ 2.87
LSM7-204ENST00000587502 SPATA31A5Q5VU36 1347 aa32.95■■■□□ 2.86
LSM7-204ENST00000587502 SPATA31A7Q8IWB4 1347 aa32.95■■■□□ 2.86
LSM7-204ENST00000587502 NRKQ7Z2Y5 1582 aa32.95■■■□□ 2.86
LSM7-204ENST00000587502 EP400Q96L91 3159 aa32.93■■■□□ 2.86
LSM7-204ENST00000587502 FAM98CQ17RN3 349 aaKnown RBP32.92■■■□□ 2.86
LSM7-204ENST00000587502 TTC21BQ7Z4L5 1316 aa32.92■■■□□ 2.86
LSM7-204ENST00000587502 TTC21AQ8NDW8 1320 aa32.92■■■□□ 2.86
LSM7-204ENST00000587502 CPSF1Q10570 1443 aaKnown RBP32.92■■■□□ 2.86
LSM7-204ENST00000587502 A0A0G2JS52 829 aa32.91■■■□□ 2.86
LSM7-204ENST00000587502 EVA1CP58658 441 aa32.91■■■□□ 2.86
LSM7-204ENST00000587502 MYT1Q01538 1121 aa32.91■■■□□ 2.86
LSM7-204ENST00000587502 AKAP12Q02952 1782 aa32.91■■■□□ 2.86
LSM7-204ENST00000587502 KRT27Q7Z3Y8 459 aa32.9■■■□□ 2.86
LSM7-204ENST00000587502 KTN1Q86UP2 1357 aaKnown RBP32.9■■■□□ 2.86
LSM7-204ENST00000587502 STRN4Q9NRL3 753 aa32.89■■■□□ 2.86
LSM7-204ENST00000587502 BRWD3Q6RI45 1802 aa32.88■■■□□ 2.85
LSM7-204ENST00000587502 ST20-MTHFSA0A0A6YYL1 179 aa32.87■■■□□ 2.85
LSM7-204ENST00000587502 TMC1Q8TDI8 760 aa32.87■■■□□ 2.85
LSM7-204ENST00000587502 SPATA31A1Q5TZJ5 1347 aa32.86■■■□□ 2.85
LSM7-204ENST00000587502 HDGFL2Q7Z4V5 671 aaPredicted RBP32.85■■■□□ 2.85
LSM7-204ENST00000587502 KCNH5Q8NCM2 988 aa32.85■■■□□ 2.85
LSM7-204ENST00000587502 SLIT3O75094 1523 aa32.85■■■□□ 2.85
LSM7-204ENST00000587502 PIK3C2AO00443 1686 aa32.85■■■□□ 2.85
LSM7-204ENST00000587502 TESK2Q96S53 571 aa32.84■■■□□ 2.85
LSM7-204ENST00000587502 TERF2IPQ9NYB0 399 aa32.82■■■□□ 2.84
LSM7-204ENST00000587502 CAMTA1Q9Y6Y1 1673 aa32.82■■■□□ 2.84
LSM7-204ENST00000587502 BLMP54132 1417 aaPredicted RBP32.81■■■□□ 2.84
LSM7-204ENST00000587502 LMO7Q8WWI1 1683 aa32.81■■■□□ 2.84
LSM7-204ENST00000587502 SLC12A5Q9H2X9 1139 aa32.8■■■□□ 2.84
LSM7-204ENST00000587502 AATKQ6ZMQ8 1374 aa32.8■■■□□ 2.84
LSM7-204ENST00000587502 NINLQ9Y2I6 1382 aa32.8■■■□□ 2.84
LSM7-204ENST00000587502 MON2Q7Z3U7 1717 aa32.79■■■□□ 2.84
LSM7-204ENST00000587502 SF3B2Q13435 895 aaKnown RBP32.78■■■□□ 2.84
LSM7-204ENST00000587502 ZBTB7CA1YPR0 619 aa32.77■■■□□ 2.84
LSM7-204ENST00000587502 LARP1Q6PKG0 1096 aaKnown RBP32.77■■■□□ 2.84
LSM7-204ENST00000587502 BARGINQ6ZT62 677 aa32.77■■■□□ 2.84
LSM7-204ENST00000587502 USP47Q96K76 1375 aa32.77■■■□□ 2.84
LSM7-204ENST00000587502 CD163L1Q9NR16 1453 aa32.77■■■□□ 2.84
LSM7-204ENST00000587502 THRAP3Q9Y2W1 955 aaKnown RBP32.76■■■□□ 2.83
LSM7-204ENST00000587502 THSD7AQ9UPZ6 1657 aa32.75■■■□□ 2.83
LSM7-204ENST00000587502 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.75■■■□□ 2.83
LSM7-204ENST00000587502 TCP11L2Q8N4U5 519 aa32.75■■■□□ 2.83
LSM7-204ENST00000587502 USP35Q9P2H5 1018 aa32.75■■■□□ 2.83
LSM7-204ENST00000587502 COL5A2P05997 1499 aaPredicted RBP32.74■■■□□ 2.83
LSM7-204ENST00000587502 TMF1P82094 1093 aa32.74■■■□□ 2.83
LSM7-204ENST00000587502 USP31Q70CQ4 1352 aa32.73■■■□□ 2.83
LSM7-204ENST00000587502 ARHGEF25Q86VW2 580 aa32.73■■■□□ 2.83
LSM7-204ENST00000587502 EDC4Q6P2E9 1401 aaKnown RBP32.73■■■□□ 2.83
LSM7-204ENST00000587502 CCER1Q8TC90 406 aaPredicted RBP32.7■■■□□ 2.83
LSM7-204ENST00000587502 A0A1W2PP64 1363 aa32.7■■■□□ 2.82
LSM7-204ENST00000587502 CDCA8Q53HL2 280 aa32.69■■■□□ 2.82
LSM7-204ENST00000587502 CRB1P82279 1406 aa32.68■■■□□ 2.82
LSM7-204ENST00000587502 SOX12O15370 315 aa32.68■■■□□ 2.82
LSM7-204ENST00000587502 NME9Q86XW9 330 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms