RNA–Protein interactions for RNA: ENST00000587335.1

KRT42P-204, Transcript of keratin 42 pseudogene, humanhuman

TSL 4

Gene KRT42P, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT42P-204ENST00000587335 BTG4Q9NY30 223 aa24.63■■□□□ 1.53
KRT42P-204ENST00000587335 ARHGEF28Q8N1W1 1705 aaKnown RBP24.62■■□□□ 1.53
KRT42P-204ENST00000587335 ONECUT3O60422 494 aaPredicted RBP24.61■■□□□ 1.53
KRT42P-204ENST00000587335 ITSN1Q15811 1721 aa24.61■■□□□ 1.53
KRT42P-204ENST00000587335 COL14A1Q05707 1796 aaKnown RBP24.6■■□□□ 1.53
KRT42P-204ENST00000587335 NRAPQ86VF7 1730 aa24.59■■□□□ 1.53
KRT42P-204ENST00000587335 FAM98CQ17RN3 349 aaKnown RBP24.58■■□□□ 1.53
KRT42P-204ENST00000587335 DEFB132Q7Z7B7 95 aa24.58■■□□□ 1.53
KRT42P-204ENST00000587335 NUDT16Q96DE0 195 aaKnown RBP24.58■■□□□ 1.53
KRT42P-204ENST00000587335 PRDM11Q9NQV5 511 aa24.57■■□□□ 1.52
KRT42P-204ENST00000587335 ATP7BP35670 1465 aa24.57■■□□□ 1.52
KRT42P-204ENST00000587335 CDK19Q9BWU1 502 aa24.54■■□□□ 1.52
KRT42P-204ENST00000587335 CRYBG1Q9Y4K1 1723 aa24.53■■□□□ 1.52
KRT42P-204ENST00000587335 SPATA31A5Q5VU36 1347 aa24.51■■□□□ 1.51
KRT42P-204ENST00000587335 SPATA31A7Q8IWB4 1347 aa24.51■■□□□ 1.51
KRT42P-204ENST00000587335 KIAA1210Q9ULL0 1709 aa24.5■■□□□ 1.51
KRT42P-204ENST00000587335 BAG6P46379 1132 aa24.49■■□□□ 1.51
KRT42P-204ENST00000587335 KIAA0232Q92628 1395 aa24.49■■□□□ 1.51
KRT42P-204ENST00000587335 NUTM2GQ5VZR2 741 aa24.48■■□□□ 1.51
KRT42P-204ENST00000587335 CCDC61Q9Y6R9 512 aa24.48■■□□□ 1.51
KRT42P-204ENST00000587335 ACEP12821 1306 aa24.47■■□□□ 1.51
KRT42P-204ENST00000587335 TOPAZ1Q8N9V7 1692 aa24.46■■□□□ 1.51
KRT42P-204ENST00000587335 PHRF1Q9P1Y6 1649 aaKnown RBP24.46■■□□□ 1.51
KRT42P-204ENST00000587335 POLR3AO14802 1390 aaPredicted RBP24.46■■□□□ 1.51
KRT42P-204ENST00000587335 CHRNA2Q15822 529 aa24.46■■□□□ 1.51
KRT42P-204ENST00000587335 NBPF8Q3BBV2 869 aa24.46■■□□□ 1.51
KRT42P-204ENST00000587335 STRN4Q9NRL3 753 aa24.46■■□□□ 1.51
KRT42P-204ENST00000587335 ZC3H6P61129 1189 aaKnown RBP24.45■■□□□ 1.5
KRT42P-204ENST00000587335 NBPF1Q3BBV0 1214 aa24.44■■□□□ 1.5
KRT42P-204ENST00000587335 FAM182BQ5T319 152 aa24.44■■□□□ 1.5
KRT42P-204ENST00000587335 SRPK2P78362 688 aaKnown RBP24.43■■□□□ 1.5
KRT42P-204ENST00000587335 PLEKHG3A1L390 1219 aa24.42■■□□□ 1.5
KRT42P-204ENST00000587335 ABTB2Q8N961 1025 aa24.42■■□□□ 1.5
KRT42P-204ENST00000587335 THSD7AQ9UPZ6 1657 aa24.42■■□□□ 1.5
KRT42P-204ENST00000587335 RGPD1P0DJD0 1748 aa24.41■■□□□ 1.5
KRT42P-204ENST00000587335 SPATA31A1Q5TZJ5 1347 aa24.41■■□□□ 1.5
KRT42P-204ENST00000587335 CENPJQ9HC77 1338 aaPredicted RBP24.4■■□□□ 1.5
KRT42P-204ENST00000587335 EVA1CP58658 441 aa24.4■■□□□ 1.5
KRT42P-204ENST00000587335 USP35Q9P2H5 1018 aa24.39■■□□□ 1.49
KRT42P-204ENST00000587335 PPIP5K1Q6PFW1 1433 aa24.38■■□□□ 1.49
KRT42P-204ENST00000587335 EN1Q05925 392 aaPredicted RBP24.37■■□□□ 1.49
KRT42P-204ENST00000587335 NRKQ7Z2Y5 1582 aa24.37■■□□□ 1.49
KRT42P-204ENST00000587335 PSDA5PKW4 1024 aaPredicted RBP24.36■■□□□ 1.49
KRT42P-204ENST00000587335 CABP2Q9NPB3 220 aa24.36■■□□□ 1.49
KRT42P-204ENST00000587335 NLRP13Q86W25 1043 aa24.35■■□□□ 1.49
KRT42P-204ENST00000587335 SSH2Q76I76 1423 aa24.35■■□□□ 1.49
KRT42P-204ENST00000587335 QRICH2Q9H0J4 1663 aa24.34■■□□□ 1.49
KRT42P-204ENST00000587335 FAM196AQ6ZSG2 479 aa24.34■■□□□ 1.49
KRT42P-204ENST00000587335 USP19O94966 1318 aa24.33■■□□□ 1.48
KRT42P-204ENST00000587335 CPDO75976 1380 aa24.32■■□□□ 1.48
KRT42P-204ENST00000587335 TNS1Q9HBL0 1735 aaKnown RBP24.32■■□□□ 1.48
KRT42P-204ENST00000587335 LRP5O75197 1615 aa24.32■■□□□ 1.48
KRT42P-204ENST00000587335 CAMTA1Q9Y6Y1 1673 aa24.31■■□□□ 1.48
KRT42P-204ENST00000587335 DISP2A7MBM2 1401 aa24.31■■□□□ 1.48
KRT42P-204ENST00000587335 PDE3BQ13370 1112 aa24.31■■□□□ 1.48
KRT42P-204ENST00000587335 BRD4O60885 1362 aaPredicted RBP24.3■■□□□ 1.48
KRT42P-204ENST00000587335 TRIM37O94972 964 aa24.3■■□□□ 1.48
KRT42P-204ENST00000587335 GCP02774 474 aa24.3■■□□□ 1.48
KRT42P-204ENST00000587335 LARP1Q6PKG0 1096 aaKnown RBP24.3■■□□□ 1.48
KRT42P-204ENST00000587335 BARGINQ6ZT62 677 aa24.3■■□□□ 1.48
KRT42P-204ENST00000587335 L3MBTL2Q969R5 705 aa24.3■■□□□ 1.48
KRT42P-204ENST00000587335 LMO7Q8WWI1 1683 aa24.28■■□□□ 1.48
KRT42P-204ENST00000587335 ZBTB7CA1YPR0 619 aa24.28■■□□□ 1.48
KRT42P-204ENST00000587335 TCP11L2Q8N4U5 519 aa24.28■■□□□ 1.48
KRT42P-204ENST00000587335 CABP1Q9NZU7 370 aa24.28■■□□□ 1.48
KRT42P-204ENST00000587335 R3HDM1Q15032 1099 aaKnown RBP24.27■■□□□ 1.48
KRT42P-204ENST00000587335 EZH2Q15910 746 aaKnown RBP24.27■■□□□ 1.48
KRT42P-204ENST00000587335 APBA3O96018 575 aa24.26■■□□□ 1.47
KRT42P-204ENST00000587335 NLRP6P59044 892 aa24.26■■□□□ 1.47
KRT42P-204ENST00000587335 EVC2Q86UK5 1308 aa24.26■■□□□ 1.47
KRT42P-204ENST00000587335 USP6P35125 1406 aa24.26■■□□□ 1.47
KRT42P-204ENST00000587335 THRAP3Q9Y2W1 955 aaKnown RBP24.24■■□□□ 1.47
KRT42P-204ENST00000587335 COL5A2P05997 1499 aaPredicted RBP24.23■■□□□ 1.47
KRT42P-204ENST00000587335 TRPM1Q7Z4N2 1603 aa24.22■■□□□ 1.47
KRT42P-204ENST00000587335 ROCK2O75116 1388 aaKnown RBP24.22■■□□□ 1.47
KRT42P-204ENST00000587335 NEUROD1Q13562 356 aa24.22■■□□□ 1.47
KRT42P-204ENST00000587335 CAMKK2Q96RR4 588 aa24.22■■□□□ 1.47
KRT42P-204ENST00000587335 SIN3AQ96ST3 1273 aa24.22■■□□□ 1.47
KRT42P-204ENST00000587335 PARD3Q8TEW0 1356 aa24.21■■□□□ 1.47
KRT42P-204ENST00000587335 CRB1P82279 1406 aa24.2■■□□□ 1.46
KRT42P-204ENST00000587335 SLIT3O75094 1523 aa24.19■■□□□ 1.46
KRT42P-204ENST00000587335 AATKQ6ZMQ8 1374 aa24.18■■□□□ 1.46
KRT42P-204ENST00000587335 PARP4Q9UKK3 1724 aaKnown RBP24.17■■□□□ 1.46
KRT42P-204ENST00000587335 PIK3C2AO00443 1686 aa24.17■■□□□ 1.46
KRT42P-204ENST00000587335 TOM1L2Q6ZVM7 507 aa24.16■■□□□ 1.46
KRT42P-204ENST00000587335 C11orf95C9JLR9 678 aaPredicted RBP24.15■■□□□ 1.46
KRT42P-204ENST00000587335 ZNF692Q9BU19 519 aaPredicted RBP24.15■■□□□ 1.46
KRT42P-204ENST00000587335 NBPF14Q5TI25 921 aa24.13■■□□□ 1.45
KRT42P-204ENST00000587335 TTC21BQ7Z4L5 1316 aa24.12■■□□□ 1.45
KRT42P-204ENST00000587335 OVOS2A0A0G2JMS6 1433 aa24.12■■□□□ 1.45
KRT42P-204ENST00000587335 OVOS2A0A0J9YW53 1432 aa24.12■■□□□ 1.45
KRT42P-204ENST00000587335 OVOS2Q6IE36 1432 aa24.12■■□□□ 1.45
KRT42P-204ENST00000587335 SOX12O15370 315 aa24.12■■□□□ 1.45
KRT42P-204ENST00000587335 KCNH5Q8NCM2 988 aa24.12■■□□□ 1.45
KRT42P-204ENST00000587335 RREB1Q92766 1687 aa24.11■■□□□ 1.45
KRT42P-204ENST00000587335 CPSF1Q10570 1443 aaKnown RBP24.11■■□□□ 1.45
KRT42P-204ENST00000587335 DDB1Q16531 1140 aa24.11■■□□□ 1.45
KRT42P-204ENST00000587335 TTC21AQ8NDW8 1320 aa24.1■■□□□ 1.45
KRT42P-204ENST00000587335 AKAP12Q02952 1782 aa24.1■■□□□ 1.45
KRT42P-204ENST00000587335 NUP188Q5SRE5 1749 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms