RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 CNGB1Q14028 1251 aaPredicted RBP20.43■□□□□ 0.86
NFIX-208ENST00000587260 PHLPP1O60346 1717 aa20.42■□□□□ 0.86
NFIX-208ENST00000587260 AHDC1Q5TGY3 1603 aaPredicted RBP20.42■□□□□ 0.86
NFIX-208ENST00000587260 NPHP3Q7Z494 1330 aa20.42■□□□□ 0.86
NFIX-208ENST00000587260 ANKRD26Q9UPS8 1709 aa20.42■□□□□ 0.86
NFIX-208ENST00000587260 ANP32CO43423 234 aa20.42■□□□□ 0.86
NFIX-208ENST00000587260 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.42■□□□□ 0.86
NFIX-208ENST00000587260 MIER1Q8N108 512 aa20.42■□□□□ 0.86
NFIX-208ENST00000587260 ZNF692Q9BU19 519 aaPredicted RBP20.42■□□□□ 0.86
NFIX-208ENST00000587260 KNSTRNQ9Y448 316 aa20.41■□□□□ 0.86
NFIX-208ENST00000587260 SSH2Q76I76 1423 aa20.41■□□□□ 0.86
NFIX-208ENST00000587260 ALS2Q96Q42 1657 aa20.4■□□□□ 0.86
NFIX-208ENST00000587260 PAK3O75914 559 aaPredicted RBP20.39■□□□□ 0.85
NFIX-208ENST00000587260 NPC1L1Q9UHC9 1359 aa20.39■□□□□ 0.85
NFIX-208ENST00000587260 KRT28Q7Z3Y7 464 aa20.38■□□□□ 0.85
NFIX-208ENST00000587260 TTC21BQ7Z4L5 1316 aa20.38■□□□□ 0.85
NFIX-208ENST00000587260 MARF1Q9Y4F3 1742 aaKnown RBP20.37■□□□□ 0.85
NFIX-208ENST00000587260 CGNL1Q0VF96 1302 aa20.37■□□□□ 0.85
NFIX-208ENST00000587260 COL16A1Q07092 1604 aaPredicted RBP20.37■□□□□ 0.85
NFIX-208ENST00000587260 PRKRIP1Q9H875 184 aaPredicted RBP20.37■□□□□ 0.85
NFIX-208ENST00000587260 AMER1Q5JTC6 1135 aaPredicted RBP20.36■□□□□ 0.85
NFIX-208ENST00000587260 CC2D1BQ5T0F9 858 aaKnown RBP20.36■□□□□ 0.85
NFIX-208ENST00000587260 NME9Q86XW9 330 aa20.36■□□□□ 0.85
NFIX-208ENST00000587260 TNS3Q68CZ2 1445 aa20.35■□□□□ 0.85
NFIX-208ENST00000587260 TTC21AQ8NDW8 1320 aa20.35■□□□□ 0.85
NFIX-208ENST00000587260 USP54Q70EL1 1684 aa20.35■□□□□ 0.85
NFIX-208ENST00000587260 GGNBP2Q9H3C7 697 aa20.34■□□□□ 0.85
NFIX-208ENST00000587260 SOS2Q07890 1332 aaPredicted RBP20.34■□□□□ 0.85
NFIX-208ENST00000587260 BRD4O60885 1362 aaPredicted RBP20.34■□□□□ 0.85
NFIX-208ENST00000587260 LMOD2Q6P5Q4 547 aa20.33■□□□□ 0.85
NFIX-208ENST00000587260 ZRANB1Q9UGI0 708 aa20.33■□□□□ 0.85
NFIX-208ENST00000587260 SBNO1A3KN83 1393 aa20.33■□□□□ 0.84
NFIX-208ENST00000587260 NUTM2GQ5VZR2 741 aa20.32■□□□□ 0.84
NFIX-208ENST00000587260 NSD2O96028 1365 aa20.32■□□□□ 0.84
NFIX-208ENST00000587260 FYB1O15117 783 aa20.32■□□□□ 0.84
NFIX-208ENST00000587260 RALBP1Q15311 655 aa20.32■□□□□ 0.84
NFIX-208ENST00000587260 OVOS2A0A0J9YW53 1432 aa20.31■□□□□ 0.84
NFIX-208ENST00000587260 OVOS2Q6IE36 1432 aa20.31■□□□□ 0.84
NFIX-208ENST00000587260 ABTB2Q8N961 1025 aa20.31■□□□□ 0.84
NFIX-208ENST00000587260 PARD3Q8TEW0 1356 aa20.3■□□□□ 0.84
NFIX-208ENST00000587260 PHRF1Q9P1Y6 1649 aaKnown RBP20.3■□□□□ 0.84
NFIX-208ENST00000587260 ABCA3Q99758 1704 aa20.3■□□□□ 0.84
NFIX-208ENST00000587260 CRYBG1Q9Y4K1 1723 aa20.3■□□□□ 0.84
NFIX-208ENST00000587260 CCER2I3L3R5 266 aa20.3■□□□□ 0.84
NFIX-208ENST00000587260 PLEKHG5O94827 1062 aa20.3■□□□□ 0.84
NFIX-208ENST00000587260 SPATA31A3Q5VYP0 1347 aa20.29■□□□□ 0.84
NFIX-208ENST00000587260 MED1Q15648 1581 aaPredicted RBP20.27■□□□□ 0.84
NFIX-208ENST00000587260 NLRP6P59044 892 aa20.27■□□□□ 0.83
NFIX-208ENST00000587260 COG3Q96JB2 828 aa20.27■□□□□ 0.83
NFIX-208ENST00000587260 ARHGEF10O15013 1369 aa20.27■□□□□ 0.83
NFIX-208ENST00000587260 USP31Q70CQ4 1352 aa20.26■□□□□ 0.83
NFIX-208ENST00000587260 COL22A1Q8NFW1 1626 aaPredicted RBP20.26■□□□□ 0.83
NFIX-208ENST00000587260 SOX12O15370 315 aa20.25■□□□□ 0.83
NFIX-208ENST00000587260 TNNT2P45379 298 aaPredicted RBP20.25■□□□□ 0.83
NFIX-208ENST00000587260 MORC1Q86VD1 984 aa20.25■□□□□ 0.83
NFIX-208ENST00000587260 SLIT3O75094 1523 aa20.24■□□□□ 0.83
NFIX-208ENST00000587260 SHPRHQ149N8 1683 aa20.24■□□□□ 0.83
NFIX-208ENST00000587260 LTN1O94822 1766 aa20.23■□□□□ 0.83
NFIX-208ENST00000587260 MYBBP1AQ9BQG0 1328 aaKnown RBP20.23■□□□□ 0.83
NFIX-208ENST00000587260 NLRP13Q86W25 1043 aa20.22■□□□□ 0.83
NFIX-208ENST00000587260 LRRC59Q96AG4 307 aaKnown RBP20.22■□□□□ 0.83
NFIX-208ENST00000587260 PHF23Q9BUL5 403 aaPredicted RBP20.22■□□□□ 0.83
NFIX-208ENST00000587260 PNPLA6Q8IY17 1366 aa20.22■□□□□ 0.83
NFIX-208ENST00000587260 HSPA1LP34931 641 aa20.22■□□□□ 0.83
NFIX-208ENST00000587260 MAP2P11137 1827 aaKnown RBP20.22■□□□□ 0.83
NFIX-208ENST00000587260 NFAT5O94916 1531 aa20.21■□□□□ 0.83
NFIX-208ENST00000587260 USP19O94966 1318 aa20.2■□□□□ 0.82
NFIX-208ENST00000587260 CABLES1Q8TDN4 633 aa20.2■□□□□ 0.82
NFIX-208ENST00000587260 FBLN1P23142 703 aa20.19■□□□□ 0.82
NFIX-208ENST00000587260 PEAK1Q9H792 1746 aa20.16■□□□□ 0.82
NFIX-208ENST00000587260 PPP2R1AP30153 589 aa20.15■□□□□ 0.82
NFIX-208ENST00000587260 HAP1P54257 671 aaPredicted RBP20.15■□□□□ 0.82
NFIX-208ENST00000587260 RRS1Q15050 365 aaKnown RBP20.15■□□□□ 0.82
NFIX-208ENST00000587260 JCADQ9P266 1359 aa20.15■□□□□ 0.82
NFIX-208ENST00000587260 GCP02774 474 aa20.14■□□□□ 0.81
NFIX-208ENST00000587260 AATKQ6ZMQ8 1374 aa20.13■□□□□ 0.81
NFIX-208ENST00000587260 ZBTB7CA1YPR0 619 aa20.13■□□□□ 0.81
NFIX-208ENST00000587260 KCNH5Q8NCM2 988 aa20.13■□□□□ 0.81
NFIX-208ENST00000587260 EMILIN1Q9Y6C2 1016 aa20.12■□□□□ 0.81
NFIX-208ENST00000587260 ZC3H6P61129 1189 aaKnown RBP20.12■□□□□ 0.81
NFIX-208ENST00000587260 CCDC184Q52MB2 194 aa20.12■□□□□ 0.81
NFIX-208ENST00000587260 SMG6Q86US8 1419 aaKnown RBP20.12■□□□□ 0.81
NFIX-208ENST00000587260 PPM1GO15355 546 aaPredicted RBP20.11■□□□□ 0.81
NFIX-208ENST00000587260 MRS2Q9HD23 443 aa20.11■□□□□ 0.81
NFIX-208ENST00000587260 MAP3K19Q56UN5 1328 aa20.1■□□□□ 0.81
NFIX-208ENST00000587260 RGPD5Q99666 1765 aa20.1■□□□□ 0.81
NFIX-208ENST00000587260 POLKQ9UBT6 870 aa20.1■□□□□ 0.81
NFIX-208ENST00000587260 CDK12Q9NYV4 1490 aaPredicted RBP20.09■□□□□ 0.81
NFIX-208ENST00000587260 NUTM2BA6NNL0 878 aaPredicted RBP20.09■□□□□ 0.81
NFIX-208ENST00000587260 NUTM2EB1AL46 878 aaPredicted RBP20.09■□□□□ 0.81
NFIX-208ENST00000587260 MTHFSP49914 203 aa20.09■□□□□ 0.81
NFIX-208ENST00000587260 NUTM2AQ8IVF1 878 aaPredicted RBP20.09■□□□□ 0.81
NFIX-208ENST00000587260 KIAA0232Q92628 1395 aa20.09■□□□□ 0.81
NFIX-208ENST00000587260 COL18A1P39060 1754 aa20.08■□□□□ 0.8
NFIX-208ENST00000587260 LRP6O75581 1613 aa20.07■□□□□ 0.8
NFIX-208ENST00000587260 PLCH1Q4KWH8 1693 aa20.07■□□□□ 0.8
NFIX-208ENST00000587260 LMO7Q8WWI1 1683 aa20.06■□□□□ 0.8
NFIX-208ENST00000587260 AMPHP49418 695 aa20.06■□□□□ 0.8
NFIX-208ENST00000587260 CPDO75976 1380 aa20.06■□□□□ 0.8
NFIX-208ENST00000587260 FLT4P35916 1363 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms