RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 PSDA5PKW4 1024 aaPredicted RBP11.44□□□□□ -0.58
VMP1-204ENST00000587259 FAM83GA6ND36 823 aa11.44□□□□□ -0.58
VMP1-204ENST00000587259 MYT1Q01538 1121 aa11.44□□□□□ -0.58
VMP1-204ENST00000587259 CCDC125Q86Z20 511 aa11.44□□□□□ -0.58
VMP1-204ENST00000587259 KIF1AQ12756 1690 aa11.43□□□□□ -0.58
VMP1-204ENST00000587259 PLCH1Q4KWH8 1693 aa11.43□□□□□ -0.58
VMP1-204ENST00000587259 VPS72Q15906 364 aa11.43□□□□□ -0.58
VMP1-204ENST00000587259 C14orf93Q9H972 538 aaKnown RBP11.43□□□□□ -0.58
VMP1-204ENST00000587259 PSME1Q06323 249 aa11.42□□□□□ -0.58
VMP1-204ENST00000587259 FAM98CQ17RN3 349 aaKnown RBP11.42□□□□□ -0.58
VMP1-204ENST00000587259 CCER1Q8TC90 406 aaPredicted RBP11.42□□□□□ -0.58
VMP1-204ENST00000587259 ABCA3Q99758 1704 aa11.42□□□□□ -0.58
VMP1-204ENST00000587259 NRXN1Q9ULB1 1477 aa11.42□□□□□ -0.58
VMP1-204ENST00000587259 MINK1Q8N4C8 1332 aaPredicted RBP11.41□□□□□ -0.58
VMP1-204ENST00000587259 KRT27Q7Z3Y8 459 aa11.41□□□□□ -0.58
VMP1-204ENST00000587259 TRAK1Q9UPV9 953 aa11.41□□□□□ -0.58
VMP1-204ENST00000587259 DHX57Q6P158 1386 aaKnown RBP11.41□□□□□ -0.58
VMP1-204ENST00000587259 PRR36Q9H6K5 1346 aa11.4□□□□□ -0.58
VMP1-204ENST00000587259 CLSPNQ9HAW4 1339 aa11.4□□□□□ -0.58
VMP1-204ENST00000587259 SF3B2Q13435 895 aaKnown RBP11.4□□□□□ -0.58
VMP1-204ENST00000587259 BTG4Q9NY30 223 aa11.4□□□□□ -0.58
VMP1-204ENST00000587259 POGKQ9P215 609 aa11.4□□□□□ -0.58
VMP1-204ENST00000587259 KDM2AQ9Y2K7 1162 aa11.39□□□□□ -0.59
VMP1-204ENST00000587259 SBNO1A3KN83 1393 aa11.39□□□□□ -0.59
VMP1-204ENST00000587259 ACIN1Q9UKV3 1341 aaKnown RBP11.38□□□□□ -0.59
VMP1-204ENST00000587259 ONECUT3O60422 494 aaPredicted RBP11.38□□□□□ -0.59
VMP1-204ENST00000587259 EN1Q05925 392 aaPredicted RBP11.38□□□□□ -0.59
VMP1-204ENST00000587259 SIRT1Q96EB6 747 aa11.38□□□□□ -0.59
VMP1-204ENST00000587259 ARHGEF10O15013 1369 aa11.37□□□□□ -0.59
VMP1-204ENST00000587259 NRAPQ86VF7 1730 aa11.37□□□□□ -0.59
VMP1-204ENST00000587259 TRPM3Q9HCF6 1732 aaPredicted RBP11.37□□□□□ -0.59
VMP1-204ENST00000587259 NWD2Q9ULI1 1742 aa11.37□□□□□ -0.59
VMP1-204ENST00000587259 PAK3O75914 559 aaPredicted RBP11.36□□□□□ -0.59
VMP1-204ENST00000587259 CHRNA2Q15822 529 aa11.36□□□□□ -0.59
VMP1-204ENST00000587259 NUTM2GQ5VZR2 741 aa11.36□□□□□ -0.59
VMP1-204ENST00000587259 ADGRB1O14514 1584 aa11.36□□□□□ -0.59
VMP1-204ENST00000587259 BAG6P46379 1132 aa11.34□□□□□ -0.59
VMP1-204ENST00000587259 R3HDM1Q15032 1099 aaKnown RBP11.34□□□□□ -0.59
VMP1-204ENST00000587259 DLC1Q96QB1 1528 aa11.34□□□□□ -0.59
VMP1-204ENST00000587259 ANKARQ7Z5J8 1434 aa11.34□□□□□ -0.59
VMP1-204ENST00000587259 SPATA31A5Q5VU36 1347 aa11.34□□□□□ -0.59
VMP1-204ENST00000587259 SPATA31A7Q8IWB4 1347 aa11.34□□□□□ -0.59
VMP1-204ENST00000587259 ALS2Q96Q42 1657 aa11.33□□□□□ -0.6
VMP1-204ENST00000587259 RAB3GAP2Q9H2M9 1393 aa11.33□□□□□ -0.6
VMP1-204ENST00000587259 EZH2Q15910 746 aaKnown RBP11.33□□□□□ -0.6
VMP1-204ENST00000587259 NGDNQ8NEJ9 315 aaKnown RBP11.33□□□□□ -0.6
VMP1-204ENST00000587259 DCAF11Q8TEB1 546 aa11.33□□□□□ -0.6
VMP1-204ENST00000587259 STRN4Q9NRL3 753 aa11.33□□□□□ -0.6
VMP1-204ENST00000587259 ADGRB2O60241 1585 aa11.33□□□□□ -0.6
VMP1-204ENST00000587259 GPRASP1Q5JY77 1395 aa11.32□□□□□ -0.6
VMP1-204ENST00000587259 WASLO00401 505 aaPredicted RBP11.32□□□□□ -0.6
VMP1-204ENST00000587259 ZC3H6P61129 1189 aaKnown RBP11.32□□□□□ -0.6
VMP1-204ENST00000587259 PRDM11Q9NQV5 511 aa11.32□□□□□ -0.6
VMP1-204ENST00000587259 USP35Q9P2H5 1018 aa11.32□□□□□ -0.6
VMP1-204ENST00000587259 LRP5O75197 1615 aa11.31□□□□□ -0.6
VMP1-204ENST00000587259 COL14A1Q05707 1796 aaKnown RBP11.31□□□□□ -0.6
VMP1-204ENST00000587259 KIAA0232Q92628 1395 aa11.31□□□□□ -0.6
VMP1-204ENST00000587259 TULP4Q9NRJ4 1543 aa11.31□□□□□ -0.6
VMP1-204ENST00000587259 TRIM37O94972 964 aa11.31□□□□□ -0.6
VMP1-204ENST00000587259 CRYBG1Q9Y4K1 1723 aa11.31□□□□□ -0.6
VMP1-204ENST00000587259 CHRDL2Q6WN34 429 aa11.3□□□□□ -0.6
VMP1-204ENST00000587259 AKT1S1Q96B36 256 aa11.3□□□□□ -0.6
VMP1-204ENST00000587259 THSD7AQ9UPZ6 1657 aa11.3□□□□□ -0.6
VMP1-204ENST00000587259 NUDT16Q96DE0 195 aaKnown RBP11.29□□□□□ -0.6
VMP1-204ENST00000587259 TNS1Q9HBL0 1735 aaKnown RBP11.29□□□□□ -0.6
VMP1-204ENST00000587259 ATP7BP35670 1465 aa11.28□□□□□ -0.6
VMP1-204ENST00000587259 SPATA31A1Q5TZJ5 1347 aa11.28□□□□□ -0.6
VMP1-204ENST00000587259 RGPD1P0DJD0 1748 aa11.27□□□□□ -0.61
VMP1-204ENST00000587259 CDK19Q9BWU1 502 aa11.27□□□□□ -0.61
VMP1-204ENST00000587259 APBA3O96018 575 aa11.26□□□□□ -0.61
VMP1-204ENST00000587259 LARP1Q6PKG0 1096 aaKnown RBP11.26□□□□□ -0.61
VMP1-204ENST00000587259 CAMKK2Q96RR4 588 aa11.26□□□□□ -0.61
VMP1-204ENST00000587259 PHRF1Q9P1Y6 1649 aaKnown RBP11.26□□□□□ -0.61
VMP1-204ENST00000587259 ARHGEF28Q8N1W1 1705 aaKnown RBP11.26□□□□□ -0.61
VMP1-204ENST00000587259 REM2Q8IYK8 340 aaPredicted RBP11.25□□□□□ -0.61
VMP1-204ENST00000587259 ACEP12821 1306 aa11.25□□□□□ -0.61
VMP1-204ENST00000587259 EIF3AQ14152 1382 aaKnown RBP11.25□□□□□ -0.61
VMP1-204ENST00000587259 ZBTB7CA1YPR0 619 aa11.24□□□□□ -0.61
VMP1-204ENST00000587259 NBPF1Q3BBV0 1214 aa11.24□□□□□ -0.61
VMP1-204ENST00000587259 SSH2Q76I76 1423 aa11.24□□□□□ -0.61
VMP1-204ENST00000587259 CAMTA1Q9Y6Y1 1673 aa11.24□□□□□ -0.61
VMP1-204ENST00000587259 EVA1CP58658 441 aa11.23□□□□□ -0.61
VMP1-204ENST00000587259 MKRN4PQ13434 485 aaPredicted RBP11.23□□□□□ -0.61
VMP1-204ENST00000587259 NBPF8Q3BBV2 869 aa11.23□□□□□ -0.61
VMP1-204ENST00000587259 DISP2A7MBM2 1401 aa11.23□□□□□ -0.61
VMP1-204ENST00000587259 FAM196AQ6ZSG2 479 aa11.22□□□□□ -0.61
VMP1-204ENST00000587259 NRKQ7Z2Y5 1582 aa11.22□□□□□ -0.61
VMP1-204ENST00000587259 ABTB2Q8N961 1025 aa11.22□□□□□ -0.61
VMP1-204ENST00000587259 POLR3AO14802 1390 aaPredicted RBP11.21□□□□□ -0.61
VMP1-204ENST00000587259 PDE3BQ13370 1112 aa11.21□□□□□ -0.61
VMP1-204ENST00000587259 PTF1AQ7RTS3 328 aa11.21□□□□□ -0.61
VMP1-204ENST00000587259 CABP2Q9NPB3 220 aa11.21□□□□□ -0.61
VMP1-204ENST00000587259 ITSN1Q15811 1721 aa11.21□□□□□ -0.62
VMP1-204ENST00000587259 TOPAZ1Q8N9V7 1692 aa11.2□□□□□ -0.62
VMP1-204ENST00000587259 NUP188Q5SRE5 1749 aa11.19□□□□□ -0.62
VMP1-204ENST00000587259 BARGINQ6ZT62 677 aa11.19□□□□□ -0.62
VMP1-204ENST00000587259 TCP11L2Q8N4U5 519 aa11.19□□□□□ -0.62
VMP1-204ENST00000587259 CCDC61Q9Y6R9 512 aa11.19□□□□□ -0.62
VMP1-204ENST00000587259 LMO7Q8WWI1 1683 aa11.19□□□□□ -0.62
VMP1-204ENST00000587259 USP19O94966 1318 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms