RNA–Protein interactions for RNA: ENST00000587165.1

LINC01140-208, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 426 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-208ENST00000587165 CCDC9Q9Y3X0 531 aaKnown RBP7.21□□□□□ -1.26
LINC01140-208ENST00000587165 ITSN1Q15811 1721 aa7.21□□□□□ -1.26
LINC01140-208ENST00000587165 SBNO2Q9Y2G9 1366 aa7.2□□□□□ -1.26
LINC01140-208ENST00000587165 TRPM1Q7Z4N2 1603 aa7.2□□□□□ -1.26
LINC01140-208ENST00000587165 NLRP13Q86W25 1043 aa7.2□□□□□ -1.26
LINC01140-208ENST00000587165 ABTB2Q8N961 1025 aa7.2□□□□□ -1.26
LINC01140-208ENST00000587165 USP32Q8NFA0 1604 aa7.19□□□□□ -1.26
LINC01140-208ENST00000587165 ATRNO75882 1429 aa7.19□□□□□ -1.26
LINC01140-208ENST00000587165 ZNF692Q9BU19 519 aaPredicted RBP7.19□□□□□ -1.26
LINC01140-208ENST00000587165 CABP1Q9NZU7 370 aa7.19□□□□□ -1.26
LINC01140-208ENST00000587165 QRICH2Q9H0J4 1663 aa7.19□□□□□ -1.26
LINC01140-208ENST00000587165 A0A0G2JS52 829 aa7.18□□□□□ -1.26
LINC01140-208ENST00000587165 MYT1Q01538 1121 aa7.18□□□□□ -1.26
LINC01140-208ENST00000587165 VPS72Q15906 364 aa7.18□□□□□ -1.26
LINC01140-208ENST00000587165 CDCA8Q53HL2 280 aa7.18□□□□□ -1.26
LINC01140-208ENST00000587165 NUTM2GQ5VZR2 741 aa7.18□□□□□ -1.26
LINC01140-208ENST00000587165 HDGFL2Q7Z4V5 671 aaPredicted RBP7.18□□□□□ -1.26
LINC01140-208ENST00000587165 TMC1Q8TDI8 760 aa7.18□□□□□ -1.26
LINC01140-208ENST00000587165 GJD4Q96KN9 370 aaPredicted RBP7.18□□□□□ -1.26
LINC01140-208ENST00000587165 RGS12O14924 1447 aa7.18□□□□□ -1.26
LINC01140-208ENST00000587165 SLIT2O94813 1529 aa7.17□□□□□ -1.26
LINC01140-208ENST00000587165 PUS7Q96PZ0 661 aaKnown RBP7.17□□□□□ -1.26
LINC01140-208ENST00000587165 BTG4Q9NY30 223 aa7.17□□□□□ -1.26
LINC01140-208ENST00000587165 TERF2IPQ9NYB0 399 aa7.17□□□□□ -1.26
LINC01140-208ENST00000587165 RGPD8O14715 1765 aaPredicted RBP7.17□□□□□ -1.26
LINC01140-208ENST00000587165 NINLQ9Y2I6 1382 aa7.17□□□□□ -1.26
LINC01140-208ENST00000587165 USP6P35125 1406 aa7.17□□□□□ -1.26
LINC01140-208ENST00000587165 BCL9LQ86UU0 1499 aa7.17□□□□□ -1.26
LINC01140-208ENST00000587165 TOPAZ1Q8N9V7 1692 aa7.16□□□□□ -1.26
LINC01140-208ENST00000587165 FAM83GA6ND36 823 aa7.16□□□□□ -1.26
LINC01140-208ENST00000587165 NLRP6P59044 892 aa7.16□□□□□ -1.26
LINC01140-208ENST00000587165 ZC3H6P61129 1189 aaKnown RBP7.16□□□□□ -1.26
LINC01140-208ENST00000587165 TMF1P82094 1093 aa7.16□□□□□ -1.26
LINC01140-208ENST00000587165 USP19O94966 1318 aa7.16□□□□□ -1.26
LINC01140-208ENST00000587165 TTC21AQ8NDW8 1320 aa7.16□□□□□ -1.26
LINC01140-208ENST00000587165 KTN1Q86UP2 1357 aaKnown RBP7.16□□□□□ -1.26
LINC01140-208ENST00000587165 KIAA0232Q92628 1395 aa7.16□□□□□ -1.26
LINC01140-208ENST00000587165 USP47Q96K76 1375 aa7.16□□□□□ -1.26
LINC01140-208ENST00000587165 TRPM3Q9HCF6 1732 aaPredicted RBP7.15□□□□□ -1.26
LINC01140-208ENST00000587165 ST20-MTHFSA0A0A6YYL1 179 aa7.15□□□□□ -1.26
LINC01140-208ENST00000587165 ZBTB7CA1YPR0 619 aa7.15□□□□□ -1.26
LINC01140-208ENST00000587165 EVA1CP58658 441 aa7.15□□□□□ -1.26
LINC01140-208ENST00000587165 KCNH5Q8NCM2 988 aa7.15□□□□□ -1.26
LINC01140-208ENST00000587165 ALS2Q96Q42 1657 aa7.15□□□□□ -1.27
LINC01140-208ENST00000587165 CPDO75976 1380 aa7.14□□□□□ -1.27
LINC01140-208ENST00000587165 GCP02774 474 aa7.14□□□□□ -1.27
LINC01140-208ENST00000587165 SF3B2Q13435 895 aaKnown RBP7.14□□□□□ -1.27
LINC01140-208ENST00000587165 CHRNA2Q15822 529 aa7.14□□□□□ -1.27
LINC01140-208ENST00000587165 TTC21BQ7Z4L5 1316 aa7.14□□□□□ -1.27
LINC01140-208ENST00000587165 SEPT12Q8IYM1 358 aa7.14□□□□□ -1.27
LINC01140-208ENST00000587165 UPF1Q92900 1129 aaKnown RBP eCLIP7.14□□□□□ -1.27
LINC01140-208ENST00000587165 STRN4Q9NRL3 753 aa7.14□□□□□ -1.27
LINC01140-208ENST00000587165 COL14A1Q05707 1796 aaKnown RBP7.13□□□□□ -1.27
LINC01140-208ENST00000587165 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.13□□□□□ -1.27
LINC01140-208ENST00000587165 MARF1Q9Y4F3 1742 aaKnown RBP7.13□□□□□ -1.27
LINC01140-208ENST00000587165 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.13□□□□□ -1.27
LINC01140-208ENST00000587165 ABCA3Q99758 1704 aa7.13□□□□□ -1.27
LINC01140-208ENST00000587165 NWD2Q9ULI1 1742 aa7.13□□□□□ -1.27
LINC01140-208ENST00000587165 CPSF1Q10570 1443 aaKnown RBP7.12□□□□□ -1.27
LINC01140-208ENST00000587165 EDC4Q6P2E9 1401 aaKnown RBP7.12□□□□□ -1.27
LINC01140-208ENST00000587165 SPATA31A5Q5VU36 1347 aa7.12□□□□□ -1.27
LINC01140-208ENST00000587165 SPATA31A7Q8IWB4 1347 aa7.12□□□□□ -1.27
LINC01140-208ENST00000587165 SOX12O15370 315 aa7.12□□□□□ -1.27
LINC01140-208ENST00000587165 CSB-PGBD3P0DP91 1061 aa7.12□□□□□ -1.27
LINC01140-208ENST00000587165 FAM98CQ17RN3 349 aaKnown RBP7.12□□□□□ -1.27
LINC01140-208ENST00000587165 KRT27Q7Z3Y8 459 aa7.12□□□□□ -1.27
LINC01140-208ENST00000587165 CCDC125Q86Z20 511 aa7.12□□□□□ -1.27
LINC01140-208ENST00000587165 TESK2Q96S53 571 aa7.12□□□□□ -1.27
LINC01140-208ENST00000587165 PLCH1Q4KWH8 1693 aa7.12□□□□□ -1.27
LINC01140-208ENST00000587165 AATKQ6ZMQ8 1374 aa7.11□□□□□ -1.27
LINC01140-208ENST00000587165 EIF4G2P78344 907 aaKnown RBP eCLIP7.11□□□□□ -1.27
LINC01140-208ENST00000587165 TCP11L2Q8N4U5 519 aa7.11□□□□□ -1.27
LINC01140-208ENST00000587165 SLC12A5Q9H2X9 1139 aa7.11□□□□□ -1.27
LINC01140-208ENST00000587165 USP35Q9P2H5 1018 aa7.11□□□□□ -1.27
LINC01140-208ENST00000587165 NRKQ7Z2Y5 1582 aa7.11□□□□□ -1.27
LINC01140-208ENST00000587165 SSH2Q76I76 1423 aa7.1□□□□□ -1.27
LINC01140-208ENST00000587165 A0A1W2PP64 1363 aa7.1□□□□□ -1.27
LINC01140-208ENST00000587165 ANKRD36BQ8N2N9 1353 aa7.1□□□□□ -1.27
LINC01140-208ENST00000587165 SPATA31A1Q5TZJ5 1347 aa7.1□□□□□ -1.27
LINC01140-208ENST00000587165 C11orf95C9JLR9 678 aaPredicted RBP7.1□□□□□ -1.27
LINC01140-208ENST00000587165 ONECUT3O60422 494 aaPredicted RBP7.1□□□□□ -1.27
LINC01140-208ENST00000587165 PDE3BQ13370 1112 aa7.1□□□□□ -1.27
LINC01140-208ENST00000587165 TOM1L2Q6ZVM7 507 aa7.1□□□□□ -1.27
LINC01140-208ENST00000587165 COG3Q96JB2 828 aa7.1□□□□□ -1.27
LINC01140-208ENST00000587165 THRAP3Q9Y2W1 955 aaKnown RBP7.1□□□□□ -1.27
LINC01140-208ENST00000587165 GLI3P10071 1580 aa7.1□□□□□ -1.27
LINC01140-208ENST00000587165 SLIT3O75094 1523 aa7.1□□□□□ -1.27
LINC01140-208ENST00000587165 USP31Q70CQ4 1352 aa7.09□□□□□ -1.27
LINC01140-208ENST00000587165 PHRF1Q9P1Y6 1649 aaKnown RBP7.09□□□□□ -1.27
LINC01140-208ENST00000587165 LARP1Q6PKG0 1096 aaKnown RBP7.09□□□□□ -1.27
LINC01140-208ENST00000587165 BARGINQ6ZT62 677 aa7.09□□□□□ -1.27
LINC01140-208ENST00000587165 NME9Q86XW9 330 aa7.09□□□□□ -1.27
LINC01140-208ENST00000587165 POLR3GLQ9BT43 218 aa7.09□□□□□ -1.27
LINC01140-208ENST00000587165 CDCA7Q9BWT1 371 aaPredicted RBP7.09□□□□□ -1.27
LINC01140-208ENST00000587165 BLMP54132 1417 aaPredicted RBP7.09□□□□□ -1.28
LINC01140-208ENST00000587165 CRB1P82279 1406 aa7.09□□□□□ -1.28
LINC01140-208ENST00000587165 ARHGEF25Q86VW2 580 aa7.08□□□□□ -1.28
LINC01140-208ENST00000587165 NRAPQ86VF7 1730 aa7.07□□□□□ -1.28
LINC01140-208ENST00000587165 CRYBG1Q9Y4K1 1723 aa7.07□□□□□ -1.28
LINC01140-208ENST00000587165 WDR17Q8IZU2 1322 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms